RNA–Protein interactions for RNA: ENST00000376086.7

LST1-204, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-204ENST00000376086 ROBO1Q9Y6N7 1651 aa20.03■□□□□ 0.8
LST1-204ENST00000376086 NRXN3Q9Y4C0 1643 aa20.02■□□□□ 0.8
LST1-204ENST00000376086 NEXMIFQ5QGS0 1516 aa20■□□□□ 0.79
LST1-204ENST00000376086 PTPRUQ92729 1446 aa20■□□□□ 0.79
LST1-204ENST00000376086 TMEM92Q6UXU6 159 aa19.98■□□□□ 0.79
LST1-204ENST00000376086 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.98■□□□□ 0.79
LST1-204ENST00000376086 AMOTL2Q9Y2J4 779 aa19.98■□□□□ 0.79
LST1-204ENST00000376086 SETBP1Q9Y6X0 1596 aa19.97■□□□□ 0.79
LST1-204ENST00000376086 FAM135BQ49AJ0 1406 aa19.97■□□□□ 0.79
LST1-204ENST00000376086 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.96■□□□□ 0.79
LST1-204ENST00000376086 SLAIN2Q9P270 581 aa19.95■□□□□ 0.78
LST1-204ENST00000376086 METP08581 1390 aa19.95■□□□□ 0.78
LST1-204ENST00000376086 PIK3R4Q99570 1358 aa19.95■□□□□ 0.78
LST1-204ENST00000376086 PHLPP1O60346 1717 aa19.94■□□□□ 0.78
LST1-204ENST00000376086 XRN1Q8IZH2 1706 aaKnown RBP19.93■□□□□ 0.78
LST1-204ENST00000376086 SOCS7O14512 581 aa19.92■□□□□ 0.78
LST1-204ENST00000376086 SPRYD3Q8NCJ5 442 aa19.91■□□□□ 0.78
LST1-204ENST00000376086 PPLO60437 1756 aa19.9■□□□□ 0.78
LST1-204ENST00000376086 ATF3P18847 181 aa19.9■□□□□ 0.78
LST1-204ENST00000376086 MPHOSPH9Q99550 1183 aa19.89■□□□□ 0.77
LST1-204ENST00000376086 RGL3Q3MIN7 710 aa19.88■□□□□ 0.77
LST1-204ENST00000376086 C19orf44Q9H6X5 657 aa19.88■□□□□ 0.77
LST1-204ENST00000376086 NCOA3Q9Y6Q9 1424 aa19.87■□□□□ 0.77
LST1-204ENST00000376086 SETD1AO15047 1707 aaKnown RBP19.87■□□□□ 0.77
LST1-204ENST00000376086 PAXIP1Q6ZW49 1069 aaPredicted RBP19.86■□□□□ 0.77
LST1-204ENST00000376086 CADPS2Q86UW7 1296 aa19.86■□□□□ 0.77
LST1-204ENST00000376086 CCDC144AA2RUR9 1427 aa19.85■□□□□ 0.77
LST1-204ENST00000376086 NALCNQ8IZF0 1738 aa19.85■□□□□ 0.77
LST1-204ENST00000376086 SETD5Q9C0A6 1442 aa19.85■□□□□ 0.77
LST1-204ENST00000376086 KIF3CO14782 793 aa19.83■□□□□ 0.77
LST1-204ENST00000376086 CFAP44Q96MT7 982 aa19.83■□□□□ 0.77
LST1-204ENST00000376086 COL16A1Q07092 1604 aaPredicted RBP19.83■□□□□ 0.76
LST1-204ENST00000376086 RPGRIP1LQ68CZ1 1315 aa19.81■□□□□ 0.76
LST1-204ENST00000376086 RAB3GAP2Q9H2M9 1393 aa19.81■□□□□ 0.76
LST1-204ENST00000376086 IFT172Q9UG01 1749 aa19.79■□□□□ 0.76
LST1-204ENST00000376086 ADGRF5Q8IZF2 1346 aa19.79■□□□□ 0.76
LST1-204ENST00000376086 BRINP3Q76B58 766 aa19.79■□□□□ 0.76
LST1-204ENST00000376086 ADGRL3Q9HAR2 1447 aa19.78■□□□□ 0.76
LST1-204ENST00000376086 C2orf72A6NCS6 295 aa19.78■□□□□ 0.76
LST1-204ENST00000376086 RGS17Q9UGC6 210 aaPredicted RBP19.78■□□□□ 0.76
LST1-204ENST00000376086 ROBO2Q9HCK4 1378 aa19.78■□□□□ 0.76
LST1-204ENST00000376086 JCADQ9P266 1359 aa19.78■□□□□ 0.76
LST1-204ENST00000376086 DCCP43146 1447 aa19.77■□□□□ 0.76
LST1-204ENST00000376086 MST1RQ04912 1400 aa19.77■□□□□ 0.76
LST1-204ENST00000376086 AHDC1Q5TGY3 1603 aaPredicted RBP19.77■□□□□ 0.76
LST1-204ENST00000376086 SPATA31E1Q6ZUB1 1445 aa19.76■□□□□ 0.75
LST1-204ENST00000376086 ASXL1Q8IXJ9 1541 aa19.76■□□□□ 0.75
LST1-204ENST00000376086 DDX17Q92841 729 aaKnown RBP19.75■□□□□ 0.75
LST1-204ENST00000376086 STK26Q9P289 416 aa19.75■□□□□ 0.75
LST1-204ENST00000376086 PTCH1Q13635 1447 aa19.74■□□□□ 0.75
LST1-204ENST00000376086 TMC2Q8TDI7 906 aa19.72■□□□□ 0.75
LST1-204ENST00000376086 NUTM2BA6NNL0 878 aaPredicted RBP19.71■□□□□ 0.75
LST1-204ENST00000376086 NUTM2EB1AL46 878 aaPredicted RBP19.71■□□□□ 0.75
LST1-204ENST00000376086 TMEM132EQ6IEE7 984 aa19.71■□□□□ 0.75
LST1-204ENST00000376086 POTEAQ6S8J7 498 aa19.71■□□□□ 0.75
LST1-204ENST00000376086 NUTM2AQ8IVF1 878 aaPredicted RBP19.71■□□□□ 0.75
LST1-204ENST00000376086 LRP6O75581 1613 aa19.71■□□□□ 0.75
LST1-204ENST00000376086 NHSL1Q5SYE7 1610 aa19.71■□□□□ 0.75
LST1-204ENST00000376086 SHPRHQ149N8 1683 aa19.71■□□□□ 0.75
LST1-204ENST00000376086 ANKRD30BQ9BXX2 1392 aa19.7■□□□□ 0.74
LST1-204ENST00000376086 MEX3CQ5U5Q3 659 aaKnown RBP19.7■□□□□ 0.74
LST1-204ENST00000376086 CRISPLD2Q9H0B8 497 aa19.7■□□□□ 0.74
LST1-204ENST00000376086 SNPHO15079 494 aa19.69■□□□□ 0.74
LST1-204ENST00000376086 GPHNQ9NQX3 736 aaPredicted RBP19.69■□□□□ 0.74
LST1-204ENST00000376086 C1orf167Q5SNV9 1468 aa19.68■□□□□ 0.74
LST1-204ENST00000376086 HOXB3P14651 431 aaPredicted RBP19.68■□□□□ 0.74
LST1-204ENST00000376086 LCE2DQ5TA82 110 aaPredicted RBP19.67■□□□□ 0.74
LST1-204ENST00000376086 WAPLQ7Z5K2 1190 aa19.67■□□□□ 0.74
LST1-204ENST00000376086 ORAI2Q96SN7 254 aa19.67■□□□□ 0.74
LST1-204ENST00000376086 PIK3C2GO75747 1445 aa19.67■□□□□ 0.74
LST1-204ENST00000376086 NUTM2FA1L443 756 aa19.65■□□□□ 0.74
LST1-204ENST00000376086 FAM163AQ96GL9 167 aaPredicted RBP19.65■□□□□ 0.74
LST1-204ENST00000376086 SPATA31A6Q5VVP1 1343 aa19.65■□□□□ 0.74
LST1-204ENST00000376086 ACIN1Q9UKV3 1341 aaKnown RBP19.65■□□□□ 0.74
LST1-204ENST00000376086 PLEKHH1Q9ULM0 1364 aa19.64■□□□□ 0.73
LST1-204ENST00000376086 PRAG1Q86YV5 1406 aa19.64■□□□□ 0.73
LST1-204ENST00000376086 KNDC1Q76NI1 1749 aa19.64■□□□□ 0.73
LST1-204ENST00000376086 LRPPRCP42704 1394 aaKnown RBP19.63■□□□□ 0.73
LST1-204ENST00000376086 FOXK1P85037 733 aa19.62■□□□□ 0.73
LST1-204ENST00000376086 CFAP70Q5T0N1 1121 aa19.62■□□□□ 0.73
LST1-204ENST00000376086 YTHDC2Q9H6S0 1430 aaKnown RBP19.61■□□□□ 0.73
LST1-204ENST00000376086 KDM2AQ9Y2K7 1162 aa19.61■□□□□ 0.73
LST1-204ENST00000376086 CDC42BPGQ6DT37 1551 aa19.61■□□□□ 0.73
LST1-204ENST00000376086 PDE4AP27815 886 aa19.6■□□□□ 0.73
LST1-204ENST00000376086 LRRC59Q96AG4 307 aaKnown RBP19.6■□□□□ 0.73
LST1-204ENST00000376086 MYOM2P54296 1465 aa19.6■□□□□ 0.73
LST1-204ENST00000376086 ST18O60284 1047 aa19.59■□□□□ 0.73
LST1-204ENST00000376086 PLCB2Q00722 1185 aa19.59■□□□□ 0.73
LST1-204ENST00000376086 DSG2Q14126 1118 aa19.59■□□□□ 0.73
LST1-204ENST00000376086 SAFB2Q14151 953 aaKnown RBP eCLIP19.59■□□□□ 0.73
LST1-204ENST00000376086 ESCO1Q5FWF5 840 aa19.59■□□□□ 0.73
LST1-204ENST00000376086 TECPR2O15040 1411 aa19.59■□□□□ 0.73
LST1-204ENST00000376086 LAMC1P11047 1609 aa19.58■□□□□ 0.73
LST1-204ENST00000376086 PNPLA6Q8IY17 1366 aa19.58■□□□□ 0.73
LST1-204ENST00000376086 ABCC11Q96J66 1382 aa19.57■□□□□ 0.72
LST1-204ENST00000376086 NRXN1Q9ULB1 1477 aa19.57■□□□□ 0.72
LST1-204ENST00000376086 XPCQ01831 940 aaPredicted RBP19.57■□□□□ 0.72
LST1-204ENST00000376086 C14orf93Q9H972 538 aaKnown RBP19.57■□□□□ 0.72
LST1-204ENST00000376086 DOK7Q18PE1 504 aa19.56■□□□□ 0.72
LST1-204ENST00000376086 RGPD8O14715 1765 aaPredicted RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms