RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 NGDNQ8NEJ9 315 aaKnown RBP25.89■■□□□ 1.74
TRAPPC3-202ENST00000373162 RALGAPBQ86X10 1494 aa25.89■■□□□ 1.73
TRAPPC3-202ENST00000373162 ACEP12821 1306 aa25.88■■□□□ 1.73
TRAPPC3-202ENST00000373162 COL14A1Q05707 1796 aaKnown RBP25.87■■□□□ 1.73
TRAPPC3-202ENST00000373162 ROCK2O75116 1388 aaKnown RBP25.87■■□□□ 1.73
TRAPPC3-202ENST00000373162 GJD4Q96KN9 370 aaPredicted RBP25.86■■□□□ 1.73
TRAPPC3-202ENST00000373162 PPIP5K1Q6PFW1 1433 aa25.85■■□□□ 1.73
TRAPPC3-202ENST00000373162 LMOD2Q6P5Q4 547 aa25.84■■□□□ 1.73
TRAPPC3-202ENST00000373162 SBNO2Q9Y2G9 1366 aa25.83■■□□□ 1.73
TRAPPC3-202ENST00000373162 FAM83GA6ND36 823 aa25.83■■□□□ 1.73
TRAPPC3-202ENST00000373162 NRKQ7Z2Y5 1582 aa25.82■■□□□ 1.72
TRAPPC3-202ENST00000373162 CABP2Q9NPB3 220 aa25.82■■□□□ 1.72
TRAPPC3-202ENST00000373162 SSH2Q76I76 1423 aa25.81■■□□□ 1.72
TRAPPC3-202ENST00000373162 VPS72Q15906 364 aa25.81■■□□□ 1.72
TRAPPC3-202ENST00000373162 BRD4O60885 1362 aaPredicted RBP25.79■■□□□ 1.72
TRAPPC3-202ENST00000373162 BRWD3Q6RI45 1802 aa25.79■■□□□ 1.72
TRAPPC3-202ENST00000373162 HAP1P54257 671 aaPredicted RBP25.78■■□□□ 1.72
TRAPPC3-202ENST00000373162 SRPK2P78362 688 aaKnown RBP25.78■■□□□ 1.72
TRAPPC3-202ENST00000373162 USP19O94966 1318 aa25.78■■□□□ 1.72
TRAPPC3-202ENST00000373162 USP6P35125 1406 aa25.78■■□□□ 1.72
TRAPPC3-202ENST00000373162 EP400Q96L91 3159 aa25.77■■□□□ 1.72
TRAPPC3-202ENST00000373162 ATAD2Q6PL18 1390 aa25.77■■□□□ 1.72
TRAPPC3-202ENST00000373162 TONSLQ96HA7 1378 aa25.77■■□□□ 1.72
TRAPPC3-202ENST00000373162 AKAP12Q02952 1782 aa25.77■■□□□ 1.72
TRAPPC3-202ENST00000373162 ONECUT3O60422 494 aaPredicted RBP25.76■■□□□ 1.71
TRAPPC3-202ENST00000373162 PAK3O75914 559 aaPredicted RBP25.76■■□□□ 1.71
TRAPPC3-202ENST00000373162 LMO7Q8WWI1 1683 aa25.75■■□□□ 1.71
TRAPPC3-202ENST00000373162 EVC2Q86UK5 1308 aa25.75■■□□□ 1.71
TRAPPC3-202ENST00000373162 PLEKHG5O94827 1062 aa25.75■■□□□ 1.71
TRAPPC3-202ENST00000373162 PIK3C2AO00443 1686 aa25.74■■□□□ 1.71
TRAPPC3-202ENST00000373162 SRCAPQ6ZRS2 3230 aa25.73■■□□□ 1.71
TRAPPC3-202ENST00000373162 SLIT3O75094 1523 aa25.73■■□□□ 1.71
TRAPPC3-202ENST00000373162 KIAA0232Q92628 1395 aa25.72■■□□□ 1.71
TRAPPC3-202ENST00000373162 CABP1Q9NZU7 370 aa25.72■■□□□ 1.71
TRAPPC3-202ENST00000373162 THSD7AQ9UPZ6 1657 aa25.71■■□□□ 1.71
TRAPPC3-202ENST00000373162 BTG4Q9NY30 223 aa25.71■■□□□ 1.71
TRAPPC3-202ENST00000373162 CPSF1Q10570 1443 aaKnown RBP25.71■■□□□ 1.71
TRAPPC3-202ENST00000373162 CPDO75976 1380 aa25.7■■□□□ 1.71
TRAPPC3-202ENST00000373162 MON2Q7Z3U7 1717 aa25.68■■□□□ 1.7
TRAPPC3-202ENST00000373162 NUTM2GQ5VZR2 741 aa25.68■■□□□ 1.7
TRAPPC3-202ENST00000373162 CARD11Q9BXL7 1154 aa25.68■■□□□ 1.7
TRAPPC3-202ENST00000373162 PRDM11Q9NQV5 511 aa25.67■■□□□ 1.7
TRAPPC3-202ENST00000373162 CD163L1Q9NR16 1453 aa25.66■■□□□ 1.7
TRAPPC3-202ENST00000373162 ABTB2Q8N961 1025 aa25.66■■□□□ 1.7
TRAPPC3-202ENST00000373162 CAMTA1Q9Y6Y1 1673 aa25.66■■□□□ 1.7
TRAPPC3-202ENST00000373162 SPATA31A5Q5VU36 1347 aa25.65■■□□□ 1.7
TRAPPC3-202ENST00000373162 SPATA31A7Q8IWB4 1347 aa25.65■■□□□ 1.7
TRAPPC3-202ENST00000373162 SEPT12Q8IYM1 358 aa25.65■■□□□ 1.7
TRAPPC3-202ENST00000373162 USP54Q70EL1 1684 aa25.64■■□□□ 1.7
TRAPPC3-202ENST00000373162 COL18A1P39060 1754 aa25.62■■□□□ 1.69
TRAPPC3-202ENST00000373162 CHRNA2Q15822 529 aa25.62■■□□□ 1.69
TRAPPC3-202ENST00000373162 ZC3H6P61129 1189 aaKnown RBP25.61■■□□□ 1.69
TRAPPC3-202ENST00000373162 NLRP13Q86W25 1043 aa25.61■■□□□ 1.69
TRAPPC3-202ENST00000373162 GCP02774 474 aa25.6■■□□□ 1.69
TRAPPC3-202ENST00000373162 TESK2Q96S53 571 aa25.6■■□□□ 1.69
TRAPPC3-202ENST00000373162 SPATA31A1Q5TZJ5 1347 aa25.59■■□□□ 1.69
TRAPPC3-202ENST00000373162 TTC21BQ7Z4L5 1316 aa25.59■■□□□ 1.69
TRAPPC3-202ENST00000373162 ZNF692Q9BU19 519 aaPredicted RBP25.58■■□□□ 1.69
TRAPPC3-202ENST00000373162 PUS7Q96PZ0 661 aaKnown RBP25.57■■□□□ 1.68
TRAPPC3-202ENST00000373162 CCDC9Q9Y3X0 531 aaKnown RBP25.57■■□□□ 1.68
TRAPPC3-202ENST00000373162 COL5A2P05997 1499 aaPredicted RBP25.57■■□□□ 1.68
TRAPPC3-202ENST00000373162 NFAT5O94916 1531 aa25.57■■□□□ 1.68
TRAPPC3-202ENST00000373162 BLMP54132 1417 aaPredicted RBP25.56■■□□□ 1.68
TRAPPC3-202ENST00000373162 FAM98CQ17RN3 349 aaKnown RBP25.56■■□□□ 1.68
TRAPPC3-202ENST00000373162 CCDC125Q86Z20 511 aa25.55■■□□□ 1.68
TRAPPC3-202ENST00000373162 TTC21AQ8NDW8 1320 aa25.55■■□□□ 1.68
TRAPPC3-202ENST00000373162 CLSPNQ9HAW4 1339 aa25.55■■□□□ 1.68
TRAPPC3-202ENST00000373162 AATKQ6ZMQ8 1374 aa25.54■■□□□ 1.68
TRAPPC3-202ENST00000373162 NLRP6P59044 892 aa25.53■■□□□ 1.68
TRAPPC3-202ENST00000373162 KRT27Q7Z3Y8 459 aa25.53■■□□□ 1.68
TRAPPC3-202ENST00000373162 KTN1Q86UP2 1357 aaKnown RBP25.53■■□□□ 1.68
TRAPPC3-202ENST00000373162 USP31Q70CQ4 1352 aa25.52■■□□□ 1.68
TRAPPC3-202ENST00000373162 ST20-MTHFSA0A0A6YYL1 179 aa25.5■■□□□ 1.67
TRAPPC3-202ENST00000373162 ABCC6O95255 1503 aa25.49■■□□□ 1.67
TRAPPC3-202ENST00000373162 LARP1Q6PKG0 1096 aaKnown RBP25.48■■□□□ 1.67
TRAPPC3-202ENST00000373162 BARGINQ6ZT62 677 aa25.48■■□□□ 1.67
TRAPPC3-202ENST00000373162 STRN4Q9NRL3 753 aa25.48■■□□□ 1.67
TRAPPC3-202ENST00000373162 TIMELESSQ9UNS1 1208 aa25.48■■□□□ 1.67
TRAPPC3-202ENST00000373162 PARP4Q9UKK3 1724 aaKnown RBP25.48■■□□□ 1.67
TRAPPC3-202ENST00000373162 EDC4Q6P2E9 1401 aaKnown RBP25.47■■□□□ 1.67
TRAPPC3-202ENST00000373162 A0A1W2PP64 1363 aa25.47■■□□□ 1.67
TRAPPC3-202ENST00000373162 TNS1Q9HBL0 1735 aaKnown RBP25.47■■□□□ 1.67
TRAPPC3-202ENST00000373162 SLC12A5Q9H2X9 1139 aa25.47■■□□□ 1.67
TRAPPC3-202ENST00000373162 USP47Q96K76 1375 aa25.46■■□□□ 1.67
TRAPPC3-202ENST00000373162 ARHGEF25Q86VW2 580 aa25.46■■□□□ 1.67
TRAPPC3-202ENST00000373162 WNK3Q9BYP7 1800 aa25.46■■□□□ 1.67
TRAPPC3-202ENST00000373162 RGPD5Q99666 1765 aa25.45■■□□□ 1.66
TRAPPC3-202ENST00000373162 RGPD1P0DJD0 1748 aa25.45■■□□□ 1.66
TRAPPC3-202ENST00000373162 CRB1P82279 1406 aa25.45■■□□□ 1.66
TRAPPC3-202ENST00000373162 NINLQ9Y2I6 1382 aa25.44■■□□□ 1.66
TRAPPC3-202ENST00000373162 OVOS2A0A0J9YW53 1432 aa25.44■■□□□ 1.66
TRAPPC3-202ENST00000373162 OVOS2Q6IE36 1432 aa25.44■■□□□ 1.66
TRAPPC3-202ENST00000373162 AXIN2Q9Y2T1 843 aa25.43■■□□□ 1.66
TRAPPC3-202ENST00000373162 ZRANB1Q9UGI0 708 aa25.42■■□□□ 1.66
TRAPPC3-202ENST00000373162 DISP2A7MBM2 1401 aa25.41■■□□□ 1.66
TRAPPC3-202ENST00000373162 KCNH5Q8NCM2 988 aa25.41■■□□□ 1.66
TRAPPC3-202ENST00000373162 THRAP3Q9Y2W1 955 aaKnown RBP25.41■■□□□ 1.66
TRAPPC3-202ENST00000373162 LRRC37A3O60309 1634 aa25.41■■□□□ 1.66
TRAPPC3-202ENST00000373162 NME9Q86XW9 330 aa25.4■■□□□ 1.66
TRAPPC3-202ENST00000373162 TCP11L2Q8N4U5 519 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms