RNA–Protein interactions for RNA: ENST00000378518.5

RER1-204, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-204ENST00000378518 NUTM2EB1AL46 878 aaPredicted RBP27.88■■■□□ 2.05
RER1-204ENST00000378518 CPSF1Q10570 1443 aaKnown RBP27.88■■■□□ 2.05
RER1-204ENST00000378518 NUTM2AQ8IVF1 878 aaPredicted RBP27.88■■■□□ 2.05
RER1-204ENST00000378518 NRKQ7Z2Y5 1582 aa27.87■■■□□ 2.05
RER1-204ENST00000378518 SLC12A5Q9H2X9 1139 aa27.87■■■□□ 2.05
RER1-204ENST00000378518 TERF2IPQ9NYB0 399 aa27.87■■■□□ 2.05
RER1-204ENST00000378518 LRP6O75581 1613 aa27.87■■■□□ 2.05
RER1-204ENST00000378518 ABCA3Q99758 1704 aa27.87■■■□□ 2.05
RER1-204ENST00000378518 KTN1Q86UP2 1357 aaKnown RBP27.86■■■□□ 2.05
RER1-204ENST00000378518 MEX3CQ5U5Q3 659 aaKnown RBP27.86■■■□□ 2.05
RER1-204ENST00000378518 MYOM1P52179 1685 aa27.86■■■□□ 2.05
RER1-204ENST00000378518 MARF1Q9Y4F3 1742 aaKnown RBP27.86■■■□□ 2.05
RER1-204ENST00000378518 CD163L1Q9NR16 1453 aa27.84■■■□□ 2.05
RER1-204ENST00000378518 POLR3GLQ9BT43 218 aa27.83■■■□□ 2.05
RER1-204ENST00000378518 HAP1P54257 671 aaPredicted RBP27.82■■■□□ 2.04
RER1-204ENST00000378518 A0A1W2PP64 1363 aa27.82■■■□□ 2.04
RER1-204ENST00000378518 CRYBG1Q9Y4K1 1723 aa27.81■■■□□ 2.04
RER1-204ENST00000378518 ABTB2Q8N961 1025 aa27.81■■■□□ 2.04
RER1-204ENST00000378518 PHF23Q9BUL5 403 aaPredicted RBP27.8■■■□□ 2.04
RER1-204ENST00000378518 ANKRD36BQ8N2N9 1353 aa27.8■■■□□ 2.04
RER1-204ENST00000378518 SSH2Q76I76 1423 aa27.8■■■□□ 2.04
RER1-204ENST00000378518 PIK3C2AO00443 1686 aa27.79■■■□□ 2.04
RER1-204ENST00000378518 PHRF1Q9P1Y6 1649 aaKnown RBP27.79■■■□□ 2.04
RER1-204ENST00000378518 TTC21AQ8NDW8 1320 aa27.79■■■□□ 2.04
RER1-204ENST00000378518 PLEKHG5O94827 1062 aa27.79■■■□□ 2.04
RER1-204ENST00000378518 EDC4Q6P2E9 1401 aaKnown RBP27.78■■■□□ 2.04
RER1-204ENST00000378518 TTC21BQ7Z4L5 1316 aa27.78■■■□□ 2.04
RER1-204ENST00000378518 ADAMTS2O95450 1211 aa27.76■■■□□ 2.03
RER1-204ENST00000378518 NUTM2GQ5VZR2 741 aa27.75■■■□□ 2.03
RER1-204ENST00000378518 NLRP13Q86W25 1043 aa27.75■■■□□ 2.03
RER1-204ENST00000378518 CABLES1Q8TDN4 633 aa27.75■■■□□ 2.03
RER1-204ENST00000378518 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.72■■■□□ 2.03
RER1-204ENST00000378518 C8orf37Q96NL8 207 aa27.72■■■□□ 2.03
RER1-204ENST00000378518 NLRP6P59044 892 aa27.71■■■□□ 2.03
RER1-204ENST00000378518 USP54Q70EL1 1684 aa27.71■■■□□ 2.03
RER1-204ENST00000378518 C11orf95C9JLR9 678 aaPredicted RBP27.7■■■□□ 2.02
RER1-204ENST00000378518 KIF7Q2M1P5 1343 aa27.69■■■□□ 2.02
RER1-204ENST00000378518 KIF20BQ96Q89 1820 aa27.69■■■□□ 2.02
RER1-204ENST00000378518 USP19O94966 1318 aa27.68■■■□□ 2.02
RER1-204ENST00000378518 NGLY1Q96IV0 654 aa27.68■■■□□ 2.02
RER1-204ENST00000378518 SLIT3O75094 1523 aa27.67■■■□□ 2.02
RER1-204ENST00000378518 PLCH1Q4KWH8 1693 aa27.66■■■□□ 2.02
RER1-204ENST00000378518 COL14A1Q05707 1796 aaKnown RBP27.65■■■□□ 2.02
RER1-204ENST00000378518 AFF2P51816 1311 aa27.65■■■□□ 2.02
RER1-204ENST00000378518 USP31Q70CQ4 1352 aa27.64■■■□□ 2.02
RER1-204ENST00000378518 NME9Q86XW9 330 aa27.64■■■□□ 2.02
RER1-204ENST00000378518 NWD2Q9ULI1 1742 aa27.64■■■□□ 2.01
RER1-204ENST00000378518 ZNF772Q68DY9 489 aaPredicted RBP27.63■■■□□ 2.01
RER1-204ENST00000378518 NSD3Q9BZ95 1437 aa27.63■■■□□ 2.01
RER1-204ENST00000378518 CCDC7Q96M83 1385 aa27.62■■■□□ 2.01
RER1-204ENST00000378518 KCNH5Q8NCM2 988 aa27.61■■■□□ 2.01
RER1-204ENST00000378518 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.61■■■□□ 2.01
RER1-204ENST00000378518 GCP02774 474 aa27.6■■■□□ 2.01
RER1-204ENST00000378518 PRDM11Q9NQV5 511 aa27.59■■■□□ 2.01
RER1-204ENST00000378518 ZC3H6P61129 1189 aaKnown RBP27.58■■■□□ 2.01
RER1-204ENST00000378518 FNBP4Q8N3X1 1017 aaPredicted RBP27.58■■■□□ 2.01
RER1-204ENST00000378518 PANK3Q9H999 370 aa27.58■■■□□ 2.01
RER1-204ENST00000378518 USP21Q9UK80 565 aa27.58■■■□□ 2.01
RER1-204ENST00000378518 WASHC2AQ641Q2 1341 aa27.58■■■□□ 2.01
RER1-204ENST00000378518 KIAA0232Q92628 1395 aa27.58■■■□□ 2.01
RER1-204ENST00000378518 OVOS2A0A0J9YW53 1432 aa27.58■■■□□ 2
RER1-204ENST00000378518 OVOS2Q6IE36 1432 aa27.58■■■□□ 2
RER1-204ENST00000378518 SLIT2O94813 1529 aa27.57■■■□□ 2
RER1-204ENST00000378518 COG3Q96JB2 828 aa27.57■■■□□ 2
RER1-204ENST00000378518 CARD14Q9BXL6 1004 aa27.57■■■□□ 2
RER1-204ENST00000378518 RGS17Q9UGC6 210 aaPredicted RBP27.57■■■□□ 2
RER1-204ENST00000378518 ZRANB1Q9UGI0 708 aa27.57■■■□□ 2
RER1-204ENST00000378518 CPDO75976 1380 aa27.57■■■□□ 2
RER1-204ENST00000378518 FAM83GA6ND36 823 aa27.55■■■□□ 2
RER1-204ENST00000378518 ANKRD26Q9UPS8 1709 aa27.55■■■□□ 2
RER1-204ENST00000378518 LTN1O94822 1766 aa27.54■■■□□ 2
RER1-204ENST00000378518 NFAT5O94916 1531 aa27.54■■■□□ 2
RER1-204ENST00000378518 CGNL1Q0VF96 1302 aa27.54■■■□□ 2
RER1-204ENST00000378518 NRAPQ86VF7 1730 aa27.54■■■□□ 2
RER1-204ENST00000378518 FYB1O15117 783 aa27.53■■■□□ 2
RER1-204ENST00000378518 SOX12O15370 315 aa27.53■■■□□ 2
RER1-204ENST00000378518 BCL9LQ86UU0 1499 aa27.51■■■□□ 2
RER1-204ENST00000378518 ZBTB7CA1YPR0 619 aa27.51■■□□□ 1.99
RER1-204ENST00000378518 GGNBP2Q9H3C7 697 aa27.51■■□□□ 1.99
RER1-204ENST00000378518 LMO7Q8WWI1 1683 aa27.5■■□□□ 1.99
RER1-204ENST00000378518 CHRNA2Q15822 529 aa27.5■■□□□ 1.99
RER1-204ENST00000378518 UNC5CLQ8IV45 518 aa27.5■■□□□ 1.99
RER1-204ENST00000378518 BTG4Q9NY30 223 aa27.5■■□□□ 1.99
RER1-204ENST00000378518 TRPC5Q9UL62 973 aaPredicted RBP27.5■■□□□ 1.99
RER1-204ENST00000378518 POTEAQ6S8J7 498 aa27.48■■□□□ 1.99
RER1-204ENST00000378518 QTRT2Q9H974 415 aaKnown RBP27.48■■□□□ 1.99
RER1-204ENST00000378518 KNSTRNQ9Y448 316 aa27.48■■□□□ 1.99
RER1-204ENST00000378518 ATRNO75882 1429 aa27.47■■□□□ 1.99
RER1-204ENST00000378518 ABCC6O95255 1503 aa27.46■■□□□ 1.99
RER1-204ENST00000378518 COL18A1P39060 1754 aa27.46■■□□□ 1.99
RER1-204ENST00000378518 ARHGEF25Q86VW2 580 aa27.46■■□□□ 1.99
RER1-204ENST00000378518 NSD2O96028 1365 aa27.46■■□□□ 1.99
RER1-204ENST00000378518 AATKQ6ZMQ8 1374 aa27.46■■□□□ 1.99
RER1-204ENST00000378518 RGPD5Q99666 1765 aa27.45■■□□□ 1.98
RER1-204ENST00000378518 CAMTA1Q9Y6Y1 1673 aa27.43■■□□□ 1.98
RER1-204ENST00000378518 RXRBP28702 533 aa27.42■■□□□ 1.98
RER1-204ENST00000378518 EVA1CP58658 441 aa27.41■■□□□ 1.98
RER1-204ENST00000378518 RBM6P78332 1123 aaKnown RBP27.41■■□□□ 1.98
RER1-204ENST00000378518 VPS72Q15906 364 aa27.4■■□□□ 1.98
RER1-204ENST00000378518 STRN4Q9NRL3 753 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms