RNA–Protein interactions for RNA: ENST00000368408.3

EFNA3-201, Transcript of ephrin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3-201ENST00000368408 PRR36Q9H6K5 1346 aa34.48■■■■□ 3.11
EFNA3-201ENST00000368408 PNPLA6Q8IY17 1366 aa34.48■■■■□ 3.11
EFNA3-201ENST00000368408 DUSP27Q5VZP5 1158 aa34.47■■■■□ 3.11
EFNA3-201ENST00000368408 SLFN5Q08AF3 891 aa34.46■■■■□ 3.11
EFNA3-201ENST00000368408 ZNF692Q9BU19 519 aaPredicted RBP34.46■■■■□ 3.11
EFNA3-201ENST00000368408 ITSN1Q15811 1721 aa34.46■■■■□ 3.11
EFNA3-201ENST00000368408 SETD1BQ9UPS6 1966 aaKnown RBP34.44■■■■□ 3.1
EFNA3-201ENST00000368408 PLEKHG3A1L390 1219 aa34.41■■■■□ 3.1
EFNA3-201ENST00000368408 PHF23Q9BUL5 403 aaPredicted RBP34.4■■■■□ 3.1
EFNA3-201ENST00000368408 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.39■■■■□ 3.1
EFNA3-201ENST00000368408 E9PSI1 815 aa34.37■■■■□ 3.09
EFNA3-201ENST00000368408 AATKQ6ZMQ8 1374 aa34.37■■■■□ 3.09
EFNA3-201ENST00000368408 CCDC27Q2M243 656 aa34.36■■■■□ 3.09
EFNA3-201ENST00000368408 NCKAP5LQ9HCH0 1330 aa34.36■■■■□ 3.09
EFNA3-201ENST00000368408 NRKQ7Z2Y5 1582 aa34.35■■■■□ 3.09
EFNA3-201ENST00000368408 ANKLE2Q86XL3 938 aa34.34■■■■□ 3.09
EFNA3-201ENST00000368408 WWC1Q8IX03 1113 aa34.34■■■■□ 3.09
EFNA3-201ENST00000368408 TCP11L2Q8N4U5 519 aa34.34■■■■□ 3.09
EFNA3-201ENST00000368408 U2AF1L5P0DN76 240 aaPredicted RBP34.33■■■■□ 3.09
EFNA3-201ENST00000368408 U2AF1Q01081 240 aaKnown RBP eCLIP34.33■■■■□ 3.09
EFNA3-201ENST00000368408 POLKQ9UBT6 870 aa34.31■■■■□ 3.08
EFNA3-201ENST00000368408 NME9Q86XW9 330 aa34.3■■■■□ 3.08
EFNA3-201ENST00000368408 NKTRP30414 1462 aaKnown RBP34.3■■■■□ 3.08
EFNA3-201ENST00000368408 DIAPH1O60610 1272 aaKnown RBP34.29■■■■□ 3.08
EFNA3-201ENST00000368408 SPINK5Q9NQ38 1064 aaPredicted RBP34.28■■■■□ 3.08
EFNA3-201ENST00000368408 LMTK3Q96Q04 1460 aa34.28■■■■□ 3.08
EFNA3-201ENST00000368408 WDR63Q8IWG1 891 aa34.28■■■■□ 3.08
EFNA3-201ENST00000368408 PLEKHF1Q96S99 279 aa34.27■■■■□ 3.08
EFNA3-201ENST00000368408 CHD2O14647 1828 aaKnown RBP34.27■■■■□ 3.08
EFNA3-201ENST00000368408 MAP2P11137 1827 aaKnown RBP34.27■■■■□ 3.08
EFNA3-201ENST00000368408 ACEP12821 1306 aa34.27■■■■□ 3.08
EFNA3-201ENST00000368408 USP6P35125 1406 aa34.26■■■■□ 3.08
EFNA3-201ENST00000368408 ANKARQ7Z5J8 1434 aa34.26■■■■□ 3.08
EFNA3-201ENST00000368408 COG3Q96JB2 828 aa34.26■■■■□ 3.07
EFNA3-201ENST00000368408 SSH2Q76I76 1423 aa34.26■■■■□ 3.07
EFNA3-201ENST00000368408 CDK12Q9NYV4 1490 aaPredicted RBP34.26■■■■□ 3.07
EFNA3-201ENST00000368408 B4GALNT3Q6L9W6 998 aa34.25■■■■□ 3.07
EFNA3-201ENST00000368408 TTC21BQ7Z4L5 1316 aa34.24■■■■□ 3.07
EFNA3-201ENST00000368408 KCNA6P17658 529 aa34.24■■■■□ 3.07
EFNA3-201ENST00000368408 TSHZ2Q9NRE2 1034 aa34.24■■■■□ 3.07
EFNA3-201ENST00000368408 DMRT2Q9Y5R5 561 aa34.23■■■■□ 3.07
EFNA3-201ENST00000368408 PNNQ9H307 717 aaKnown RBP34.23■■■■□ 3.07
EFNA3-201ENST00000368408 U2SURPO15042 1029 aaKnown RBP34.21■■■■□ 3.07
EFNA3-201ENST00000368408 OVOS2A0A0J9YW53 1432 aa34.2■■■■□ 3.07
EFNA3-201ENST00000368408 OVOS2Q6IE36 1432 aa34.2■■■■□ 3.07
EFNA3-201ENST00000368408 FMN2Q9NZ56 1722 aa34.19■■■■□ 3.06
EFNA3-201ENST00000368408 ZRANB1Q9UGI0 708 aa34.19■■■■□ 3.06
EFNA3-201ENST00000368408 HSPA2P54652 639 aa34.18■■■■□ 3.06
EFNA3-201ENST00000368408 FCHSD2O94868 740 aa34.17■■■■□ 3.06
EFNA3-201ENST00000368408 RRP7AQ9Y3A4 280 aaKnown RBP34.17■■■■□ 3.06
EFNA3-201ENST00000368408 NALCNQ8IZF0 1738 aa34.17■■■■□ 3.06
EFNA3-201ENST00000368408 TTC21AQ8NDW8 1320 aa34.16■■■■□ 3.06
EFNA3-201ENST00000368408 EXOC6Q8TAG9 804 aa34.15■■■■□ 3.06
EFNA3-201ENST00000368408 NPHP4O75161 1426 aaPredicted RBP34.14■■■■□ 3.06
EFNA3-201ENST00000368408 CCDC136Q96JN2 1154 aa34.13■■■■□ 3.05
EFNA3-201ENST00000368408 EMILIN1Q9Y6C2 1016 aa34.13■■■■□ 3.05
EFNA3-201ENST00000368408 USP31Q70CQ4 1352 aa34.13■■■■□ 3.05
EFNA3-201ENST00000368408 FBLN1P23142 703 aa34.13■■■■□ 3.05
EFNA3-201ENST00000368408 NEUROD2Q15784 382 aa34.13■■■■□ 3.05
EFNA3-201ENST00000368408 TMPOP42166 694 aaKnown RBP34.12■■■■□ 3.05
EFNA3-201ENST00000368408 GOLGA6L2Q8N9W4 650 aaPredicted RBP34.12■■■■□ 3.05
EFNA3-201ENST00000368408 MAPK8IP3Q9UPT6 1336 aa34.12■■■■□ 3.05
EFNA3-201ENST00000368408 RGPD8O14715 1765 aaPredicted RBP34.12■■■■□ 3.05
EFNA3-201ENST00000368408 NUTM2FA1L443 756 aa34.11■■■■□ 3.05
EFNA3-201ENST00000368408 IL13P35225 146 aa34.11■■■■□ 3.05
EFNA3-201ENST00000368408 LRRC7Q96NW7 1537 aa34.1■■■■□ 3.05
EFNA3-201ENST00000368408 PLIN1O60240 522 aa34.1■■■■□ 3.05
EFNA3-201ENST00000368408 RSPH6AQ9H0K4 717 aa34.08■■■■□ 3.05
EFNA3-201ENST00000368408 PPM1GO15355 546 aaPredicted RBP34.06■■■■□ 3.04
EFNA3-201ENST00000368408 IL16Q14005 1332 aa34.06■■■■□ 3.04
EFNA3-201ENST00000368408 MYH16Q9H6N6 1097 aa34.06■■■■□ 3.04
EFNA3-201ENST00000368408 TRIM35Q9UPQ4 493 aa34.05■■■■□ 3.04
EFNA3-201ENST00000368408 NWD1Q149M9 1564 aa34.03■■■■□ 3.04
EFNA3-201ENST00000368408 NGDNQ8NEJ9 315 aaKnown RBP34.03■■■■□ 3.04
EFNA3-201ENST00000368408 PMFBP1Q8TBY8 1022 aa34.03■■■■□ 3.04
EFNA3-201ENST00000368408 CRBNQ96SW2 442 aa34.02■■■■□ 3.04
EFNA3-201ENST00000368408 ADGRL3Q9HAR2 1447 aa34.02■■■■□ 3.04
EFNA3-201ENST00000368408 USP54Q70EL1 1684 aa34.01■■■■□ 3.04
EFNA3-201ENST00000368408 RRS1Q15050 365 aaKnown RBP34.01■■■■□ 3.04
EFNA3-201ENST00000368408 PIK3C2AO00443 1686 aa33.98■■■■□ 3.03
EFNA3-201ENST00000368408 PRKAR2BP31323 418 aa33.98■■■■□ 3.03
EFNA3-201ENST00000368408 CT47B1P0C2W7 299 aaPredicted RBP33.97■■■■□ 3.03
EFNA3-201ENST00000368408 RIPK4P57078 832 aa33.97■■■■□ 3.03
EFNA3-201ENST00000368408 C20orf194Q5TEA3 1177 aa33.97■■■■□ 3.03
EFNA3-201ENST00000368408 NEFMP07197 916 aa33.95■■■■□ 3.02
EFNA3-201ENST00000368408 PEAK1Q9H792 1746 aa33.95■■■■□ 3.02
EFNA3-201ENST00000368408 BCAR3O75815 825 aa33.93■■■■□ 3.02
EFNA3-201ENST00000368408 NFE2L2Q16236 605 aa33.93■■■■□ 3.02
EFNA3-201ENST00000368408 RARSP54136 660 aaKnown RBP33.91■■■■□ 3.02
EFNA3-201ENST00000368408 PDE3AQ14432 1141 aa33.9■■■■□ 3.02
EFNA3-201ENST00000368408 RGPD1P0DJD0 1748 aa33.89■■■■□ 3.02
EFNA3-201ENST00000368408 FANCIQ9NVI1 1328 aa33.89■■■■□ 3.02
EFNA3-201ENST00000368408 HMOX1P09601 288 aa33.88■■■■□ 3.01
EFNA3-201ENST00000368408 EIF4A2Q14240 407 aaKnown RBP33.88■■■■□ 3.01
EFNA3-201ENST00000368408 MARF1Q9Y4F3 1742 aaKnown RBP33.88■■■■□ 3.01
EFNA3-201ENST00000368408 PHACTR3Q96KR7 559 aa33.88■■■■□ 3.01
EFNA3-201ENST00000368408 PHF8Q9UPP1 1060 aa33.88■■■■□ 3.01
EFNA3-201ENST00000368408 STRCQ7RTU9 1775 aa33.86■■■■□ 3.01
EFNA3-201ENST00000368408 SBNO1A3KN83 1393 aa33.86■■■■□ 3.01
EFNA3-201ENST00000368408 KIF24Q5T7B8 1368 aa33.86■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms