RNA–Protein interactions for RNA: ENST00000373034.8

PCDH19-202, Transcript of protocadherin 19, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH19, Length 9,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19-202ENST00000373034 FAM193AP78312 1265 aa18.27■□□□□ 0.52
PCDH19-202ENST00000373034 ERICH4A6NGS2 130 aa18.27■□□□□ 0.51
PCDH19-202ENST00000373034 CRACR2AQ9BSW2 395 aa18.27■□□□□ 0.51
PCDH19-202ENST00000373034 CARMIL2Q6F5E8 1435 aa18.27■□□□□ 0.51
PCDH19-202ENST00000373034 CCDC18Q5T9S5 1454 aa18.26■□□□□ 0.51
PCDH19-202ENST00000373034 CALCOCO1Q9P1Z2 691 aa18.26■□□□□ 0.51
PCDH19-202ENST00000373034 TRIM21P19474 475 aaKnown RBP18.26■□□□□ 0.51
PCDH19-202ENST00000373034 CFAP57Q96MR6 1250 aa18.26■□□□□ 0.51
PCDH19-202ENST00000373034 FMNL2Q96PY5 1086 aa18.26■□□□□ 0.51
PCDH19-202ENST00000373034 KIF2AO00139 706 aaPredicted RBP18.26■□□□□ 0.51
PCDH19-202ENST00000373034 EVC2Q86UK5 1308 aa18.26■□□□□ 0.51
PCDH19-202ENST00000373034 CCDC148Q8NFR7 591 aa18.26■□□□□ 0.51
PCDH19-202ENST00000373034 SEPT11Q9NVA2 429 aaKnown RBP18.26■□□□□ 0.51
PCDH19-202ENST00000373034 ANKRD1Q15327 319 aa18.25■□□□□ 0.51
PCDH19-202ENST00000373034 PDCL3Q9H2J4 239 aa18.25■□□□□ 0.51
PCDH19-202ENST00000373034 TNMDQ9H2S6 317 aa18.25■□□□□ 0.51
PCDH19-202ENST00000373034 CCDC144AA2RUR9 1427 aa18.25■□□□□ 0.51
PCDH19-202ENST00000373034 EVA1CP58658 441 aa18.25■□□□□ 0.51
PCDH19-202ENST00000373034 CCDC27Q2M243 656 aa18.24■□□□□ 0.51
PCDH19-202ENST00000373034 CFAP45Q9UL16 551 aa18.24■□□□□ 0.51
PCDH19-202ENST00000373034 AEBP1Q8IUX7 1158 aa18.24■□□□□ 0.51
PCDH19-202ENST00000373034 IKQ13123 557 aaPredicted RBP18.23■□□□□ 0.51
PCDH19-202ENST00000373034 FKBP5Q13451 457 aaPredicted RBP18.23■□□□□ 0.51
PCDH19-202ENST00000373034 ZNF397Q8NF99 534 aaPredicted RBP18.23■□□□□ 0.51
PCDH19-202ENST00000373034 WASHC4Q2M389 1173 aa18.23■□□□□ 0.51
PCDH19-202ENST00000373034 ELL2O00472 640 aaPredicted RBP18.23■□□□□ 0.51
PCDH19-202ENST00000373034 PDIA4P13667 645 aaKnown RBP18.23■□□□□ 0.51
PCDH19-202ENST00000373034 EIF2S2P20042 333 aaKnown RBP18.22■□□□□ 0.51
PCDH19-202ENST00000373034 PRPF40AO75400 957 aaKnown RBP18.21■□□□□ 0.51
PCDH19-202ENST00000373034 STK38Q15208 465 aa18.21■□□□□ 0.51
PCDH19-202ENST00000373034 LUZP1Q86V48 1076 aa18.21■□□□□ 0.51
PCDH19-202ENST00000373034 TBC1D2BQ9UPU7 963 aa18.21■□□□□ 0.51
PCDH19-202ENST00000373034 KIAA1328Q86T90 577 aa18.21■□□□□ 0.51
PCDH19-202ENST00000373034 PANK3Q9H999 370 aa18.2■□□□□ 0.5
PCDH19-202ENST00000373034 CCDC97Q96F63 343 aaPredicted RBP18.2■□□□□ 0.5
PCDH19-202ENST00000373034 GCOM1H8Y6P7 765 aaPredicted RBP18.2■□□□□ 0.5
PCDH19-202ENST00000373034 MYZAPP0CAP1 466 aa18.2■□□□□ 0.5
PCDH19-202ENST00000373034 IMMTQ16891 758 aaKnown RBP18.2■□□□□ 0.5
PCDH19-202ENST00000373034 WASHC2AQ641Q2 1341 aa18.2■□□□□ 0.5
PCDH19-202ENST00000373034 UBXN4Q92575 508 aa18.2■□□□□ 0.5
PCDH19-202ENST00000373034 ANKRD18BA2A2Z9 1011 aa18.19■□□□□ 0.5
PCDH19-202ENST00000373034 PRDM2Q13029 1718 aa18.19■□□□□ 0.5
PCDH19-202ENST00000373034 RSPH4AQ5TD94 716 aa18.19■□□□□ 0.5
PCDH19-202ENST00000373034 TANGO6Q9C0B7 1094 aa18.19■□□□□ 0.5
PCDH19-202ENST00000373034 LNPKQ9C0E8 428 aa18.19■□□□□ 0.5
PCDH19-202ENST00000373034 FAM177A1Q8N128 213 aaPredicted RBP18.19■□□□□ 0.5
PCDH19-202ENST00000373034 CETN2P41208 172 aa18.19■□□□□ 0.5
PCDH19-202ENST00000373034 WDR33Q9C0J8 1336 aaKnown RBP18.19■□□□□ 0.5
PCDH19-202ENST00000373034 EPB41L2O43491 1005 aaKnown RBP18.18■□□□□ 0.5
PCDH19-202ENST00000373034 DNAI2Q9GZS0 605 aa18.18■□□□□ 0.5
PCDH19-202ENST00000373034 TICAM2Q86XR7 235 aa18.18■□□□□ 0.5
PCDH19-202ENST00000373034 GRPEL1Q9HAV7 217 aa18.18■□□□□ 0.5
PCDH19-202ENST00000373034 DHX37Q8IY37 1157 aaKnown RBP18.18■□□□□ 0.5
PCDH19-202ENST00000373034 SMTNL1A8MU46 457 aa18.18■□□□□ 0.5
PCDH19-202ENST00000373034 TAF4BQ92750 862 aa18.17■□□□□ 0.5
PCDH19-202ENST00000373034 CARMIL1Q5VZK9 1371 aa18.17■□□□□ 0.5
PCDH19-202ENST00000373034 FIBPO43427 364 aa18.17■□□□□ 0.5
PCDH19-202ENST00000373034 NEBLO76041 1014 aa18.17■□□□□ 0.5
PCDH19-202ENST00000373034 TRIM22Q8IYM9 498 aa18.17■□□□□ 0.5
PCDH19-202ENST00000373034 KRT85P78386 507 aa18.17■□□□□ 0.5
PCDH19-202ENST00000373034 ME1P48163 572 aa18.17■□□□□ 0.5
PCDH19-202ENST00000373034 POTEJP0CG39 1038 aa18.17■□□□□ 0.5
PCDH19-202ENST00000373034 POLR3GO15318 223 aaPredicted RBP18.16■□□□□ 0.5
PCDH19-202ENST00000373034 SAMD1Q6SPF0 538 aaPredicted RBP18.16■□□□□ 0.5
PCDH19-202ENST00000373034 NEUROD6Q96NK8 337 aa18.16■□□□□ 0.5
PCDH19-202ENST00000373034 FYB1O15117 783 aa18.15■□□□□ 0.5
PCDH19-202ENST00000373034 RIPK4P57078 832 aa18.15■□□□□ 0.5
PCDH19-202ENST00000373034 ANAPC15P60006 121 aa18.15■□□□□ 0.5
PCDH19-202ENST00000373034 ARHGAP29Q52LW3 1261 aa18.15■□□□□ 0.5
PCDH19-202ENST00000373034 RUNDC1Q96C34 613 aa18.15■□□□□ 0.5
PCDH19-202ENST00000373034 GNAI1P63096 354 aa18.15■□□□□ 0.5
PCDH19-202ENST00000373034 ERC1Q8IUD2 1116 aa18.15■□□□□ 0.5
PCDH19-202ENST00000373034 USP47Q96K76 1375 aa18.15■□□□□ 0.5
PCDH19-202ENST00000373034 MSH5O43196 834 aa18.15■□□□□ 0.5
PCDH19-202ENST00000373034 UBTFL1P0CB47 393 aaPredicted RBP18.15■□□□□ 0.5
PCDH19-202ENST00000373034 DDX23Q9BUQ8 820 aaKnown RBP18.15■□□□□ 0.5
PCDH19-202ENST00000373034 SMC1AQ14683 1233 aaKnown RBP18.15■□□□□ 0.5
PCDH19-202ENST00000373034 CUX2O14529 1486 aa18.15■□□□□ 0.5
PCDH19-202ENST00000373034 FSD1Q9BTV5 496 aa18.14■□□□□ 0.5
PCDH19-202ENST00000373034 NEK4P51957 841 aa18.14■□□□□ 0.49
PCDH19-202ENST00000373034 GIGYF2Q6Y7W6 1299 aaKnown RBP18.14■□□□□ 0.49
PCDH19-202ENST00000373034 L3MBTL2Q969R5 705 aa18.14■□□□□ 0.49
PCDH19-202ENST00000373034 CDKL5O76039 1030 aa18.14■□□□□ 0.49
PCDH19-202ENST00000373034 CGNQ9P2M7 1197 aaKnown RBP18.14■□□□□ 0.49
PCDH19-202ENST00000373034 BRPF3Q9ULD4 1205 aa18.14■□□□□ 0.49
PCDH19-202ENST00000373034 ZSCAN12O43309 604 aa18.13■□□□□ 0.49
PCDH19-202ENST00000373034 DIAPH1O60610 1272 aaKnown RBP18.13■□□□□ 0.49
PCDH19-202ENST00000373034 CASQ1P31415 396 aa18.13■□□□□ 0.49
PCDH19-202ENST00000373034 CEP57L1Q8IYX8 460 aa18.13■□□□□ 0.49
PCDH19-202ENST00000373034 GRIPAP1Q4V328 841 aa18.13■□□□□ 0.49
PCDH19-202ENST00000373034 BMP2KQ9NSY1 1161 aaPredicted RBP18.12■□□□□ 0.49
PCDH19-202ENST00000373034 KIF18AQ8NI77 898 aa18.12■□□□□ 0.49
PCDH19-202ENST00000373034 PPP1R12BO60237 982 aaPredicted RBP18.12■□□□□ 0.49
PCDH19-202ENST00000373034 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.12■□□□□ 0.49
PCDH19-202ENST00000373034 RIC3Q7Z5B4 369 aa18.12■□□□□ 0.49
PCDH19-202ENST00000373034 MIA2Q96PC5 1412 aa18.12■□□□□ 0.49
PCDH19-202ENST00000373034 PRKRIP1Q9H875 184 aaPredicted RBP18.12■□□□□ 0.49
PCDH19-202ENST00000373034 GPATCH11Q8N954 259 aa18.12■□□□□ 0.49
PCDH19-202ENST00000373034 BCCIPQ9P287 314 aaKnown RBP eCLIP18.12■□□□□ 0.49
PCDH19-202ENST00000373034 CCDC175P0C221 793 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms