RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 WWC1Q8IX03 1113 aa25.43■■□□□ 1.66
TGFBR1-202ENST00000374994 SAFBQ15424 915 aaKnown RBP eCLIP25.42■■□□□ 1.66
TGFBR1-202ENST00000374994 ERC1Q8IUD2 1116 aa25.42■■□□□ 1.66
TGFBR1-202ENST00000374994 SURF6O75683 361 aaKnown RBP25.41■■□□□ 1.66
TGFBR1-202ENST00000374994 CEP89Q96ST8 783 aa25.41■■□□□ 1.66
TGFBR1-202ENST00000374994 SLC12A5Q9H2X9 1139 aa25.41■■□□□ 1.66
TGFBR1-202ENST00000374994 MARCH6O60337 910 aa25.41■■□□□ 1.66
TGFBR1-202ENST00000374994 SDF4Q9BRK5 362 aa25.41■■□□□ 1.66
TGFBR1-202ENST00000374994 SRCIN1Q9C0H9 1055 aa25.41■■□□□ 1.66
TGFBR1-202ENST00000374994 CCDC9Q9Y3X0 531 aaKnown RBP25.4■■□□□ 1.66
TGFBR1-202ENST00000374994 TOPBP1Q92547 1522 aa25.4■■□□□ 1.66
TGFBR1-202ENST00000374994 RPGRIP1LQ68CZ1 1315 aa25.4■■□□□ 1.66
TGFBR1-202ENST00000374994 POLA1P09884 1462 aaPredicted RBP25.4■■□□□ 1.66
TGFBR1-202ENST00000374994 EPRSP07814 1512 aaKnown RBP25.4■■□□□ 1.66
TGFBR1-202ENST00000374994 RPAP2Q8IXW5 612 aaPredicted RBP25.39■■□□□ 1.66
TGFBR1-202ENST00000374994 C11orf95C9JLR9 678 aaPredicted RBP25.39■■□□□ 1.66
TGFBR1-202ENST00000374994 CCDC192P0DO97 292 aa25.39■■□□□ 1.66
TGFBR1-202ENST00000374994 RALYLQ86SE5 291 aaKnown RBP25.39■■□□□ 1.65
TGFBR1-202ENST00000374994 CCDC66A2RUB6 948 aa25.39■■□□□ 1.65
TGFBR1-202ENST00000374994 OLFM4Q6UX06 510 aa25.38■■□□□ 1.65
TGFBR1-202ENST00000374994 KINO60870 393 aaKnown RBP25.38■■□□□ 1.65
TGFBR1-202ENST00000374994 ZSCAN30Q86W11 494 aa25.38■■□□□ 1.65
TGFBR1-202ENST00000374994 TMX4Q9H1E5 349 aaPredicted RBP25.38■■□□□ 1.65
TGFBR1-202ENST00000374994 AFAP1Q8N556 730 aa25.37■■□□□ 1.65
TGFBR1-202ENST00000374994 FSD1Q9BTV5 496 aa25.37■■□□□ 1.65
TGFBR1-202ENST00000374994 NKTRP30414 1462 aaKnown RBP25.37■■□□□ 1.65
TGFBR1-202ENST00000374994 HSP90B2PQ58FF3 399 aa25.37■■□□□ 1.65
TGFBR1-202ENST00000374994 C1orf115Q9H7X2 142 aa25.37■■□□□ 1.65
TGFBR1-202ENST00000374994 ANKRD1Q15327 319 aa25.36■■□□□ 1.65
TGFBR1-202ENST00000374994 FCHSD2O94868 740 aa25.36■■□□□ 1.65
TGFBR1-202ENST00000374994 NOM1Q5C9Z4 860 aaKnown RBP25.36■■□□□ 1.65
TGFBR1-202ENST00000374994 PCF11O94913 1555 aaKnown RBP25.36■■□□□ 1.65
TGFBR1-202ENST00000374994 LRRCC1Q9C099 1032 aa25.36■■□□□ 1.65
TGFBR1-202ENST00000374994 APPP05067 770 aa25.35■■□□□ 1.65
TGFBR1-202ENST00000374994 ZNF396Q96N95 335 aaPredicted RBP25.35■■□□□ 1.65
TGFBR1-202ENST00000374994 FIBPO43427 364 aa25.34■■□□□ 1.65
TGFBR1-202ENST00000374994 LRPPRCP42704 1394 aaKnown RBP25.34■■□□□ 1.65
TGFBR1-202ENST00000374994 NFXL1Q6ZNB6 911 aa25.34■■□□□ 1.65
TGFBR1-202ENST00000374994 ATAD2Q6PL18 1390 aa25.34■■□□□ 1.65
TGFBR1-202ENST00000374994 ERICH2A1L162 156 aa25.34■■□□□ 1.65
TGFBR1-202ENST00000374994 RPRD2Q5VT52 1461 aaKnown RBP25.33■■□□□ 1.65
TGFBR1-202ENST00000374994 ABCC11Q96J66 1382 aa25.33■■□□□ 1.65
TGFBR1-202ENST00000374994 GTF2E1P29083 439 aaPredicted RBP25.33■■□□□ 1.65
TGFBR1-202ENST00000374994 TRHP20396 242 aaPredicted RBP25.33■■□□□ 1.65
TGFBR1-202ENST00000374994 CYP46A1Q9Y6A2 500 aa25.33■■□□□ 1.65
TGFBR1-202ENST00000374994 CCDC141Q6ZP82 1450 aa25.32■■□□□ 1.64
TGFBR1-202ENST00000374994 RIC3Q7Z5B4 369 aa25.32■■□□□ 1.64
TGFBR1-202ENST00000374994 CCDC27Q2M243 656 aa25.32■■□□□ 1.64
TGFBR1-202ENST00000374994 ERCC4Q92889 916 aaPredicted RBP25.32■■□□□ 1.64
TGFBR1-202ENST00000374994 IFT140Q96RY7 1462 aa25.32■■□□□ 1.64
TGFBR1-202ENST00000374994 ZSCAN31Q96LW9 406 aaPredicted RBP25.31■■□□□ 1.64
TGFBR1-202ENST00000374994 DHX16O60231 1041 aaKnown RBP25.31■■□□□ 1.64
TGFBR1-202ENST00000374994 CWC15Q9P013 229 aaKnown RBP25.31■■□□□ 1.64
TGFBR1-202ENST00000374994 KRT85P78386 507 aa25.31■■□□□ 1.64
TGFBR1-202ENST00000374994 RARSP54136 660 aaKnown RBP25.31■■□□□ 1.64
TGFBR1-202ENST00000374994 AMOTL1Q8IY63 956 aa25.31■■□□□ 1.64
TGFBR1-202ENST00000374994 SLC4A2P04920 1241 aa25.3■■□□□ 1.64
TGFBR1-202ENST00000374994 ZNF692Q9BU19 519 aaPredicted RBP25.3■■□□□ 1.64
TGFBR1-202ENST00000374994 PCMTD1Q96MG8 357 aaPredicted RBP25.3■■□□□ 1.64
TGFBR1-202ENST00000374994 ABCA10Q8WWZ4 1543 aa25.3■■□□□ 1.64
TGFBR1-202ENST00000374994 AK7Q96M32 723 aa25.3■■□□□ 1.64
TGFBR1-202ENST00000374994 ALDH1L2Q3SY69 923 aa25.3■■□□□ 1.64
TGFBR1-202ENST00000374994 DNMBPQ6XZF7 1577 aa25.3■■□□□ 1.64
TGFBR1-202ENST00000374994 PTPN23Q9H3S7 1636 aa25.3■■□□□ 1.64
TGFBR1-202ENST00000374994 DHX29Q7Z478 1369 aaKnown RBP25.28■■□□□ 1.64
TGFBR1-202ENST00000374994 ABCC5O15440 1437 aa25.28■■□□□ 1.64
TGFBR1-202ENST00000374994 SLC52A1Q9NWF4 448 aa25.28■■□□□ 1.64
TGFBR1-202ENST00000374994 PRAM1Q96QH2 718 aa25.27■■□□□ 1.64
TGFBR1-202ENST00000374994 GPRASP1Q5JY77 1395 aa25.27■■□□□ 1.64
TGFBR1-202ENST00000374994 CDR1P51861 262 aa25.27■■□□□ 1.64
TGFBR1-202ENST00000374994 PSME1Q06323 249 aa25.27■■□□□ 1.64
TGFBR1-202ENST00000374994 RAPGEF4Q8WZA2 1011 aa25.27■■□□□ 1.64
TGFBR1-202ENST00000374994 TMPOP42166 694 aaKnown RBP25.26■■□□□ 1.63
TGFBR1-202ENST00000374994 C20orf194Q5TEA3 1177 aa25.26■■□□□ 1.63
TGFBR1-202ENST00000374994 CCDC112Q8NEF3 446 aa25.26■■□□□ 1.63
TGFBR1-202ENST00000374994 NEUROD6Q96NK8 337 aa25.26■■□□□ 1.63
TGFBR1-202ENST00000374994 TMEM57Q8N5G2 664 aa25.25■■□□□ 1.63
TGFBR1-202ENST00000374994 KIAA0586Q9BVV6 1533 aa25.25■■□□□ 1.63
TGFBR1-202ENST00000374994 UQCRHLA0A096LP55 91 aa25.25■■□□□ 1.63
TGFBR1-202ENST00000374994 UQCRHP07919 91 aa25.25■■□□□ 1.63
TGFBR1-202ENST00000374994 XBP1P17861 261 aa25.25■■□□□ 1.63
TGFBR1-202ENST00000374994 RUFY1Q96T51 708 aa25.25■■□□□ 1.63
TGFBR1-202ENST00000374994 PKNOX2Q96KN3 472 aa25.25■■□□□ 1.63
TGFBR1-202ENST00000374994 NSD3Q9BZ95 1437 aa25.25■■□□□ 1.63
TGFBR1-202ENST00000374994 JMYQ8N9B5 988 aa25.24■■□□□ 1.63
TGFBR1-202ENST00000374994 TNMDQ9H2S6 317 aa25.24■■□□□ 1.63
TGFBR1-202ENST00000374994 RBM10P98175 930 aaKnown RBP25.24■■□□□ 1.63
TGFBR1-202ENST00000374994 NFE2L2Q16236 605 aa25.24■■□□□ 1.63
TGFBR1-202ENST00000374994 WASHC4Q2M389 1173 aa25.24■■□□□ 1.63
TGFBR1-202ENST00000374994 NLRP6P59044 892 aa25.24■■□□□ 1.63
TGFBR1-202ENST00000374994 DUSP27Q5VZP5 1158 aa25.24■■□□□ 1.63
TGFBR1-202ENST00000374994 FBXW7Q969H0 707 aa25.23■■□□□ 1.63
TGFBR1-202ENST00000374994 BRMS1Q9HCU9 246 aa25.23■■□□□ 1.63
TGFBR1-202ENST00000374994 NOL10Q9BSC4 688 aaKnown RBP25.23■■□□□ 1.63
TGFBR1-202ENST00000374994 TBC1D2Q9BYX2 928 aa25.22■■□□□ 1.63
TGFBR1-202ENST00000374994 SMC2O95347 1197 aa25.22■■□□□ 1.63
TGFBR1-202ENST00000374994 PPP6R1Q9UPN7 881 aa25.22■■□□□ 1.63
TGFBR1-202ENST00000374994 PIP4K2AP48426 406 aaPredicted RBP25.21■■□□□ 1.63
TGFBR1-202ENST00000374994 MRC2Q9UBG0 1479 aa25.21■■□□□ 1.63
TGFBR1-202ENST00000374994 STK38Q15208 465 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms