RNA–Protein interactions for RNA: ENST00000373097.5

PCDH11X-206, Transcript of protocadherin 11 X-linked, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 9,146 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH11X-206	ENST00000373097	KNSTRN	Q9Y448	316 aa		4.9	□□□□□ -1.62
PCDH11X-206	ENST00000373097	FOXD4	Q12950	439 aa	Predicted RBP	4.9	□□□□□ -1.62
PCDH11X-206	ENST00000373097	FAM184A	Q8NB25	1140 aa		4.9	□□□□□ -1.62
PCDH11X-206	ENST00000373097	KRT18	P05783	430 aa	Known RBP	4.9	□□□□□ -1.62
PCDH11X-206	ENST00000373097	SYCP1	Q15431	976 aa		4.9	□□□□□ -1.62
PCDH11X-206	ENST00000373097	SPOUT1	Q5T280	376 aa	Known RBP	4.9	□□□□□ -1.62
PCDH11X-206	ENST00000373097	RNF214	Q8ND24	703 aa		4.9	□□□□□ -1.62
PCDH11X-206	ENST00000373097	SFMBT1	Q9UHJ3	866 aa		4.9	□□□□□ -1.62
PCDH11X-206	ENST00000373097	HDAC5	Q9UQL6	1122 aa		4.9	□□□□□ -1.62
PCDH11X-206	ENST00000373097	PPFIA1	Q13136	1202 aa		4.9	□□□□□ -1.63
PCDH11X-206	ENST00000373097	EID1	Q9Y6B2	187 aa		4.9	□□□□□ -1.63
PCDH11X-206	ENST00000373097	USP5	P45974	858 aa		4.89	□□□□□ -1.63
PCDH11X-206	ENST00000373097	PDE1C	Q14123	709 aa	Predicted RBP	4.89	□□□□□ -1.63
PCDH11X-206	ENST00000373097	UBE4A	Q14139	1066 aa		4.89	□□□□□ -1.63
PCDH11X-206	ENST00000373097	CSPP1	Q1MSJ5	1256 aa		4.89	□□□□□ -1.63
PCDH11X-206	ENST00000373097	CCDC113	Q9H0I3	377 aa		4.89	□□□□□ -1.63
PCDH11X-206	ENST00000373097	TTC36	A6NLP5	189 aa		4.89	□□□□□ -1.63
PCDH11X-206	ENST00000373097	ANAPC15	P60006	121 aa		4.89	□□□□□ -1.63
PCDH11X-206	ENST00000373097	SYNE3	Q6ZMZ3	975 aa		4.89	□□□□□ -1.63
PCDH11X-206	ENST00000373097	ANKRD12	Q6UB98	2062 aa		4.89	□□□□□ -1.63
PCDH11X-206	ENST00000373097	GOLGA6L9	A6NEM1	432 aa		4.89	□□□□□ -1.63
PCDH11X-206	ENST00000373097	ELL2	O00472	640 aa	Predicted RBP	4.89	□□□□□ -1.63
PCDH11X-206	ENST00000373097	FNDC3A	Q9Y2H6	1198 aa	Known RBP	4.89	□□□□□ -1.63
PCDH11X-206	ENST00000373097	RSF1	Q96T23	1441 aa	Predicted RBP	4.89	□□□□□ -1.63
PCDH11X-206	ENST00000373097	DIXDC1	Q155Q3	683 aa		4.89	□□□□□ -1.63
PCDH11X-206	ENST00000373097	GPATCH3	Q96I76	525 aa		4.89	□□□□□ -1.63
PCDH11X-206	ENST00000373097	CCDC173	Q0VFZ6	552 aa		4.89	□□□□□ -1.63
PCDH11X-206	ENST00000373097	TMEM259	Q4ZIN3	620 aa		4.89	□□□□□ -1.63
PCDH11X-206	ENST00000373097	KIF20A	O95235	890 aa		4.89	□□□□□ -1.63
PCDH11X-206	ENST00000373097	LCA5	Q86VQ0	697 aa		4.89	□□□□□ -1.63
PCDH11X-206	ENST00000373097	PMFBP1	Q8TBY8	1022 aa		4.89	□□□□□ -1.63
PCDH11X-206	ENST00000373097	DDX11L8	A8MPP1	907 aa		4.89	□□□□□ -1.63
PCDH11X-206	ENST00000373097	IRX3	P78415	501 aa	Predicted RBP	4.89	□□□□□ -1.63
PCDH11X-206	ENST00000373097	TCHP	Q9BT92	498 aa		4.89	□□□□□ -1.63
PCDH11X-206	ENST00000373097	OFD1	O75665	1012 aa		4.88	□□□□□ -1.63
PCDH11X-206	ENST00000373097	EZR	P15311	586 aa	Known RBP	4.88	□□□□□ -1.63
PCDH11X-206	ENST00000373097	SEMA3F	Q13275	785 aa		4.88	□□□□□ -1.63
PCDH11X-206	ENST00000373097	WHAMM	Q8TF30	809 aa		4.88	□□□□□ -1.63
PCDH11X-206	ENST00000373097	NUP133	Q8WUM0	1156 aa		4.88	□□□□□ -1.63
PCDH11X-206	ENST00000373097	OTUD6B	Q8N6M0	293 aa		4.88	□□□□□ -1.63
PCDH11X-206	ENST00000373097	TIGD1	Q96MW7	591 aa		4.88	□□□□□ -1.63
PCDH11X-206	ENST00000373097	CHMP4B	Q9H444	224 aa	Known RBP	4.88	□□□□□ -1.63
PCDH11X-206	ENST00000373097	VGLL3	A8MV65	326 aa		4.88	□□□□□ -1.63
PCDH11X-206	ENST00000373097	MICALL1	Q8N3F8	863 aa		4.88	□□□□□ -1.63
PCDH11X-206	ENST00000373097	CCDC102A	Q96A19	550 aa		4.88	□□□□□ -1.63
PCDH11X-206	ENST00000373097	BEGAIN	Q9BUH8	593 aa		4.88	□□□□□ -1.63
PCDH11X-206	ENST00000373097	CCDC146	Q8IYE0	955 aa		4.88	□□□□□ -1.63
PCDH11X-206	ENST00000373097	CFAP57	Q96MR6	1250 aa		4.88	□□□□□ -1.63
PCDH11X-206	ENST00000373097	PPME1	Q9Y570	386 aa		4.88	□□□□□ -1.63
PCDH11X-206	ENST00000373097	RBM26	Q5T8P6	1007 aa	Known RBP	4.88	□□□□□ -1.63
PCDH11X-206	ENST00000373097	BICD2	Q8TD16	824 aa		4.88	□□□□□ -1.63
PCDH11X-206	ENST00000373097	FMNL2	Q96PY5	1086 aa		4.88	□□□□□ -1.63
PCDH11X-206	ENST00000373097	LRRFIP2	Q9Y608	721 aa	Known RBP	4.88	□□□□□ -1.63
PCDH11X-206	ENST00000373097	C1orf141	Q5JVX7	400 aa		4.88	□□□□□ -1.63
PCDH11X-206	ENST00000373097	BMS1	Q14692	1282 aa	Known RBP	4.88	□□□□□ -1.63
PCDH11X-206	ENST00000373097	NAA25	Q14CX7	972 aa		4.87	□□□□□ -1.63
PCDH11X-206	ENST00000373097	WDR66	Q8TBY9	1149 aa		4.87	□□□□□ -1.63
PCDH11X-206	ENST00000373097	ZNF692	Q9BU19	519 aa	Predicted RBP	4.87	□□□□□ -1.63
PCDH11X-206	ENST00000373097	PPP2R5C	Q13362	524 aa		4.87	□□□□□ -1.63
PCDH11X-206	ENST00000373097	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	4.87	□□□□□ -1.63
PCDH11X-206	ENST00000373097	LETM1	O95202	739 aa	Predicted RBP	4.87	□□□□□ -1.63
PCDH11X-206	ENST00000373097	GBP2	P32456	591 aa	Predicted RBP	4.87	□□□□□ -1.63
PCDH11X-206	ENST00000373097	GTF2A1	P52655	376 aa	Predicted RBP	4.87	□□□□□ -1.63
PCDH11X-206	ENST00000373097	PRKG1	Q13976	671 aa		4.87	□□□□□ -1.63
PCDH11X-206	ENST00000373097	TRIM29	Q14134	588 aa		4.87	□□□□□ -1.63
PCDH11X-206	ENST00000373097	MORC4	Q8TE76	937 aa		4.87	□□□□□ -1.63
PCDH11X-206	ENST00000373097	SYNDIG1	Q9H7V2	258 aa		4.87	□□□□□ -1.63
PCDH11X-206	ENST00000373097	EIF3J	O75822	258 aa	Known RBP	4.87	□□□□□ -1.63
PCDH11X-206	ENST00000373097	ITM2B	Q9Y287	266 aa		4.87	□□□□□ -1.63
PCDH11X-206	ENST00000373097	ERICH2	A1L162	156 aa		4.87	□□□□□ -1.63
PCDH11X-206	ENST00000373097	ANKRD20A12P	Q8NF67	263 aa		4.87	□□□□□ -1.63
PCDH11X-206	ENST00000373097	LRRCC1	Q9C099	1032 aa		4.87	□□□□□ -1.63
PCDH11X-206	ENST00000373097	PRPF40A	O75400	957 aa	Known RBP	4.87	□□□□□ -1.63
PCDH11X-206	ENST00000373097	SEPT10	Q9P0V9	454 aa		4.87	□□□□□ -1.63
PCDH11X-206	ENST00000373097	HEATR1	Q9H583	2144 aa	Known RBP	4.86	□□□□□ -1.63
PCDH11X-206	ENST00000373097	CCP110	O43303	1012 aa		4.86	□□□□□ -1.63
PCDH11X-206	ENST00000373097	MAP2K1	Q02750	393 aa	Predicted RBP	4.86	□□□□□ -1.63
PCDH11X-206	ENST00000373097	PLS1	Q14651	629 aa		4.86	□□□□□ -1.63
PCDH11X-206	ENST00000373097	CDK5RAP3	Q96JB5	506 aa		4.86	□□□□□ -1.63
PCDH11X-206	ENST00000373097	CFDP1	Q9UEE9	299 aa	Predicted RBP	4.86	□□□□□ -1.63
PCDH11X-206	ENST00000373097	PABPN1L	A6NDY0	278 aa	Known RBP	4.86	□□□□□ -1.63
PCDH11X-206	ENST00000373097	NEUROD6	Q96NK8	337 aa		4.86	□□□□□ -1.63
PCDH11X-206	ENST00000373097	AGRP	O00253	132 aa		4.86	□□□□□ -1.63
PCDH11X-206	ENST00000373097	SMC2	O95347	1197 aa		4.86	□□□□□ -1.63
PCDH11X-206	ENST00000373097	PRPF38A	Q8NAV1	312 aa	Known RBP	4.86	□□□□□ -1.63
PCDH11X-206	ENST00000373097	TANGO6	Q9C0B7	1094 aa		4.86	□□□□□ -1.63
PCDH11X-206	ENST00000373097	FAM170A	A1A519	330 aa		4.86	□□□□□ -1.63
PCDH11X-206	ENST00000373097	ADAMTS2	O95450	1211 aa		4.86	□□□□□ -1.63
PCDH11X-206	ENST00000373097	SSB	P05455	408 aa	Known RBP eCLIP	4.86	□□□□□ -1.63
PCDH11X-206	ENST00000373097	ZNF76	P36508	570 aa		4.86	□□□□□ -1.63
PCDH11X-206	ENST00000373097	MNAT1	P51948	309 aa		4.86	□□□□□ -1.63
PCDH11X-206	ENST00000373097	TAF12	Q16514	161 aa		4.86	□□□□□ -1.63
PCDH11X-206	ENST00000373097	FAM114A1	Q8IWE2	563 aa		4.86	□□□□□ -1.63
PCDH11X-206	ENST00000373097	POLR3G	O15318	223 aa	Predicted RBP	4.86	□□□□□ -1.63
PCDH11X-206	ENST00000373097	CFAP58	Q5T655	872 aa		4.86	□□□□□ -1.63
PCDH11X-206	ENST00000373097	CCDC181	Q5TID7	509 aa		4.86	□□□□□ -1.63
PCDH11X-206	ENST00000373097	DDX54	Q8TDD1	881 aa	Known RBP	4.86	□□□□□ -1.63
PCDH11X-206	ENST00000373097	ST18	O60284	1047 aa		4.86	□□□□□ -1.63
PCDH11X-206	ENST00000373097	NAP1L3	Q99457	506 aa	Predicted RBP	4.86	□□□□□ -1.63
PCDH11X-206	ENST00000373097	CLIP1	P30622	1438 aa		4.86	□□□□□ -1.63

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