RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 CHD1O14646 1710 aa8.68□□□□□ -1.02
ECHDC1-204ENST00000368292 URB2Q14146 1524 aaKnown RBP8.67□□□□□ -1.02
ECHDC1-204ENST00000368292 ATP1B4Q9UN42 357 aaPredicted RBP8.67□□□□□ -1.02
ECHDC1-204ENST00000368292 FCF1Q9Y324 198 aaKnown RBP8.67□□□□□ -1.02
ECHDC1-204ENST00000368292 RSF1Q96T23 1441 aaPredicted RBP8.66□□□□□ -1.02
ECHDC1-204ENST00000368292 PER1O15534 1290 aaPredicted RBP8.65□□□□□ -1.02
ECHDC1-204ENST00000368292 RFC5P40937 340 aa8.65□□□□□ -1.02
ECHDC1-204ENST00000368292 LYPD8Q6UX82 237 aa8.65□□□□□ -1.02
ECHDC1-204ENST00000368292 FANCD2Q9BXW9 1451 aa8.64□□□□□ -1.03
ECHDC1-204ENST00000368292 CTDSPL2Q05D32 466 aa8.64□□□□□ -1.03
ECHDC1-204ENST00000368292 PTPRNQ16849 979 aa8.64□□□□□ -1.03
ECHDC1-204ENST00000368292 LIAT1Q6ZQX7 453 aa8.64□□□□□ -1.03
ECHDC1-204ENST00000368292 RGS20O76081 388 aa8.63□□□□□ -1.03
ECHDC1-204ENST00000368292 NUDT12Q9BQG2 462 aa8.63□□□□□ -1.03
ECHDC1-204ENST00000368292 TSC1Q92574 1164 aa8.62□□□□□ -1.03
ECHDC1-204ENST00000368292 PRKD2Q9BZL6 878 aa8.62□□□□□ -1.03
ECHDC1-204ENST00000368292 EVA1BQ9NVM1 165 aa8.62□□□□□ -1.03
ECHDC1-204ENST00000368292 CCNYL3P0C7X3 344 aa8.61□□□□□ -1.03
ECHDC1-204ENST00000368292 PTCRAQ6ISU1 281 aaPredicted RBP8.61□□□□□ -1.03
ECHDC1-204ENST00000368292 CCDC24Q8N4L8 307 aa8.61□□□□□ -1.03
ECHDC1-204ENST00000368292 F12P00748 615 aaPredicted RBP8.6□□□□□ -1.03
ECHDC1-204ENST00000368292 SLC19A1P41440 591 aa8.6□□□□□ -1.03
ECHDC1-204ENST00000368292 RANGAP1P46060 587 aaPredicted RBP8.6□□□□□ -1.03
ECHDC1-204ENST00000368292 HELBQ8NG08 1087 aaPredicted RBP8.6□□□□□ -1.03
ECHDC1-204ENST00000368292 AP1G2O75843 785 aa8.59□□□□□ -1.03
ECHDC1-204ENST00000368292 LRRN4Q8WUT4 740 aa8.59□□□□□ -1.03
ECHDC1-204ENST00000368292 V9GY48 417 aaPredicted RBP8.59□□□□□ -1.03
ECHDC1-204ENST00000368292 EIF4G3O43432 1585 aaKnown RBP8.59□□□□□ -1.03
ECHDC1-204ENST00000368292 RPIAP49247 311 aa8.58□□□□□ -1.04
ECHDC1-204ENST00000368292 KCNH2Q12809 1159 aa8.58□□□□□ -1.04
ECHDC1-204ENST00000368292 TMEM259Q4ZIN3 620 aa8.58□□□□□ -1.04
ECHDC1-204ENST00000368292 SPRYD7Q5W111 196 aa8.57□□□□□ -1.04
ECHDC1-204ENST00000368292 MAP10Q9P2G4 905 aa8.57□□□□□ -1.04
ECHDC1-204ENST00000368292 LMTK3Q96Q04 1460 aa8.57□□□□□ -1.04
ECHDC1-204ENST00000368292 ERCC6L2Q5T890 1561 aa8.56□□□□□ -1.04
ECHDC1-204ENST00000368292 CLASP1Q7Z460 1538 aa8.56□□□□□ -1.04
ECHDC1-204ENST00000368292 USP17L8P0C7I0 530 aa8.56□□□□□ -1.04
ECHDC1-204ENST00000368292 KIF13AQ9H1H9 1805 aa8.55□□□□□ -1.04
ECHDC1-204ENST00000368292 CTHP32929 405 aa8.55□□□□□ -1.04
ECHDC1-204ENST00000368292 UNC93B1Q9H1C4 597 aa8.55□□□□□ -1.04
ECHDC1-204ENST00000368292 HMX1Q9NP08 348 aaPredicted RBP8.55□□□□□ -1.04
ECHDC1-204ENST00000368292 HECW2Q9P2P5 1572 aa8.55□□□□□ -1.04
ECHDC1-204ENST00000368292 IFT140Q96RY7 1462 aa8.54□□□□□ -1.04
ECHDC1-204ENST00000368292 ZBTB24O43167 697 aaPredicted RBP8.54□□□□□ -1.04
ECHDC1-204ENST00000368292 TRIM32Q13049 653 aa8.54□□□□□ -1.04
ECHDC1-204ENST00000368292 ZNF598Q86UK7 904 aaKnown RBP8.54□□□□□ -1.04
ECHDC1-204ENST00000368292 BANK1Q8NDB2 785 aa8.54□□□□□ -1.04
ECHDC1-204ENST00000368292 CD2BP2O95400 341 aaKnown RBP8.53□□□□□ -1.04
ECHDC1-204ENST00000368292 HOMEZQ8IX15 550 aa8.53□□□□□ -1.04
ECHDC1-204ENST00000368292 EPS8L1Q8TE68 723 aa8.53□□□□□ -1.04
ECHDC1-204ENST00000368292 FBXO41Q8TF61 875 aa8.53□□□□□ -1.04
ECHDC1-204ENST00000368292 SKOR1P84550 965 aa8.52□□□□□ -1.05
ECHDC1-204ENST00000368292 NR6A1Q15406 480 aa8.52□□□□□ -1.05
ECHDC1-204ENST00000368292 ILDR2Q71H61 639 aa8.52□□□□□ -1.05
ECHDC1-204ENST00000368292 SNRKQ9NRH2 765 aa8.52□□□□□ -1.05
ECHDC1-204ENST00000368292 SOCS7O14512 581 aa8.51□□□□□ -1.05
ECHDC1-204ENST00000368292 ZNF697Q5TEC3 545 aa8.51□□□□□ -1.05
ECHDC1-204ENST00000368292 TRIM67Q6ZTA4 783 aa8.51□□□□□ -1.05
ECHDC1-204ENST00000368292 BAP1Q92560 729 aa8.51□□□□□ -1.05
ECHDC1-204ENST00000368292 GJD4Q96KN9 370 aaPredicted RBP8.51□□□□□ -1.05
ECHDC1-204ENST00000368292 TRIM34Q9BYJ4 488 aa8.51□□□□□ -1.05
ECHDC1-204ENST00000368292 MROH2BQ7Z745 1585 aa8.51□□□□□ -1.05
ECHDC1-204ENST00000368292 MTMR14Q8NCE2 650 aa8.5□□□□□ -1.05
ECHDC1-204ENST00000368292 CFTRP13569 1480 aa8.5□□□□□ -1.05
ECHDC1-204ENST00000368292 SH3BP2P78314 561 aa8.49□□□□□ -1.05
ECHDC1-204ENST00000368292 PKD2L1Q9P0L9 805 aa8.49□□□□□ -1.05
ECHDC1-204ENST00000368292 GDF9O60383 454 aa8.48□□□□□ -1.05
ECHDC1-204ENST00000368292 WNT7BP56706 349 aa8.48□□□□□ -1.05
ECHDC1-204ENST00000368292 LINC01559Q495D7 138 aa8.48□□□□□ -1.05
ECHDC1-204ENST00000368292 AQRO60306 1485 aaKnown RBP eCLIP8.47□□□□□ -1.05
ECHDC1-204ENST00000368292 GAPVD1Q14C86 1478 aa8.47□□□□□ -1.05
ECHDC1-204ENST00000368292 SUPT5HO00267 1087 aaKnown RBP8.47□□□□□ -1.05
ECHDC1-204ENST00000368292 ZNF511Q8NB15 262 aa8.47□□□□□ -1.05
ECHDC1-204ENST00000368292 WNT7AO00755 349 aa8.46□□□□□ -1.06
ECHDC1-204ENST00000368292 FKBPLQ9UIM3 349 aa8.46□□□□□ -1.06
ECHDC1-204ENST00000368292 RC3H1Q5TC82 1133 aaKnown RBP8.45□□□□□ -1.06
ECHDC1-204ENST00000368292 ARMC2Q8NEN0 867 aa8.45□□□□□ -1.06
ECHDC1-204ENST00000368292 FOXJ1Q92949 421 aa8.45□□□□□ -1.06
ECHDC1-204ENST00000368292 GPR37L1O60883 481 aa8.44□□□□□ -1.06
ECHDC1-204ENST00000368292 PRR20EP86478 221 aa8.44□□□□□ -1.06
ECHDC1-204ENST00000368292 PRR20CP86479 221 aa8.44□□□□□ -1.06
ECHDC1-204ENST00000368292 PRR20DP86480 221 aa8.44□□□□□ -1.06
ECHDC1-204ENST00000368292 PRR20BP86481 221 aa8.44□□□□□ -1.06
ECHDC1-204ENST00000368292 PRR20AP86496 221 aa8.44□□□□□ -1.06
ECHDC1-204ENST00000368292 FOXC1Q12948 553 aa8.44□□□□□ -1.06
ECHDC1-204ENST00000368292 MCM6Q14566 821 aa8.44□□□□□ -1.06
ECHDC1-204ENST00000368292 C4orf48Q5BLP8 95 aa8.44□□□□□ -1.06
ECHDC1-204ENST00000368292 MRGPRX2Q96LB1 330 aa8.44□□□□□ -1.06
ECHDC1-204ENST00000368292 TARBP1Q13395 1621 aaKnown RBP8.43□□□□□ -1.06
ECHDC1-204ENST00000368292 TNFRSF10AO00220 468 aa8.43□□□□□ -1.06
ECHDC1-204ENST00000368292 SH3BP5LQ7L8J4 393 aa8.43□□□□□ -1.06
ECHDC1-204ENST00000368292 SH3RF1Q7Z6J0 888 aa8.43□□□□□ -1.06
ECHDC1-204ENST00000368292 SIAH2O43255 324 aa8.42□□□□□ -1.06
ECHDC1-204ENST00000368292 NBPF14Q5TI25 921 aa8.42□□□□□ -1.06
ECHDC1-204ENST00000368292 PDXDC2PQ6P474 469 aa8.42□□□□□ -1.06
ECHDC1-204ENST00000368292 GPKOWQ92917 476 aaPredicted RBP eCLIP8.42□□□□□ -1.06
ECHDC1-204ENST00000368292 OCSTAMPQ9BR26 566 aa8.42□□□□□ -1.06
ECHDC1-204ENST00000368292 ZMYND15Q9H091 742 aa8.42□□□□□ -1.06
ECHDC1-204ENST00000368292 PDZRN3Q9UPQ7 1066 aa8.42□□□□□ -1.06
ECHDC1-204ENST00000368292 TOPBP1Q92547 1522 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms