RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 BLMP54132 1417 aaPredicted RBP35.11■■■■□ 3.21
ATPAF1-202ENST00000371937 NRKQ7Z2Y5 1582 aa35.11■■■■□ 3.21
ATPAF1-202ENST00000371937 NCOA3Q9Y6Q9 1424 aa35.09■■■■□ 3.21
ATPAF1-202ENST00000371937 COG3Q96JB2 828 aa35.09■■■■□ 3.21
ATPAF1-202ENST00000371937 SSH2Q76I76 1423 aa35.07■■■■□ 3.21
ATPAF1-202ENST00000371937 C19orf44Q9H6X5 657 aa35.07■■■■□ 3.2
ATPAF1-202ENST00000371937 TTC21AQ8NDW8 1320 aa35.07■■■■□ 3.2
ATPAF1-202ENST00000371937 PHF8Q9UPP1 1060 aa35.04■■■■□ 3.2
ATPAF1-202ENST00000371937 STRCP1A6NGW2 1772 aa35.04■■■■□ 3.2
ATPAF1-202ENST00000371937 TMEM94Q12767 1356 aa35.02■■■■□ 3.2
ATPAF1-202ENST00000371937 AATKQ6ZMQ8 1374 aa35■■■■□ 3.19
ATPAF1-202ENST00000371937 ZRANB1Q9UGI0 708 aa34.99■■■■□ 3.19
ATPAF1-202ENST00000371937 ESCO1Q5FWF5 840 aa34.98■■■■□ 3.19
ATPAF1-202ENST00000371937 SHPRHQ149N8 1683 aa34.98■■■■□ 3.19
ATPAF1-202ENST00000371937 DCCP43146 1447 aa34.97■■■■□ 3.19
ATPAF1-202ENST00000371937 OVOS2A0A0J9YW53 1432 aa34.96■■■■□ 3.19
ATPAF1-202ENST00000371937 OVOS2Q6IE36 1432 aa34.96■■■■□ 3.19
ATPAF1-202ENST00000371937 POLKQ9UBT6 870 aa34.95■■■■□ 3.19
ATPAF1-202ENST00000371937 DMRT2Q9Y5R5 561 aa34.95■■■■□ 3.18
ATPAF1-202ENST00000371937 PNPLA6Q8IY17 1366 aa34.94■■■■□ 3.18
ATPAF1-202ENST00000371937 ATF3P18847 181 aa34.94■■■■□ 3.18
ATPAF1-202ENST00000371937 NUDCQ9Y266 331 aa34.93■■■■□ 3.18
ATPAF1-202ENST00000371937 USP31Q70CQ4 1352 aa34.91■■■■□ 3.18
ATPAF1-202ENST00000371937 MAP2P11137 1827 aaKnown RBP34.91■■■■□ 3.18
ATPAF1-202ENST00000371937 COL3A1P02461 1466 aaPredicted RBP34.91■■■■□ 3.18
ATPAF1-202ENST00000371937 SMG6Q86US8 1419 aaKnown RBP34.9■■■■□ 3.18
ATPAF1-202ENST00000371937 GTF3C3Q9Y5Q9 886 aa34.9■■■■□ 3.18
ATPAF1-202ENST00000371937 SENP3-EIF4A1A0A087X0R7 540 aa34.88■■■■□ 3.17
ATPAF1-202ENST00000371937 C1orf167Q5SNV9 1468 aa34.88■■■■□ 3.17
ATPAF1-202ENST00000371937 DIAPH1O60610 1272 aaKnown RBP34.87■■■■□ 3.17
ATPAF1-202ENST00000371937 FBLN1P23142 703 aa34.87■■■■□ 3.17
ATPAF1-202ENST00000371937 PSME1Q06323 249 aa34.87■■■■□ 3.17
ATPAF1-202ENST00000371937 CADPS2Q86UW7 1296 aa34.87■■■■□ 3.17
ATPAF1-202ENST00000371937 MSH6P52701 1360 aa34.87■■■■□ 3.17
ATPAF1-202ENST00000371937 PPM1GO15355 546 aaPredicted RBP34.86■■■■□ 3.17
ATPAF1-202ENST00000371937 ORAI2Q96SN7 254 aa34.86■■■■□ 3.17
ATPAF1-202ENST00000371937 PDE3BQ13370 1112 aa34.85■■■■□ 3.17
ATPAF1-202ENST00000371937 CCDC146Q8IYE0 955 aa34.85■■■■□ 3.17
ATPAF1-202ENST00000371937 CDK12Q9NYV4 1490 aaPredicted RBP34.85■■■■□ 3.17
ATPAF1-202ENST00000371937 PIK3C2AO00443 1686 aa34.84■■■■□ 3.17
ATPAF1-202ENST00000371937 SALL2Q9Y467 1007 aaPredicted RBP34.84■■■■□ 3.17
ATPAF1-202ENST00000371937 EMILIN1Q9Y6C2 1016 aa34.84■■■■□ 3.17
ATPAF1-202ENST00000371937 ZNF335Q9H4Z2 1342 aaPredicted RBP34.84■■■■□ 3.17
ATPAF1-202ENST00000371937 U2AF1L5P0DN76 240 aaPredicted RBP34.83■■■■□ 3.17
ATPAF1-202ENST00000371937 U2AF1Q01081 240 aaKnown RBP eCLIP34.83■■■■□ 3.17
ATPAF1-202ENST00000371937 NGEFQ8N5V2 710 aa34.83■■■■□ 3.17
ATPAF1-202ENST00000371937 KIF1AQ12756 1690 aa34.83■■■■□ 3.17
ATPAF1-202ENST00000371937 PAK3O75914 559 aaPredicted RBP34.83■■■■□ 3.17
ATPAF1-202ENST00000371937 MST1RQ04912 1400 aa34.82■■■■□ 3.17
ATPAF1-202ENST00000371937 LRRC7Q96NW7 1537 aa34.82■■■■□ 3.16
ATPAF1-202ENST00000371937 NLRP6P59044 892 aa34.81■■■■□ 3.16
ATPAF1-202ENST00000371937 ABTB2Q8N961 1025 aa34.81■■■■□ 3.16
ATPAF1-202ENST00000371937 RRS1Q15050 365 aaKnown RBP34.81■■■■□ 3.16
ATPAF1-202ENST00000371937 RUNDC1Q96C34 613 aa34.81■■■■□ 3.16
ATPAF1-202ENST00000371937 U2SURPO15042 1029 aaKnown RBP34.79■■■■□ 3.16
ATPAF1-202ENST00000371937 USP54Q70EL1 1684 aa34.78■■■■□ 3.16
ATPAF1-202ENST00000371937 APAF1O14727 1248 aa34.78■■■■□ 3.16
ATPAF1-202ENST00000371937 FOXO3O43524 673 aa34.78■■■■□ 3.16
ATPAF1-202ENST00000371937 XIRP1Q702N8 1843 aaKnown RBP34.77■■■■□ 3.16
ATPAF1-202ENST00000371937 PNNQ9H307 717 aaKnown RBP34.74■■■■□ 3.15
ATPAF1-202ENST00000371937 IL13P35225 146 aa34.69■■■■□ 3.14
ATPAF1-202ENST00000371937 NUTM2GQ5VZR2 741 aa34.69■■■■□ 3.14
ATPAF1-202ENST00000371937 KRT28Q7Z3Y7 464 aa34.69■■■■□ 3.14
ATPAF1-202ENST00000371937 ZNF521Q96K83 1311 aa34.68■■■■□ 3.14
ATPAF1-202ENST00000371937 SOX12O15370 315 aa34.68■■■■□ 3.14
ATPAF1-202ENST00000371937 MARF1Q9Y4F3 1742 aaKnown RBP34.67■■■■□ 3.14
ATPAF1-202ENST00000371937 FCHSD2O94868 740 aa34.67■■■■□ 3.14
ATPAF1-202ENST00000371937 TCP11L2Q8N4U5 519 aa34.67■■■■□ 3.14
ATPAF1-202ENST00000371937 MAP3K19Q56UN5 1328 aa34.66■■■■□ 3.14
ATPAF1-202ENST00000371937 NCBP3Q53F19 620 aaKnown RBP34.66■■■■□ 3.14
ATPAF1-202ENST00000371937 IQSEC2Q5JU85 1478 aa34.66■■■■□ 3.14
ATPAF1-202ENST00000371937 SBNO1A3KN83 1393 aa34.65■■■■□ 3.14
ATPAF1-202ENST00000371937 KIF24Q5T7B8 1368 aa34.64■■■■□ 3.14
ATPAF1-202ENST00000371937 XPCQ01831 940 aaPredicted RBP34.64■■■■□ 3.14
ATPAF1-202ENST00000371937 PLEKHF1Q96S99 279 aa34.64■■■■□ 3.14
ATPAF1-202ENST00000371937 FLT4P35916 1363 aa34.63■■■■□ 3.13
ATPAF1-202ENST00000371937 TRPM3Q9HCF6 1732 aaPredicted RBP34.63■■■■□ 3.13
ATPAF1-202ENST00000371937 NPHP3Q7Z494 1330 aa34.62■■■■□ 3.13
ATPAF1-202ENST00000371937 MAPK8IP3Q9UPT6 1336 aa34.62■■■■□ 3.13
ATPAF1-202ENST00000371937 GOLGA2Q08379 1002 aa34.62■■■■□ 3.13
ATPAF1-202ENST00000371937 SUPT16HQ9Y5B9 1047 aaKnown RBP34.62■■■■□ 3.13
ATPAF1-202ENST00000371937 PEAK1Q9H792 1746 aa34.61■■■■□ 3.13
ATPAF1-202ENST00000371937 KCNH5Q8NCM2 988 aa34.61■■■■□ 3.13
ATPAF1-202ENST00000371937 CDCA7LQ96GN5 454 aa34.61■■■■□ 3.13
ATPAF1-202ENST00000371937 AMPHP49418 695 aa34.6■■■■□ 3.13
ATPAF1-202ENST00000371937 NEFLP07196 543 aa34.59■■■■□ 3.13
ATPAF1-202ENST00000371937 NEFMP07197 916 aa34.58■■■■□ 3.13
ATPAF1-202ENST00000371937 EIF4A2Q14240 407 aaKnown RBP34.58■■■■□ 3.13
ATPAF1-202ENST00000371937 HSP90AB2PQ58FF8 381 aa34.58■■■■□ 3.13
ATPAF1-202ENST00000371937 CCDC27Q2M243 656 aa34.58■■■■□ 3.13
ATPAF1-202ENST00000371937 RSPH6AQ9H0K4 717 aa34.58■■■■□ 3.13
ATPAF1-202ENST00000371937 SLAIN2Q9P270 581 aa34.58■■■■□ 3.13
ATPAF1-202ENST00000371937 WWC1Q8IX03 1113 aa34.56■■■■□ 3.12
ATPAF1-202ENST00000371937 NEUROD2Q15784 382 aa34.55■■■■□ 3.12
ATPAF1-202ENST00000371937 LMOD2Q6P5Q4 547 aa34.55■■■■□ 3.12
ATPAF1-202ENST00000371937 PHF23Q9BUL5 403 aaPredicted RBP34.54■■■■□ 3.12
ATPAF1-202ENST00000371937 RRP7AQ9Y3A4 280 aaKnown RBP34.54■■■■□ 3.12
ATPAF1-202ENST00000371937 BRINP3Q76B58 766 aa34.53■■■■□ 3.12
ATPAF1-202ENST00000371937 PRKAR2BP31323 418 aa34.53■■■■□ 3.12
ATPAF1-202ENST00000371937 RTL1A6NKG5 1358 aa34.52■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms