RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 ADAMTSL3P82987 1691 aa25.74■■□□□ 1.71
HDAC1-201ENST00000373548 TOPAZ1Q8N9V7 1692 aa25.74■■□□□ 1.71
HDAC1-201ENST00000373548 U2AF1L5P0DN76 240 aaPredicted RBP25.74■■□□□ 1.71
HDAC1-201ENST00000373548 U2AF1Q01081 240 aaKnown RBP eCLIP25.74■■□□□ 1.71
HDAC1-201ENST00000373548 WWC1Q8IX03 1113 aa25.74■■□□□ 1.71
HDAC1-201ENST00000373548 TCP11L2Q8N4U5 519 aa25.74■■□□□ 1.71
HDAC1-201ENST00000373548 AMOTL2Q9Y2J4 779 aa25.74■■□□□ 1.71
HDAC1-201ENST00000373548 E9PSI1 815 aa25.73■■□□□ 1.71
HDAC1-201ENST00000373548 PNPLA6Q8IY17 1366 aa25.72■■□□□ 1.71
HDAC1-201ENST00000373548 PTCH1Q13635 1447 aa25.72■■□□□ 1.71
HDAC1-201ENST00000373548 RRP7AQ9Y3A4 280 aaKnown RBP25.71■■□□□ 1.71
HDAC1-201ENST00000373548 MAP2P11137 1827 aaKnown RBP25.71■■□□□ 1.71
HDAC1-201ENST00000373548 PLIN1O60240 522 aa25.7■■□□□ 1.71
HDAC1-201ENST00000373548 NKTRP30414 1462 aaKnown RBP25.7■■□□□ 1.71
HDAC1-201ENST00000373548 XRN1Q8IZH2 1706 aaKnown RBP25.7■■□□□ 1.71
HDAC1-201ENST00000373548 EXOC6Q8TAG9 804 aa25.7■■□□□ 1.71
HDAC1-201ENST00000373548 PHF23Q9BUL5 403 aaPredicted RBP25.7■■□□□ 1.71
HDAC1-201ENST00000373548 NME9Q86XW9 330 aa25.7■■□□□ 1.7
HDAC1-201ENST00000373548 CCDC136Q96JN2 1154 aa25.7■■□□□ 1.7
HDAC1-201ENST00000373548 NEUROD2Q15784 382 aa25.69■■□□□ 1.7
HDAC1-201ENST00000373548 ZNF142P52746 1687 aaPredicted RBP25.69■■□□□ 1.7
HDAC1-201ENST00000373548 U2SURPO15042 1029 aaKnown RBP25.67■■□□□ 1.7
HDAC1-201ENST00000373548 ZNF692Q9BU19 519 aaPredicted RBP25.67■■□□□ 1.7
HDAC1-201ENST00000373548 POLKQ9UBT6 870 aa25.67■■□□□ 1.7
HDAC1-201ENST00000373548 FBLN1P23142 703 aa25.66■■□□□ 1.7
HDAC1-201ENST00000373548 CCDC27Q2M243 656 aa25.66■■□□□ 1.7
HDAC1-201ENST00000373548 ZRANB1Q9UGI0 708 aa25.66■■□□□ 1.7
HDAC1-201ENST00000373548 NRKQ7Z2Y5 1582 aa25.66■■□□□ 1.7
HDAC1-201ENST00000373548 DIAPH1O60610 1272 aaKnown RBP25.65■■□□□ 1.7
HDAC1-201ENST00000373548 NCBP3Q53F19 620 aaKnown RBP25.65■■□□□ 1.7
HDAC1-201ENST00000373548 PLEKHF1Q96S99 279 aa25.64■■□□□ 1.7
HDAC1-201ENST00000373548 PLEKHG3A1L390 1219 aa25.63■■□□□ 1.69
HDAC1-201ENST00000373548 NUTM2FA1L443 756 aa25.63■■□□□ 1.69
HDAC1-201ENST00000373548 WDR63Q8IWG1 891 aa25.62■■□□□ 1.69
HDAC1-201ENST00000373548 AATKQ6ZMQ8 1374 aa25.62■■□□□ 1.69
HDAC1-201ENST00000373548 SETD1BQ9UPS6 1966 aaKnown RBP25.61■■□□□ 1.69
HDAC1-201ENST00000373548 ACEP12821 1306 aa25.61■■□□□ 1.69
HDAC1-201ENST00000373548 PIK3R4Q99570 1358 aa25.61■■□□□ 1.69
HDAC1-201ENST00000373548 COG3Q96JB2 828 aa25.6■■□□□ 1.69
HDAC1-201ENST00000373548 PPM1GO15355 546 aaPredicted RBP25.59■■□□□ 1.69
HDAC1-201ENST00000373548 CRBNQ96SW2 442 aa25.59■■□□□ 1.69
HDAC1-201ENST00000373548 CDK12Q9NYV4 1490 aaPredicted RBP25.58■■□□□ 1.69
HDAC1-201ENST00000373548 C20orf194Q5TEA3 1177 aa25.58■■□□□ 1.69
HDAC1-201ENST00000373548 EMILIN1Q9Y6C2 1016 aa25.58■■□□□ 1.69
HDAC1-201ENST00000373548 RGPD8O14715 1765 aaPredicted RBP25.58■■□□□ 1.69
HDAC1-201ENST00000373548 USP6P35125 1406 aa25.58■■□□□ 1.69
HDAC1-201ENST00000373548 TTC21BQ7Z4L5 1316 aa25.58■■□□□ 1.69
HDAC1-201ENST00000373548 KCNA6P17658 529 aa25.57■■□□□ 1.68
HDAC1-201ENST00000373548 ANKLE2Q86XL3 938 aa25.57■■□□□ 1.68
HDAC1-201ENST00000373548 LRRC7Q96NW7 1537 aa25.56■■□□□ 1.68
HDAC1-201ENST00000373548 MAPK8IP3Q9UPT6 1336 aa25.55■■□□□ 1.68
HDAC1-201ENST00000373548 CHD2O14647 1828 aaKnown RBP25.55■■□□□ 1.68
HDAC1-201ENST00000373548 TMPOP42166 694 aaKnown RBP25.55■■□□□ 1.68
HDAC1-201ENST00000373548 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.55■■□□□ 1.68
HDAC1-201ENST00000373548 SSH2Q76I76 1423 aa25.53■■□□□ 1.68
HDAC1-201ENST00000373548 FCHSD2O94868 740 aa25.52■■□□□ 1.68
HDAC1-201ENST00000373548 PNNQ9H307 717 aaKnown RBP25.52■■□□□ 1.68
HDAC1-201ENST00000373548 OVOS2A0A0J9YW53 1432 aa25.52■■□□□ 1.68
HDAC1-201ENST00000373548 OVOS2Q6IE36 1432 aa25.52■■□□□ 1.68
HDAC1-201ENST00000373548 BCAR3O75815 825 aa25.52■■□□□ 1.68
HDAC1-201ENST00000373548 NALCNQ8IZF0 1738 aa25.51■■□□□ 1.67
HDAC1-201ENST00000373548 RBM19Q9Y4C8 960 aaKnown RBP25.51■■□□□ 1.67
HDAC1-201ENST00000373548 RRS1Q15050 365 aaKnown RBP25.51■■□□□ 1.67
HDAC1-201ENST00000373548 RSPH6AQ9H0K4 717 aa25.51■■□□□ 1.67
HDAC1-201ENST00000373548 TRIM35Q9UPQ4 493 aa25.51■■□□□ 1.67
HDAC1-201ENST00000373548 FMN2Q9NZ56 1722 aa25.5■■□□□ 1.67
HDAC1-201ENST00000373548 IL13P35225 146 aa25.5■■□□□ 1.67
HDAC1-201ENST00000373548 PMFBP1Q8TBY8 1022 aa25.49■■□□□ 1.67
HDAC1-201ENST00000373548 ANKARQ7Z5J8 1434 aa25.48■■□□□ 1.67
HDAC1-201ENST00000373548 MYH16Q9H6N6 1097 aa25.48■■□□□ 1.67
HDAC1-201ENST00000373548 PRKAR2BP31323 418 aa25.47■■□□□ 1.67
HDAC1-201ENST00000373548 RIPK4P57078 832 aa25.45■■□□□ 1.66
HDAC1-201ENST00000373548 TTC21AQ8NDW8 1320 aa25.44■■□□□ 1.66
HDAC1-201ENST00000373548 HMOX1P09601 288 aa25.44■■□□□ 1.66
HDAC1-201ENST00000373548 USP31Q70CQ4 1352 aa25.44■■□□□ 1.66
HDAC1-201ENST00000373548 NGDNQ8NEJ9 315 aaKnown RBP25.43■■□□□ 1.66
HDAC1-201ENST00000373548 RARSP54136 660 aaKnown RBP25.43■■□□□ 1.66
HDAC1-201ENST00000373548 IL16Q14005 1332 aa25.42■■□□□ 1.66
HDAC1-201ENST00000373548 PEAK1Q9H792 1746 aa25.41■■□□□ 1.66
HDAC1-201ENST00000373548 FANCIQ9NVI1 1328 aa25.41■■□□□ 1.66
HDAC1-201ENST00000373548 NPHP4O75161 1426 aaPredicted RBP25.41■■□□□ 1.66
HDAC1-201ENST00000373548 PHACTR3Q96KR7 559 aa25.4■■□□□ 1.66
HDAC1-201ENST00000373548 PIK3C2AO00443 1686 aa25.4■■□□□ 1.66
HDAC1-201ENST00000373548 NEFMP07197 916 aa25.4■■□□□ 1.66
HDAC1-201ENST00000373548 TSR2Q969E8 191 aaKnown RBP25.39■■□□□ 1.66
HDAC1-201ENST00000373548 NFE2L2Q16236 605 aa25.37■■□□□ 1.65
HDAC1-201ENST00000373548 PDE3AQ14432 1141 aa25.37■■□□□ 1.65
HDAC1-201ENST00000373548 EIF4A2Q14240 407 aaKnown RBP25.35■■□□□ 1.65
HDAC1-201ENST00000373548 DLG5Q8TDM6 1919 aa25.35■■□□□ 1.65
HDAC1-201ENST00000373548 CT47B1P0C2W7 299 aaPredicted RBP25.34■■□□□ 1.65
HDAC1-201ENST00000373548 RBM33Q96EV2 1170 aaKnown RBP25.34■■□□□ 1.65
HDAC1-201ENST00000373548 ADGRL3Q9HAR2 1447 aa25.33■■□□□ 1.65
HDAC1-201ENST00000373548 CANXP27824 592 aaKnown RBP25.33■■□□□ 1.65
HDAC1-201ENST00000373548 EXOSC9Q06265 439 aaKnown RBP25.33■■□□□ 1.65
HDAC1-201ENST00000373548 MARF1Q9Y4F3 1742 aaKnown RBP25.33■■□□□ 1.65
HDAC1-201ENST00000373548 RGPD1P0DJD0 1748 aa25.32■■□□□ 1.64
HDAC1-201ENST00000373548 SOX12O15370 315 aa25.32■■□□□ 1.64
HDAC1-201ENST00000373548 FRAT1Q92837 279 aaPredicted RBP25.32■■□□□ 1.64
HDAC1-201ENST00000373548 BCL2L13Q9BXK5 485 aa25.32■■□□□ 1.64
HDAC1-201ENST00000373548 USP54Q70EL1 1684 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms