RNA–Protein interactions for RNA: ENST00000369215.4

PRDM13-202, Transcript of PR/SET domain 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM13, Length 2,429 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM13-202ENST00000369215 U2AF1Q01081 240 aaKnown RBP eCLIP30.93■■■□□ 2.54
PRDM13-202ENST00000369215 PRR36Q9H6K5 1346 aa30.92■■■□□ 2.54
PRDM13-202ENST00000369215 TCP11L2Q8N4U5 519 aa30.92■■■□□ 2.54
PRDM13-202ENST00000369215 WWC1Q8IX03 1113 aa30.91■■■□□ 2.54
PRDM13-202ENST00000369215 AMOTL2Q9Y2J4 779 aa30.91■■■□□ 2.54
PRDM13-202ENST00000369215 NCKAP5LQ9HCH0 1330 aa30.91■■■□□ 2.54
PRDM13-202ENST00000369215 SPINK5Q9NQ38 1064 aaPredicted RBP30.9■■■□□ 2.54
PRDM13-202ENST00000369215 PTCH1Q13635 1447 aa30.9■■■□□ 2.54
PRDM13-202ENST00000369215 CCDC136Q96JN2 1154 aa30.89■■■□□ 2.54
PRDM13-202ENST00000369215 PNPLA6Q8IY17 1366 aa30.89■■■□□ 2.53
PRDM13-202ENST00000369215 NKTRP30414 1462 aaKnown RBP30.88■■■□□ 2.53
PRDM13-202ENST00000369215 TOPAZ1Q8N9V7 1692 aa30.88■■■□□ 2.53
PRDM13-202ENST00000369215 FANCIQ9NVI1 1328 aa30.88■■■□□ 2.53
PRDM13-202ENST00000369215 ADAMTSL3P82987 1691 aa30.87■■■□□ 2.53
PRDM13-202ENST00000369215 ZNF692Q9BU19 519 aaPredicted RBP30.87■■■□□ 2.53
PRDM13-202ENST00000369215 EXOC6Q8TAG9 804 aa30.86■■■□□ 2.53
PRDM13-202ENST00000369215 DMRT2Q9Y5R5 561 aa30.86■■■□□ 2.53
PRDM13-202ENST00000369215 NCBP3Q53F19 620 aaKnown RBP30.86■■■□□ 2.53
PRDM13-202ENST00000369215 PHF23Q9BUL5 403 aaPredicted RBP30.85■■■□□ 2.53
PRDM13-202ENST00000369215 RRP7AQ9Y3A4 280 aaKnown RBP30.85■■■□□ 2.53
PRDM13-202ENST00000369215 U2SURPO15042 1029 aaKnown RBP30.84■■■□□ 2.53
PRDM13-202ENST00000369215 PLIN1O60240 522 aa30.84■■■□□ 2.53
PRDM13-202ENST00000369215 NEUROD2Q15784 382 aa30.84■■■□□ 2.53
PRDM13-202ENST00000369215 NME9Q86XW9 330 aa30.84■■■□□ 2.53
PRDM13-202ENST00000369215 CCDC27Q2M243 656 aa30.84■■■□□ 2.53
PRDM13-202ENST00000369215 XRN1Q8IZH2 1706 aaKnown RBP30.84■■■□□ 2.53
PRDM13-202ENST00000369215 DIAPH1O60610 1272 aaKnown RBP30.83■■■□□ 2.53
PRDM13-202ENST00000369215 ZNF142P52746 1687 aaPredicted RBP30.82■■■□□ 2.53
PRDM13-202ENST00000369215 POLKQ9UBT6 870 aa30.82■■■□□ 2.52
PRDM13-202ENST00000369215 MAP2P11137 1827 aaKnown RBP30.8■■■□□ 2.52
PRDM13-202ENST00000369215 WDR63Q8IWG1 891 aa30.8■■■□□ 2.52
PRDM13-202ENST00000369215 PLEKHG3A1L390 1219 aa30.79■■■□□ 2.52
PRDM13-202ENST00000369215 PIK3R4Q99570 1358 aa30.78■■■□□ 2.52
PRDM13-202ENST00000369215 MSH5O43196 834 aa30.78■■■□□ 2.52
PRDM13-202ENST00000369215 COG3Q96JB2 828 aa30.78■■■□□ 2.52
PRDM13-202ENST00000369215 PLEKHF1Q96S99 279 aa30.78■■■□□ 2.52
PRDM13-202ENST00000369215 AATKQ6ZMQ8 1374 aa30.77■■■□□ 2.52
PRDM13-202ENST00000369215 NRKQ7Z2Y5 1582 aa30.77■■■□□ 2.52
PRDM13-202ENST00000369215 BCL11AQ9H165 835 aa30.77■■■□□ 2.52
PRDM13-202ENST00000369215 ZRANB1Q9UGI0 708 aa30.77■■■□□ 2.52
PRDM13-202ENST00000369215 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.76■■■□□ 2.52
PRDM13-202ENST00000369215 ACEP12821 1306 aa30.76■■■□□ 2.51
PRDM13-202ENST00000369215 FBLN1P23142 703 aa30.75■■■□□ 2.51
PRDM13-202ENST00000369215 NUTM2FA1L443 756 aa30.75■■■□□ 2.51
PRDM13-202ENST00000369215 PPM1GO15355 546 aaPredicted RBP30.74■■■□□ 2.51
PRDM13-202ENST00000369215 PNNQ9H307 717 aaKnown RBP30.74■■■□□ 2.51
PRDM13-202ENST00000369215 CRBNQ96SW2 442 aa30.73■■■□□ 2.51
PRDM13-202ENST00000369215 MAPK8IP3Q9UPT6 1336 aa30.73■■■□□ 2.51
PRDM13-202ENST00000369215 ANKLE2Q86XL3 938 aa30.73■■■□□ 2.51
PRDM13-202ENST00000369215 CDK12Q9NYV4 1490 aaPredicted RBP30.72■■■□□ 2.51
PRDM13-202ENST00000369215 TTC21BQ7Z4L5 1316 aa30.72■■■□□ 2.51
PRDM13-202ENST00000369215 USP6P35125 1406 aa30.71■■■□□ 2.51
PRDM13-202ENST00000369215 SETD1BQ9UPS6 1966 aaKnown RBP30.71■■■□□ 2.51
PRDM13-202ENST00000369215 EMILIN1Q9Y6C2 1016 aa30.71■■■□□ 2.51
PRDM13-202ENST00000369215 KCNA6P17658 529 aa30.69■■■□□ 2.5
PRDM13-202ENST00000369215 TMPOP42166 694 aaKnown RBP30.69■■■□□ 2.5
PRDM13-202ENST00000369215 C20orf194Q5TEA3 1177 aa30.69■■■□□ 2.5
PRDM13-202ENST00000369215 FCHSD2O94868 740 aa30.67■■■□□ 2.5
PRDM13-202ENST00000369215 LRRC7Q96NW7 1537 aa30.67■■■□□ 2.5
PRDM13-202ENST00000369215 MYH16Q9H6N6 1097 aa30.65■■■□□ 2.5
PRDM13-202ENST00000369215 OVOS2A0A0J9YW53 1432 aa30.64■■■□□ 2.5
PRDM13-202ENST00000369215 OVOS2Q6IE36 1432 aa30.64■■■□□ 2.5
PRDM13-202ENST00000369215 CHD2O14647 1828 aaKnown RBP30.64■■■□□ 2.5
PRDM13-202ENST00000369215 SSH2Q76I76 1423 aa30.63■■■□□ 2.49
PRDM13-202ENST00000369215 RGPD8O14715 1765 aaPredicted RBP30.63■■■□□ 2.49
PRDM13-202ENST00000369215 BCAR3O75815 825 aa30.63■■■□□ 2.49
PRDM13-202ENST00000369215 ANKARQ7Z5J8 1434 aa30.63■■■□□ 2.49
PRDM13-202ENST00000369215 RSPH6AQ9H0K4 717 aa30.63■■■□□ 2.49
PRDM13-202ENST00000369215 IL13P35225 146 aa30.62■■■□□ 2.49
PRDM13-202ENST00000369215 RRS1Q15050 365 aaKnown RBP30.62■■■□□ 2.49
PRDM13-202ENST00000369215 TRIM35Q9UPQ4 493 aa30.62■■■□□ 2.49
PRDM13-202ENST00000369215 PMFBP1Q8TBY8 1022 aa30.6■■■□□ 2.49
PRDM13-202ENST00000369215 NALCNQ8IZF0 1738 aa30.6■■■□□ 2.49
PRDM13-202ENST00000369215 FMN2Q9NZ56 1722 aa30.6■■■□□ 2.49
PRDM13-202ENST00000369215 PRKAR2BP31323 418 aa30.59■■■□□ 2.49
PRDM13-202ENST00000369215 TTC21AQ8NDW8 1320 aa30.59■■■□□ 2.49
PRDM13-202ENST00000369215 RIPK4P57078 832 aa30.58■■■□□ 2.49
PRDM13-202ENST00000369215 NEFMP07197 916 aa30.58■■■□□ 2.49
PRDM13-202ENST00000369215 NGDNQ8NEJ9 315 aaKnown RBP30.57■■■□□ 2.48
PRDM13-202ENST00000369215 IL16Q14005 1332 aa30.56■■■□□ 2.48
PRDM13-202ENST00000369215 USP31Q70CQ4 1352 aa30.55■■■□□ 2.48
PRDM13-202ENST00000369215 HMOX1P09601 288 aa30.54■■■□□ 2.48
PRDM13-202ENST00000369215 RARSP54136 660 aaKnown RBP30.54■■■□□ 2.48
PRDM13-202ENST00000369215 NPHP4O75161 1426 aaPredicted RBP30.52■■■□□ 2.48
PRDM13-202ENST00000369215 PDE3AQ14432 1141 aa30.49■■■□□ 2.47
PRDM13-202ENST00000369215 CT47B1P0C2W7 299 aaPredicted RBP30.49■■■□□ 2.47
PRDM13-202ENST00000369215 NFE2L2Q16236 605 aa30.49■■■□□ 2.47
PRDM13-202ENST00000369215 CANXP27824 592 aaKnown RBP30.48■■■□□ 2.47
PRDM13-202ENST00000369215 TSR2Q969E8 191 aaKnown RBP30.48■■■□□ 2.47
PRDM13-202ENST00000369215 PHACTR3Q96KR7 559 aa30.48■■■□□ 2.47
PRDM13-202ENST00000369215 PEAK1Q9H792 1746 aa30.46■■■□□ 2.47
PRDM13-202ENST00000369215 PIK3C2AO00443 1686 aa30.46■■■□□ 2.47
PRDM13-202ENST00000369215 EIF4A2Q14240 407 aaKnown RBP30.44■■■□□ 2.46
PRDM13-202ENST00000369215 EXOSC9Q06265 439 aaKnown RBP30.43■■■□□ 2.46
PRDM13-202ENST00000369215 FRAT1Q92837 279 aaPredicted RBP30.43■■■□□ 2.46
PRDM13-202ENST00000369215 ADGRL3Q9HAR2 1447 aa30.42■■■□□ 2.46
PRDM13-202ENST00000369215 ERICH6Q7L0X2 663 aa30.41■■■□□ 2.46
PRDM13-202ENST00000369215 KDM2BQ8NHM5 1336 aa30.39■■■□□ 2.46
PRDM13-202ENST00000369215 SOX12O15370 315 aa30.39■■■□□ 2.46
PRDM13-202ENST00000369215 BCL2L13Q9BXK5 485 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms