RNA–Protein interactions for RNA: ENST00000368516.1

C1orf43-203, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 2 BASIC

Gene C1orf43, Length 872 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-203ENST00000368516 CCDC9Q9Y3X0 531 aaKnown RBP23.14■■□□□ 1.29
C1orf43-203ENST00000368516 CENPJQ9HC77 1338 aaPredicted RBP23.13■■□□□ 1.29
C1orf43-203ENST00000368516 BRWD3Q6RI45 1802 aa23.13■■□□□ 1.29
C1orf43-203ENST00000368516 CCDC61Q9Y6R9 512 aa23.13■■□□□ 1.29
C1orf43-203ENST00000368516 POLR3AO14802 1390 aaPredicted RBP23.13■■□□□ 1.29
C1orf43-203ENST00000368516 CCDC125Q86Z20 511 aa23.12■■□□□ 1.29
C1orf43-203ENST00000368516 L3MBTL2Q969R5 705 aa23.12■■□□□ 1.29
C1orf43-203ENST00000368516 QRICH2Q9H0J4 1663 aa23.12■■□□□ 1.29
C1orf43-203ENST00000368516 BTG4Q9NY30 223 aa23.1■■□□□ 1.29
C1orf43-203ENST00000368516 PHRF1Q9P1Y6 1649 aaKnown RBP23.1■■□□□ 1.29
C1orf43-203ENST00000368516 ACEP12821 1306 aa23.09■■□□□ 1.29
C1orf43-203ENST00000368516 TRPM1Q7Z4N2 1603 aa23.09■■□□□ 1.29
C1orf43-203ENST00000368516 PLEKHG3A1L390 1219 aa23.09■■□□□ 1.29
C1orf43-203ENST00000368516 SEPT12Q8IYM1 358 aa23.09■■□□□ 1.29
C1orf43-203ENST00000368516 ONECUT3O60422 494 aaPredicted RBP23.08■■□□□ 1.29
C1orf43-203ENST00000368516 SIN3AQ96ST3 1273 aa23.08■■□□□ 1.29
C1orf43-203ENST00000368516 SRPK2P78362 688 aaKnown RBP23.07■■□□□ 1.28
C1orf43-203ENST00000368516 NBPF8Q3BBV2 869 aa23.07■■□□□ 1.28
C1orf43-203ENST00000368516 PRDM11Q9NQV5 511 aa23.07■■□□□ 1.28
C1orf43-203ENST00000368516 NEUROD1Q13562 356 aa23.05■■□□□ 1.28
C1orf43-203ENST00000368516 PPIP5K1Q6PFW1 1433 aa23.05■■□□□ 1.28
C1orf43-203ENST00000368516 BLMP54132 1417 aaPredicted RBP23.04■■□□□ 1.28
C1orf43-203ENST00000368516 KIAA0232Q92628 1395 aa23.02■■□□□ 1.28
C1orf43-203ENST00000368516 KRT27Q7Z3Y8 459 aa23.02■■□□□ 1.28
C1orf43-203ENST00000368516 CABP2Q9NPB3 220 aa23.02■■□□□ 1.28
C1orf43-203ENST00000368516 ROCK2O75116 1388 aaKnown RBP23.01■■□□□ 1.27
C1orf43-203ENST00000368516 A0A0G2JS52 829 aa23.01■■□□□ 1.27
C1orf43-203ENST00000368516 MYT1Q01538 1121 aa23.01■■□□□ 1.27
C1orf43-203ENST00000368516 FAM98CQ17RN3 349 aaKnown RBP23.01■■□□□ 1.27
C1orf43-203ENST00000368516 NUTM2GQ5VZR2 741 aa23.01■■□□□ 1.27
C1orf43-203ENST00000368516 BRD4O60885 1362 aaPredicted RBP23.01■■□□□ 1.27
C1orf43-203ENST00000368516 ABTB2Q8N961 1025 aa23■■□□□ 1.27
C1orf43-203ENST00000368516 NRKQ7Z2Y5 1582 aa23■■□□□ 1.27
C1orf43-203ENST00000368516 SPATA31A5Q5VU36 1347 aa23■■□□□ 1.27
C1orf43-203ENST00000368516 SPATA31A7Q8IWB4 1347 aa23■■□□□ 1.27
C1orf43-203ENST00000368516 EVC2Q86UK5 1308 aa22.98■■□□□ 1.27
C1orf43-203ENST00000368516 ZC3H6P61129 1189 aaKnown RBP22.97■■□□□ 1.27
C1orf43-203ENST00000368516 SF3B2Q13435 895 aaKnown RBP22.97■■□□□ 1.27
C1orf43-203ENST00000368516 CHRNA2Q15822 529 aa22.97■■□□□ 1.27
C1orf43-203ENST00000368516 ZRANB1Q9UGI0 708 aa22.97■■□□□ 1.27
C1orf43-203ENST00000368516 THSD7AQ9UPZ6 1657 aa22.97■■□□□ 1.27
C1orf43-203ENST00000368516 USP19O94966 1318 aa22.96■■□□□ 1.27
C1orf43-203ENST00000368516 NLRP13Q86W25 1043 aa22.95■■□□□ 1.26
C1orf43-203ENST00000368516 CABP1Q9NZU7 370 aa22.95■■□□□ 1.26
C1orf43-203ENST00000368516 USP6P35125 1406 aa22.94■■□□□ 1.26
C1orf43-203ENST00000368516 CPDO75976 1380 aa22.94■■□□□ 1.26
C1orf43-203ENST00000368516 SPATA31A1Q5TZJ5 1347 aa22.93■■□□□ 1.26
C1orf43-203ENST00000368516 STRN4Q9NRL3 753 aa22.92■■□□□ 1.26
C1orf43-203ENST00000368516 LMO7Q8WWI1 1683 aa22.92■■□□□ 1.26
C1orf43-203ENST00000368516 SRCAPQ6ZRS2 3230 aa22.91■■□□□ 1.26
C1orf43-203ENST00000368516 GCP02774 474 aa22.9■■□□□ 1.26
C1orf43-203ENST00000368516 SSH2Q76I76 1423 aa22.9■■□□□ 1.26
C1orf43-203ENST00000368516 EVA1CP58658 441 aa22.89■■□□□ 1.25
C1orf43-203ENST00000368516 DEFB132Q7Z7B7 95 aa22.89■■□□□ 1.25
C1orf43-203ENST00000368516 CAMTA1Q9Y6Y1 1673 aa22.89■■□□□ 1.25
C1orf43-203ENST00000368516 RGPD1P0DJD0 1748 aa22.88■■□□□ 1.25
C1orf43-203ENST00000368516 AKAP12Q02952 1782 aa22.88■■□□□ 1.25
C1orf43-203ENST00000368516 PIK3C2AO00443 1686 aa22.87■■□□□ 1.25
C1orf43-203ENST00000368516 TONSLQ96HA7 1378 aa22.87■■□□□ 1.25
C1orf43-203ENST00000368516 SBNO2Q9Y2G9 1366 aa22.87■■□□□ 1.25
C1orf43-203ENST00000368516 SLIT3O75094 1523 aa22.87■■□□□ 1.25
C1orf43-203ENST00000368516 NLRP6P59044 892 aa22.86■■□□□ 1.25
C1orf43-203ENST00000368516 BAG6P46379 1132 aa22.85■■□□□ 1.25
C1orf43-203ENST00000368516 ZNF692Q9BU19 519 aaPredicted RBP22.85■■□□□ 1.25
C1orf43-203ENST00000368516 BARGINQ6ZT62 677 aa22.84■■□□□ 1.25
C1orf43-203ENST00000368516 CARD11Q9BXL7 1154 aa22.84■■□□□ 1.25
C1orf43-203ENST00000368516 LARP1Q6PKG0 1096 aaKnown RBP22.83■■□□□ 1.25
C1orf43-203ENST00000368516 USP35Q9P2H5 1018 aa22.83■■□□□ 1.25
C1orf43-203ENST00000368516 COL5A2P05997 1499 aaPredicted RBP22.83■■□□□ 1.25
C1orf43-203ENST00000368516 FAM182BQ5T319 152 aa22.82■■□□□ 1.24
C1orf43-203ENST00000368516 TCP11L2Q8N4U5 519 aa22.81■■□□□ 1.24
C1orf43-203ENST00000368516 TNS1Q9HBL0 1735 aaKnown RBP22.81■■□□□ 1.24
C1orf43-203ENST00000368516 TTC21BQ7Z4L5 1316 aa22.81■■□□□ 1.24
C1orf43-203ENST00000368516 TTC21AQ8NDW8 1320 aa22.81■■□□□ 1.24
C1orf43-203ENST00000368516 AATKQ6ZMQ8 1374 aa22.8■■□□□ 1.24
C1orf43-203ENST00000368516 THRAP3Q9Y2W1 955 aaKnown RBP22.8■■□□□ 1.24
C1orf43-203ENST00000368516 CPSF1Q10570 1443 aaKnown RBP22.8■■□□□ 1.24
C1orf43-203ENST00000368516 ZBTB7CA1YPR0 619 aa22.79■■□□□ 1.24
C1orf43-203ENST00000368516 TRIM26Q12899 539 aaPredicted RBP22.79■■□□□ 1.24
C1orf43-203ENST00000368516 FAM196AQ6ZSG2 479 aa22.79■■□□□ 1.24
C1orf43-203ENST00000368516 MON2Q7Z3U7 1717 aa22.79■■□□□ 1.24
C1orf43-203ENST00000368516 KTN1Q86UP2 1357 aaKnown RBP22.78■■□□□ 1.24
C1orf43-203ENST00000368516 DISP2A7MBM2 1401 aa22.78■■□□□ 1.24
C1orf43-203ENST00000368516 CRB1P82279 1406 aa22.78■■□□□ 1.24
C1orf43-203ENST00000368516 PARP4Q9UKK3 1724 aaKnown RBP22.77■■□□□ 1.24
C1orf43-203ENST00000368516 COL18A1P39060 1754 aa22.77■■□□□ 1.24
C1orf43-203ENST00000368516 PDE3BQ13370 1112 aa22.77■■□□□ 1.24
C1orf43-203ENST00000368516 KCNH5Q8NCM2 988 aa22.76■■□□□ 1.23
C1orf43-203ENST00000368516 EN1Q05925 392 aaPredicted RBP22.74■■□□□ 1.23
C1orf43-203ENST00000368516 NFAT5O94916 1531 aa22.72■■□□□ 1.23
C1orf43-203ENST00000368516 USP54Q70EL1 1684 aa22.71■■□□□ 1.23
C1orf43-203ENST00000368516 TRIM37O94972 964 aa22.71■■□□□ 1.23
C1orf43-203ENST00000368516 ARHGEF25Q86VW2 580 aa22.71■■□□□ 1.23
C1orf43-203ENST00000368516 TOM1L2Q6ZVM7 507 aa22.7■■□□□ 1.22
C1orf43-203ENST00000368516 WDR17Q8IZU2 1322 aa22.7■■□□□ 1.22
C1orf43-203ENST00000368516 CD163L1Q9NR16 1453 aa22.7■■□□□ 1.22
C1orf43-203ENST00000368516 ABCC6O95255 1503 aa22.7■■□□□ 1.22
C1orf43-203ENST00000368516 RGPD5Q99666 1765 aa22.7■■□□□ 1.22
C1orf43-203ENST00000368516 WNK3Q9BYP7 1800 aa22.7■■□□□ 1.22
C1orf43-203ENST00000368516 SOX12O15370 315 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms