RNA–Protein interactions for RNA: ENST00000376895.2

SSX3-203, Transcript of SSX family member 3, humanhuman

TSL 5

Gene SSX3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-203ENST00000376895 SOWAHBA6NEL2 793 aa9.26□□□□□ -0.93
SSX3-203ENST00000376895 NR1I2O75469 434 aa9.26□□□□□ -0.93
SSX3-203ENST00000376895 FMNL1O95466 1100 aaPredicted RBP9.26□□□□□ -0.93
SSX3-203ENST00000376895 NR1H3Q13133 447 aa9.26□□□□□ -0.93
SSX3-203ENST00000376895 ZC3H4Q9UPT8 1303 aaKnown RBP9.26□□□□□ -0.93
SSX3-203ENST00000376895 PATL2C9JE40 543 aaKnown RBP9.25□□□□□ -0.93
SSX3-203ENST00000376895 LMOD1P29536 600 aaPredicted RBP9.25□□□□□ -0.93
SSX3-203ENST00000376895 PTPRNQ16849 979 aa9.25□□□□□ -0.93
SSX3-203ENST00000376895 BRICD5Q6PL45 260 aa9.25□□□□□ -0.93
SSX3-203ENST00000376895 TSR3Q9UJK0 312 aaKnown RBP9.25□□□□□ -0.93
SSX3-203ENST00000376895 CC2D2AQ9P2K1 1620 aa9.24□□□□□ -0.93
SSX3-203ENST00000376895 NCAPD3P42695 1498 aa9.24□□□□□ -0.93
SSX3-203ENST00000376895 ZBBXA8MT70 800 aa9.24□□□□□ -0.93
SSX3-203ENST00000376895 F12P00748 615 aaPredicted RBP9.24□□□□□ -0.93
SSX3-203ENST00000376895 JUNDP17535 347 aa9.24□□□□□ -0.93
SSX3-203ENST00000376895 BCAMP50895 628 aa9.24□□□□□ -0.93
SSX3-203ENST00000376895 APLP1P51693 650 aa9.24□□□□□ -0.93
SSX3-203ENST00000376895 FKBPLQ9UIM3 349 aa9.24□□□□□ -0.93
SSX3-203ENST00000376895 FBXO45P0C2W1 286 aa9.23□□□□□ -0.93
SSX3-203ENST00000376895 SRPK2P78362 688 aaKnown RBP9.23□□□□□ -0.93
SSX3-203ENST00000376895 TFIP11Q9UBB9 837 aaKnown RBP9.23□□□□□ -0.93
SSX3-203ENST00000376895 MAFBQ9Y5Q3 323 aaPredicted RBP9.23□□□□□ -0.93
SSX3-203ENST00000376895 POTEB3A0JP26 581 aa9.22□□□□□ -0.93
SSX3-203ENST00000376895 POTEBQ6S5H4 581 aa9.22□□□□□ -0.93
SSX3-203ENST00000376895 SCUBE3Q8IX30 993 aa9.22□□□□□ -0.93
SSX3-203ENST00000376895 BAZ1BQ9UIG0 1483 aaKnown RBP9.21□□□□□ -0.93
SSX3-203ENST00000376895 PEG3Q9GZU2 1588 aa9.21□□□□□ -0.93
SSX3-203ENST00000376895 WIZO95785 1651 aa9.21□□□□□ -0.93
SSX3-203ENST00000376895 ATP9BO43861 1147 aa9.21□□□□□ -0.94
SSX3-203ENST00000376895 WNT2BQ93097 391 aa9.21□□□□□ -0.94
SSX3-203ENST00000376895 THAP11Q96EK4 314 aa9.21□□□□□ -0.94
SSX3-203ENST00000376895 MAP10Q9P2G4 905 aa9.21□□□□□ -0.94
SSX3-203ENST00000376895 MSS51Q4VC12 460 aa9.2□□□□□ -0.94
SSX3-203ENST00000376895 ZNF592Q92610 1267 aa9.2□□□□□ -0.94
SSX3-203ENST00000376895 ATG7O95352 703 aa9.19□□□□□ -0.94
SSX3-203ENST00000376895 BRD1O95696 1058 aa9.19□□□□□ -0.94
SSX3-203ENST00000376895 CTHP32929 405 aa9.19□□□□□ -0.94
SSX3-203ENST00000376895 KCNA1Q09470 495 aa9.19□□□□□ -0.94
SSX3-203ENST00000376895 TMCO4Q5TGY1 634 aa9.19□□□□□ -0.94
SSX3-203ENST00000376895 TBC1D9Q6ZT07 1266 aa9.19□□□□□ -0.94
SSX3-203ENST00000376895 ANKRD13DQ6ZTN6 518 aa9.19□□□□□ -0.94
SSX3-203ENST00000376895 NPM2Q86SE8 214 aaKnown RBP9.19□□□□□ -0.94
SSX3-203ENST00000376895 FAM163AQ96GL9 167 aaPredicted RBP9.19□□□□□ -0.94
SSX3-203ENST00000376895 CCNYL3P0C7X3 344 aa9.18□□□□□ -0.94
SSX3-203ENST00000376895 ARMC2Q8NEN0 867 aa9.18□□□□□ -0.94
SSX3-203ENST00000376895 NFATC2IPQ8NCF5 419 aa9.17□□□□□ -0.94
SSX3-203ENST00000376895 GPKOWQ92917 476 aaPredicted RBP eCLIP9.17□□□□□ -0.94
SSX3-203ENST00000376895 DXOO77932 396 aaKnown RBP9.16□□□□□ -0.94
SSX3-203ENST00000376895 NBPF14Q5TI25 921 aa9.16□□□□□ -0.94
SSX3-203ENST00000376895 SPSB2Q99619 263 aa9.16□□□□□ -0.94
SSX3-203ENST00000376895 NUDT12Q9BQG2 462 aa9.16□□□□□ -0.94
SSX3-203ENST00000376895 TOP2AP11388 1531 aaKnown RBP9.15□□□□□ -0.94
SSX3-203ENST00000376895 HMGXB3Q12766 1538 aa9.15□□□□□ -0.94
SSX3-203ENST00000376895 GZF1Q9H116 711 aaPredicted RBP9.15□□□□□ -0.94
SSX3-203ENST00000376895 VRTNQ9H8Y1 702 aa9.15□□□□□ -0.94
SSX3-203ENST00000376895 GPSM3Q9Y4H4 160 aa9.15□□□□□ -0.94
SSX3-203ENST00000376895 USP17L3A6NCW0 530 aa9.14□□□□□ -0.95
SSX3-203ENST00000376895 USP17L4A6NCW7 530 aa9.14□□□□□ -0.95
SSX3-203ENST00000376895 PTK2Q05397 1052 aa9.14□□□□□ -0.95
SSX3-203ENST00000376895 CDCA8Q53HL2 280 aa9.14□□□□□ -0.95
SSX3-203ENST00000376895 USP17L2Q6R6M4 530 aa9.14□□□□□ -0.95
SSX3-203ENST00000376895 USP17L1Q7RTZ2 530 aa9.14□□□□□ -0.95
SSX3-203ENST00000376895 WBP1LQ9NX94 342 aa9.14□□□□□ -0.95
SSX3-203ENST00000376895 PIK3CDO00329 1044 aa9.13□□□□□ -0.95
SSX3-203ENST00000376895 SKIP12755 728 aa9.13□□□□□ -0.95
SSX3-203ENST00000376895 MMP16P51512 607 aa9.13□□□□□ -0.95
SSX3-203ENST00000376895 KCNH2Q12809 1159 aa9.13□□□□□ -0.95
SSX3-203ENST00000376895 PDXDC2PQ6P474 469 aa9.13□□□□□ -0.95
SSX3-203ENST00000376895 EVA1BQ9NVM1 165 aa9.13□□□□□ -0.95
SSX3-203ENST00000376895 TMEM88BA6NKF7 163 aa9.12□□□□□ -0.95
SSX3-203ENST00000376895 USP17L5A8MUK1 530 aa9.12□□□□□ -0.95
SSX3-203ENST00000376895 MCCD1P59942 119 aaPredicted RBP9.12□□□□□ -0.95
SSX3-203ENST00000376895 COPS2P61201 443 aa9.12□□□□□ -0.95
SSX3-203ENST00000376895 B4GALNT3Q6L9W6 998 aa9.12□□□□□ -0.95
SSX3-203ENST00000376895 PLEKHM2Q8IWE5 1019 aa9.12□□□□□ -0.95
SSX3-203ENST00000376895 PRDM9Q9NQV7 894 aa9.12□□□□□ -0.95
SSX3-203ENST00000376895 ELOAQ14241 798 aaKnown RBP9.11□□□□□ -0.95
SSX3-203ENST00000376895 SLFNL1Q499Z3 407 aa9.11□□□□□ -0.95
SSX3-203ENST00000376895 THSD4Q6ZMP0 1018 aa9.11□□□□□ -0.95
SSX3-203ENST00000376895 NYAP1Q6ZVC0 841 aa9.11□□□□□ -0.95
SSX3-203ENST00000376895 FAM160A2Q8N612 972 aaPredicted RBP9.11□□□□□ -0.95
SSX3-203ENST00000376895 CARNS1A5YM72 827 aa9.1□□□□□ -0.95
SSX3-203ENST00000376895 ADH1BP00325 375 aa9.1□□□□□ -0.95
SSX3-203ENST00000376895 MFAP1P55081 439 aaKnown RBP9.1□□□□□ -0.95
SSX3-203ENST00000376895 PCDHB9Q9Y5E1 797 aa9.1□□□□□ -0.95
SSX3-203ENST00000376895 TLL1O43897 1013 aa9.09□□□□□ -0.95
SSX3-203ENST00000376895 KANK4Q5T7N3 995 aaPredicted RBP9.09□□□□□ -0.95
SSX3-203ENST00000376895 LCE2DQ5TA82 110 aaPredicted RBP9.09□□□□□ -0.95
SSX3-203ENST00000376895 FAM174AQ8TBP5 190 aa9.09□□□□□ -0.95
SSX3-203ENST00000376895 CCDC88BA6NC98 1476 aa9.08□□□□□ -0.96
SSX3-203ENST00000376895 FAM196BA6NMK8 535 aa9.08□□□□□ -0.96
SSX3-203ENST00000376895 RNF135Q8IUD6 432 aa9.08□□□□□ -0.96
SSX3-203ENST00000376895 ARHGAP9Q9BRR9 750 aa9.08□□□□□ -0.96
SSX3-203ENST00000376895 NOVA2Q9UNW9 492 aaKnown RBP9.08□□□□□ -0.96
SSX3-203ENST00000376895 ZPR1O75312 459 aa9.07□□□□□ -0.96
SSX3-203ENST00000376895 CEP126Q9P2H0 1117 aa9.07□□□□□ -0.96
SSX3-203ENST00000376895 ZMIZ1Q9ULJ6 1067 aa9.07□□□□□ -0.96
SSX3-203ENST00000376895 USP17L15C9J2P7 530 aa9.06□□□□□ -0.96
SSX3-203ENST00000376895 USP17L10C9JJH3 530 aa9.06□□□□□ -0.96
SSX3-203ENST00000376895 USP17L13C9JLJ4 530 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms