RNA–Protein interactions for RNA: ENST00000373463.7

TMEM54-202, Transcript of transmembrane protein 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM54, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-202ENST00000373463 USP47Q96K76 1375 aa30.09■■■□□ 2.41
TMEM54-202ENST00000373463 PAK3O75914 559 aaPredicted RBP30.08■■■□□ 2.41
TMEM54-202ENST00000373463 FNBP4Q8N3X1 1017 aaPredicted RBP30.08■■■□□ 2.41
TMEM54-202ENST00000373463 AKAP12Q02952 1782 aa30.08■■■□□ 2.41
TMEM54-202ENST00000373463 ATAD2Q6PL18 1390 aa30.06■■■□□ 2.4
TMEM54-202ENST00000373463 USP6P35125 1406 aa30.05■■■□□ 2.4
TMEM54-202ENST00000373463 SSH2Q76I76 1423 aa30.05■■■□□ 2.4
TMEM54-202ENST00000373463 SOCS7O14512 581 aa30.05■■■□□ 2.4
TMEM54-202ENST00000373463 BCL9LQ86UU0 1499 aa30.05■■■□□ 2.4
TMEM54-202ENST00000373463 PHRF1Q9P1Y6 1649 aaKnown RBP30.04■■■□□ 2.4
TMEM54-202ENST00000373463 SLIT2O94813 1529 aa30.03■■■□□ 2.4
TMEM54-202ENST00000373463 CPSF1Q10570 1443 aaKnown RBP30.02■■■□□ 2.4
TMEM54-202ENST00000373463 PLCH1Q4KWH8 1693 aa30.01■■■□□ 2.4
TMEM54-202ENST00000373463 CD163L1Q9NR16 1453 aa30.01■■■□□ 2.4
TMEM54-202ENST00000373463 USP21Q9UK80 565 aa30.01■■■□□ 2.39
TMEM54-202ENST00000373463 NRKQ7Z2Y5 1582 aa30.01■■■□□ 2.39
TMEM54-202ENST00000373463 TNKS1BP1Q9C0C2 1729 aaKnown RBP30■■■□□ 2.39
TMEM54-202ENST00000373463 NUTM2GQ5VZR2 741 aa30■■■□□ 2.39
TMEM54-202ENST00000373463 QTRT2Q9H974 415 aaKnown RBP29.99■■■□□ 2.39
TMEM54-202ENST00000373463 MON2Q7Z3U7 1717 aa29.99■■■□□ 2.39
TMEM54-202ENST00000373463 PIK3C2AO00443 1686 aa29.98■■■□□ 2.39
TMEM54-202ENST00000373463 ATRNO75882 1429 aa29.98■■■□□ 2.39
TMEM54-202ENST00000373463 HAP1P54257 671 aaPredicted RBP29.98■■■□□ 2.39
TMEM54-202ENST00000373463 BRD4O60885 1362 aaPredicted RBP29.98■■■□□ 2.39
TMEM54-202ENST00000373463 NWD2Q9ULI1 1742 aa29.96■■■□□ 2.39
TMEM54-202ENST00000373463 ABTB2Q8N961 1025 aa29.95■■■□□ 2.39
TMEM54-202ENST00000373463 PUS7Q96PZ0 661 aaKnown RBP29.95■■■□□ 2.39
TMEM54-202ENST00000373463 FAM83GA6ND36 823 aa29.94■■■□□ 2.38
TMEM54-202ENST00000373463 RXRBP28702 533 aa29.94■■■□□ 2.38
TMEM54-202ENST00000373463 USP19O94966 1318 aa29.94■■■□□ 2.38
TMEM54-202ENST00000373463 SLC12A5Q9H2X9 1139 aa29.93■■■□□ 2.38
TMEM54-202ENST00000373463 NRAPQ86VF7 1730 aa29.93■■■□□ 2.38
TMEM54-202ENST00000373463 COL14A1Q05707 1796 aaKnown RBP29.92■■■□□ 2.38
TMEM54-202ENST00000373463 CDK12Q9NYV4 1490 aaPredicted RBP29.92■■■□□ 2.38
TMEM54-202ENST00000373463 ZNF692Q9BU19 519 aaPredicted RBP29.91■■■□□ 2.38
TMEM54-202ENST00000373463 TRPC5Q9UL62 973 aaPredicted RBP29.91■■■□□ 2.38
TMEM54-202ENST00000373463 TTC21BQ7Z4L5 1316 aa29.91■■■□□ 2.38
TMEM54-202ENST00000373463 RBM6P78332 1123 aaKnown RBP29.9■■■□□ 2.38
TMEM54-202ENST00000373463 KTN1Q86UP2 1357 aaKnown RBP29.9■■■□□ 2.38
TMEM54-202ENST00000373463 UNC5CLQ8IV45 518 aa29.89■■■□□ 2.38
TMEM54-202ENST00000373463 RGS12O14924 1447 aa29.88■■■□□ 2.37
TMEM54-202ENST00000373463 TMC1Q8TDI8 760 aa29.88■■■□□ 2.37
TMEM54-202ENST00000373463 GLI3P10071 1580 aa29.88■■■□□ 2.37
TMEM54-202ENST00000373463 KIAA0232Q92628 1395 aa29.88■■■□□ 2.37
TMEM54-202ENST00000373463 SLIT3O75094 1523 aa29.87■■■□□ 2.37
TMEM54-202ENST00000373463 SLC24A1O60721 1099 aa29.86■■■□□ 2.37
TMEM54-202ENST00000373463 A0A1W2PP64 1363 aa29.86■■■□□ 2.37
TMEM54-202ENST00000373463 NLRP13Q86W25 1043 aa29.85■■■□□ 2.37
TMEM54-202ENST00000373463 ZC3H6P61129 1189 aaKnown RBP29.84■■■□□ 2.37
TMEM54-202ENST00000373463 TMF1P82094 1093 aa29.84■■■□□ 2.37
TMEM54-202ENST00000373463 TTC21AQ8NDW8 1320 aa29.83■■■□□ 2.37
TMEM54-202ENST00000373463 NLRP6P59044 892 aa29.83■■■□□ 2.37
TMEM54-202ENST00000373463 PRDM11Q9NQV5 511 aa29.82■■■□□ 2.36
TMEM54-202ENST00000373463 MYOM1P52179 1685 aa29.82■■■□□ 2.36
TMEM54-202ENST00000373463 USP54Q70EL1 1684 aa29.82■■■□□ 2.36
TMEM54-202ENST00000373463 LMO7Q8WWI1 1683 aa29.82■■■□□ 2.36
TMEM54-202ENST00000373463 NINLQ9Y2I6 1382 aa29.81■■■□□ 2.36
TMEM54-202ENST00000373463 GCP02774 474 aa29.81■■■□□ 2.36
TMEM54-202ENST00000373463 CHRNA2Q15822 529 aa29.81■■■□□ 2.36
TMEM54-202ENST00000373463 GJD4Q96KN9 370 aaPredicted RBP29.81■■■□□ 2.36
TMEM54-202ENST00000373463 BTG4Q9NY30 223 aa29.81■■■□□ 2.36
TMEM54-202ENST00000373463 CPDO75976 1380 aa29.8■■■□□ 2.36
TMEM54-202ENST00000373463 EDC4Q6P2E9 1401 aaKnown RBP29.79■■■□□ 2.36
TMEM54-202ENST00000373463 VPS72Q15906 364 aa29.79■■■□□ 2.36
TMEM54-202ENST00000373463 ZRANB1Q9UGI0 708 aa29.79■■■□□ 2.36
TMEM54-202ENST00000373463 HSPA5P11021 654 aaKnown RBP29.78■■■□□ 2.36
TMEM54-202ENST00000373463 HDGFL2Q7Z4V5 671 aaPredicted RBP29.78■■■□□ 2.36
TMEM54-202ENST00000373463 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.78■■■□□ 2.36
TMEM54-202ENST00000373463 TERF2IPQ9NYB0 399 aa29.78■■■□□ 2.36
TMEM54-202ENST00000373463 CAMTA1Q9Y6Y1 1673 aa29.77■■■□□ 2.36
TMEM54-202ENST00000373463 NME9Q86XW9 330 aa29.76■■■□□ 2.35
TMEM54-202ENST00000373463 EIF4G2P78344 907 aaKnown RBP eCLIP29.75■■■□□ 2.35
TMEM54-202ENST00000373463 NFAT5O94916 1531 aa29.75■■■□□ 2.35
TMEM54-202ENST00000373463 USP31Q70CQ4 1352 aa29.75■■■□□ 2.35
TMEM54-202ENST00000373463 COL18A1P39060 1754 aa29.74■■■□□ 2.35
TMEM54-202ENST00000373463 ANKRD36BQ8N2N9 1353 aa29.74■■■□□ 2.35
TMEM54-202ENST00000373463 CDCA8Q53HL2 280 aa29.7■■■□□ 2.35
TMEM54-202ENST00000373463 OVOS2A0A0J9YW53 1432 aa29.7■■■□□ 2.34
TMEM54-202ENST00000373463 OVOS2Q6IE36 1432 aa29.7■■■□□ 2.34
TMEM54-202ENST00000373463 BRWD3Q6RI45 1802 aa29.68■■■□□ 2.34
TMEM54-202ENST00000373463 CCDC9Q9Y3X0 531 aaKnown RBP29.67■■■□□ 2.34
TMEM54-202ENST00000373463 SPATA31A5Q5VU36 1347 aa29.67■■■□□ 2.34
TMEM54-202ENST00000373463 SPATA31A7Q8IWB4 1347 aa29.67■■■□□ 2.34
TMEM54-202ENST00000373463 ARHGEF25Q86VW2 580 aa29.66■■■□□ 2.34
TMEM54-202ENST00000373463 AATKQ6ZMQ8 1374 aa29.65■■■□□ 2.34
TMEM54-202ENST00000373463 SOX12O15370 315 aa29.65■■■□□ 2.34
TMEM54-202ENST00000373463 ONECUT3O60422 494 aaPredicted RBP29.65■■■□□ 2.34
TMEM54-202ENST00000373463 COL5A2P05997 1499 aaPredicted RBP29.65■■■□□ 2.34
TMEM54-202ENST00000373463 RGPD5Q99666 1765 aa29.64■■■□□ 2.34
TMEM54-202ENST00000373463 STRN4Q9NRL3 753 aa29.64■■■□□ 2.34
TMEM54-202ENST00000373463 C11orf95C9JLR9 678 aaPredicted RBP29.63■■■□□ 2.33
TMEM54-202ENST00000373463 KCNH5Q8NCM2 988 aa29.63■■■□□ 2.33
TMEM54-202ENST00000373463 ZBTB7CA1YPR0 619 aa29.62■■■□□ 2.33
TMEM54-202ENST00000373463 CARD14Q9BXL6 1004 aa29.62■■■□□ 2.33
TMEM54-202ENST00000373463 THSD7AQ9UPZ6 1657 aa29.61■■■□□ 2.33
TMEM54-202ENST00000373463 AXIN2Q9Y2T1 843 aa29.61■■■□□ 2.33
TMEM54-202ENST00000373463 SPATA31A1Q5TZJ5 1347 aa29.61■■■□□ 2.33
TMEM54-202ENST00000373463 LTN1O94822 1766 aa29.6■■■□□ 2.33
TMEM54-202ENST00000373463 LARP1Q6PKG0 1096 aaKnown RBP29.6■■■□□ 2.33
TMEM54-202ENST00000373463 SEPT12Q8IYM1 358 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms