RNA–Protein interactions for RNA: ENST00000373891.2

CHPF-202, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 1,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-202ENST00000373891 CRYBG1Q9Y4K1 1723 aa29.76■■■□□ 2.35
CHPF-202ENST00000373891 ARHGEF28Q8N1W1 1705 aaKnown RBP29.74■■■□□ 2.35
CHPF-202ENST00000373891 PAK3O75914 559 aaPredicted RBP29.74■■■□□ 2.35
CHPF-202ENST00000373891 WASLO00401 505 aaPredicted RBP29.73■■■□□ 2.35
CHPF-202ENST00000373891 EIF3AQ14152 1382 aaKnown RBP29.73■■■□□ 2.35
CHPF-202ENST00000373891 NGDNQ8NEJ9 315 aaKnown RBP29.72■■■□□ 2.35
CHPF-202ENST00000373891 ITSN1Q15811 1721 aa29.71■■■□□ 2.35
CHPF-202ENST00000373891 FAM182BQ5T319 152 aa29.71■■■□□ 2.35
CHPF-202ENST00000373891 PSDA5PKW4 1024 aaPredicted RBP29.67■■■□□ 2.34
CHPF-202ENST00000373891 RGPD1P0DJD0 1748 aa29.66■■■□□ 2.34
CHPF-202ENST00000373891 BAG6P46379 1132 aa29.66■■■□□ 2.34
CHPF-202ENST00000373891 PRDM11Q9NQV5 511 aa29.65■■■□□ 2.34
CHPF-202ENST00000373891 ATP7BP35670 1465 aa29.64■■■□□ 2.34
CHPF-202ENST00000373891 SPATA31A5Q5VU36 1347 aa29.64■■■□□ 2.34
CHPF-202ENST00000373891 SPATA31A7Q8IWB4 1347 aa29.64■■■□□ 2.34
CHPF-202ENST00000373891 PHRF1Q9P1Y6 1649 aaKnown RBP29.63■■■□□ 2.33
CHPF-202ENST00000373891 LRP5O75197 1615 aa29.62■■■□□ 2.33
CHPF-202ENST00000373891 THSD7AQ9UPZ6 1657 aa29.62■■■□□ 2.33
CHPF-202ENST00000373891 CHRNA2Q15822 529 aa29.61■■■□□ 2.33
CHPF-202ENST00000373891 NUTM2GQ5VZR2 741 aa29.61■■■□□ 2.33
CHPF-202ENST00000373891 NUDT16Q96DE0 195 aaKnown RBP29.61■■■□□ 2.33
CHPF-202ENST00000373891 EN1Q05925 392 aaPredicted RBP29.6■■■□□ 2.33
CHPF-202ENST00000373891 TNS1Q9HBL0 1735 aaKnown RBP29.59■■■□□ 2.33
CHPF-202ENST00000373891 KIAA0232Q92628 1395 aa29.59■■■□□ 2.33
CHPF-202ENST00000373891 STRN4Q9NRL3 753 aa29.58■■■□□ 2.33
CHPF-202ENST00000373891 TOPAZ1Q8N9V7 1692 aa29.56■■■□□ 2.32
CHPF-202ENST00000373891 ZC3H6P61129 1189 aaKnown RBP29.56■■■□□ 2.32
CHPF-202ENST00000373891 CDK19Q9BWU1 502 aa29.55■■■□□ 2.32
CHPF-202ENST00000373891 STAC3Q96MF2 364 aa29.53■■■□□ 2.32
CHPF-202ENST00000373891 SPATA31A1Q5TZJ5 1347 aa29.52■■■□□ 2.32
CHPF-202ENST00000373891 HRCP23327 699 aa29.52■■■□□ 2.32
CHPF-202ENST00000373891 USP35Q9P2H5 1018 aa29.52■■■□□ 2.32
CHPF-202ENST00000373891 ACEP12821 1306 aa29.5■■■□□ 2.31
CHPF-202ENST00000373891 R3HDM1Q15032 1099 aaKnown RBP29.48■■■□□ 2.31
CHPF-202ENST00000373891 KIAA1210Q9ULL0 1709 aa29.48■■■□□ 2.31
CHPF-202ENST00000373891 NRKQ7Z2Y5 1582 aa29.47■■■□□ 2.31
CHPF-202ENST00000373891 TRIM37O94972 964 aa29.47■■■□□ 2.31
CHPF-202ENST00000373891 EZH2Q15910 746 aaKnown RBP29.47■■■□□ 2.31
CHPF-202ENST00000373891 NBPF8Q3BBV2 869 aa29.46■■■□□ 2.31
CHPF-202ENST00000373891 POLR3AO14802 1390 aaPredicted RBP29.46■■■□□ 2.31
CHPF-202ENST00000373891 EVA1CP58658 441 aa29.44■■■□□ 2.3
CHPF-202ENST00000373891 CCDC61Q9Y6R9 512 aa29.44■■■□□ 2.3
CHPF-202ENST00000373891 DISP2A7MBM2 1401 aa29.44■■■□□ 2.3
CHPF-202ENST00000373891 NBPF1Q3BBV0 1214 aa29.43■■■□□ 2.3
CHPF-202ENST00000373891 ABTB2Q8N961 1025 aa29.43■■■□□ 2.3
CHPF-202ENST00000373891 SSH2Q76I76 1423 aa29.43■■■□□ 2.3
CHPF-202ENST00000373891 CAMTA1Q9Y6Y1 1673 aa29.42■■■□□ 2.3
CHPF-202ENST00000373891 LARP1Q6PKG0 1096 aaKnown RBP29.4■■■□□ 2.3
CHPF-202ENST00000373891 FAM196AQ6ZSG2 479 aa29.4■■■□□ 2.3
CHPF-202ENST00000373891 LMO7Q8WWI1 1683 aa29.4■■■□□ 2.3
CHPF-202ENST00000373891 PLEKHG3A1L390 1219 aa29.39■■■□□ 2.3
CHPF-202ENST00000373891 APBA3O96018 575 aa29.38■■■□□ 2.29
CHPF-202ENST00000373891 SRPK2P78362 688 aaKnown RBP29.38■■■□□ 2.29
CHPF-202ENST00000373891 PPIP5K1Q6PFW1 1433 aa29.37■■■□□ 2.29
CHPF-202ENST00000373891 CAMKK2Q96RR4 588 aa29.37■■■□□ 2.29
CHPF-202ENST00000373891 QRICH2Q9H0J4 1663 aa29.37■■■□□ 2.29
CHPF-202ENST00000373891 PDE3BQ13370 1112 aa29.36■■■□□ 2.29
CHPF-202ENST00000373891 CABP2Q9NPB3 220 aa29.36■■■□□ 2.29
CHPF-202ENST00000373891 ZBTB7CA1YPR0 619 aa29.35■■■□□ 2.29
CHPF-202ENST00000373891 RREB1Q92766 1687 aa29.34■■■□□ 2.29
CHPF-202ENST00000373891 BARGINQ6ZT62 677 aa29.34■■■□□ 2.29
CHPF-202ENST00000373891 USP19O94966 1318 aa29.34■■■□□ 2.29
CHPF-202ENST00000373891 NUP188Q5SRE5 1749 aa29.34■■■□□ 2.29
CHPF-202ENST00000373891 CENPJQ9HC77 1338 aaPredicted RBP29.32■■■□□ 2.28
CHPF-202ENST00000373891 TCP11L2Q8N4U5 519 aa29.32■■■□□ 2.28
CHPF-202ENST00000373891 CPDO75976 1380 aa29.31■■■□□ 2.28
CHPF-202ENST00000373891 NLRP13Q86W25 1043 aa29.31■■■□□ 2.28
CHPF-202ENST00000373891 GCP02774 474 aa29.3■■■□□ 2.28
CHPF-202ENST00000373891 PARP4Q9UKK3 1724 aaKnown RBP29.28■■■□□ 2.28
CHPF-202ENST00000373891 COL5A2P05997 1499 aaPredicted RBP29.28■■■□□ 2.28
CHPF-202ENST00000373891 PARD3Q8TEW0 1356 aa29.25■■■□□ 2.27
CHPF-202ENST00000373891 CABP1Q9NZU7 370 aa29.24■■■□□ 2.27
CHPF-202ENST00000373891 NLRP6P59044 892 aa29.23■■■□□ 2.27
CHPF-202ENST00000373891 SBF2Q86WG5 1849 aa29.22■■■□□ 2.27
CHPF-202ENST00000373891 USP6P35125 1406 aa29.22■■■□□ 2.27
CHPF-202ENST00000373891 THRAP3Q9Y2W1 955 aaKnown RBP29.22■■■□□ 2.27
CHPF-202ENST00000373891 PIK3C2AO00443 1686 aa29.21■■■□□ 2.27
CHPF-202ENST00000373891 RGPD5Q99666 1765 aa29.21■■■□□ 2.27
CHPF-202ENST00000373891 CRB1P82279 1406 aa29.2■■■□□ 2.27
CHPF-202ENST00000373891 LRRC37A3O60309 1634 aa29.2■■■□□ 2.27
CHPF-202ENST00000373891 WNK3Q9BYP7 1800 aa29.19■■■□□ 2.26
CHPF-202ENST00000373891 SLIT3O75094 1523 aa29.19■■■□□ 2.26
CHPF-202ENST00000373891 PEAK1Q9H792 1746 aa29.18■■■□□ 2.26
CHPF-202ENST00000373891 COL18A1P39060 1754 aa29.18■■■□□ 2.26
CHPF-202ENST00000373891 NBPF14Q5TI25 921 aa29.17■■■□□ 2.26
CHPF-202ENST00000373891 BRD4O60885 1362 aaPredicted RBP29.15■■■□□ 2.26
CHPF-202ENST00000373891 TOM1L2Q6ZVM7 507 aa29.15■■■□□ 2.26
CHPF-202ENST00000373891 TRPM1Q7Z4N2 1603 aa29.15■■■□□ 2.26
CHPF-202ENST00000373891 AATKQ6ZMQ8 1374 aa29.14■■■□□ 2.26
CHPF-202ENST00000373891 OVOS2A0A0G2JMS6 1433 aa29.14■■■□□ 2.26
CHPF-202ENST00000373891 OVOS2A0A0J9YW53 1432 aa29.14■■■□□ 2.26
CHPF-202ENST00000373891 OVOS2Q6IE36 1432 aa29.14■■■□□ 2.26
CHPF-202ENST00000373891 L3MBTL2Q969R5 705 aa29.14■■■□□ 2.26
CHPF-202ENST00000373891 AKAP12Q02952 1782 aa29.13■■■□□ 2.25
CHPF-202ENST00000373891 SOX12O15370 315 aa29.13■■■□□ 2.25
CHPF-202ENST00000373891 DDB1Q16531 1140 aa29.11■■■□□ 2.25
CHPF-202ENST00000373891 AXIN2Q9Y2T1 843 aa29.11■■■□□ 2.25
CHPF-202ENST00000373891 EVC2Q86UK5 1308 aa29.11■■■□□ 2.25
CHPF-202ENST00000373891 PTF1AQ7RTS3 328 aa29.09■■■□□ 2.25
CHPF-202ENST00000373891 SIN3AQ96ST3 1273 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms