RNA–Protein interactions for RNA: ENST00000368273.8

PMF1-201, Transcript of polyamine modulated factor 1, humanhuman

TSL 2 BASIC

Gene PMF1, Length 884 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-201ENST00000368273 TESK2Q96S53 571 aa18.32■□□□□ 0.52
PMF1-201ENST00000368273 ATAD2Q6PL18 1390 aa18.31■□□□□ 0.52
PMF1-201ENST00000368273 PAK3O75914 559 aaPredicted RBP18.31■□□□□ 0.52
PMF1-201ENST00000368273 C8orf37Q96NL8 207 aa18.31■□□□□ 0.52
PMF1-201ENST00000368273 SLC24A1O60721 1099 aa18.3■□□□□ 0.52
PMF1-201ENST00000368273 ZNF772Q68DY9 489 aaPredicted RBP18.3■□□□□ 0.52
PMF1-201ENST00000368273 POTEAQ6S8J7 498 aa18.3■□□□□ 0.52
PMF1-201ENST00000368273 AFF2P51816 1311 aa18.29■□□□□ 0.52
PMF1-201ENST00000368273 NGLY1Q96IV0 654 aa18.29■□□□□ 0.52
PMF1-201ENST00000368273 CABLES1Q8TDN4 633 aa18.28■□□□□ 0.52
PMF1-201ENST00000368273 PUS7Q96PZ0 661 aaKnown RBP18.28■□□□□ 0.52
PMF1-201ENST00000368273 MARF1Q9Y4F3 1742 aaKnown RBP18.28■□□□□ 0.52
PMF1-201ENST00000368273 BRD4O60885 1362 aaPredicted RBP18.27■□□□□ 0.51
PMF1-201ENST00000368273 ABCA3Q99758 1704 aa18.26■□□□□ 0.51
PMF1-201ENST00000368273 PLEKHG5O94827 1062 aa18.26■□□□□ 0.51
PMF1-201ENST00000368273 HAP1P54257 671 aaPredicted RBP18.26■□□□□ 0.51
PMF1-201ENST00000368273 USP6P35125 1406 aa18.25■□□□□ 0.51
PMF1-201ENST00000368273 MIER1Q8N108 512 aa18.25■□□□□ 0.51
PMF1-201ENST00000368273 FNBP4Q8N3X1 1017 aaPredicted RBP18.25■□□□□ 0.51
PMF1-201ENST00000368273 ZNF692Q9BU19 519 aaPredicted RBP18.25■□□□□ 0.51
PMF1-201ENST00000368273 CPSF1Q10570 1443 aaKnown RBP18.23■□□□□ 0.51
PMF1-201ENST00000368273 AKAP12Q02952 1782 aa18.23■□□□□ 0.51
PMF1-201ENST00000368273 ABTB2Q8N961 1025 aa18.23■□□□□ 0.51
PMF1-201ENST00000368273 CRYBG1Q9Y4K1 1723 aa18.23■□□□□ 0.51
PMF1-201ENST00000368273 SSH2Q76I76 1423 aa18.23■□□□□ 0.51
PMF1-201ENST00000368273 TMF1P82094 1093 aa18.22■□□□□ 0.51
PMF1-201ENST00000368273 USP21Q9UK80 565 aa18.22■□□□□ 0.51
PMF1-201ENST00000368273 NUTM2GQ5VZR2 741 aa18.21■□□□□ 0.51
PMF1-201ENST00000368273 TMC1Q8TDI8 760 aa18.21■□□□□ 0.51
PMF1-201ENST00000368273 SLC12A5Q9H2X9 1139 aa18.21■□□□□ 0.51
PMF1-201ENST00000368273 QTRT2Q9H974 415 aaKnown RBP18.2■□□□□ 0.5
PMF1-201ENST00000368273 CD163L1Q9NR16 1453 aa18.2■□□□□ 0.5
PMF1-201ENST00000368273 KTN1Q86UP2 1357 aaKnown RBP18.19■□□□□ 0.5
PMF1-201ENST00000368273 BCL9LQ86UU0 1499 aa18.19■□□□□ 0.5
PMF1-201ENST00000368273 TTC21BQ7Z4L5 1316 aa18.19■□□□□ 0.5
PMF1-201ENST00000368273 SLIT2O94813 1529 aa18.18■□□□□ 0.5
PMF1-201ENST00000368273 NINLQ9Y2I6 1382 aa18.18■□□□□ 0.5
PMF1-201ENST00000368273 FAM83GA6ND36 823 aa18.18■□□□□ 0.5
PMF1-201ENST00000368273 RXRBP28702 533 aa18.18■□□□□ 0.5
PMF1-201ENST00000368273 CDCA8Q53HL2 280 aa18.18■□□□□ 0.5
PMF1-201ENST00000368273 NLRP13Q86W25 1043 aa18.18■□□□□ 0.5
PMF1-201ENST00000368273 POLR3GLQ9BT43 218 aa18.18■□□□□ 0.5
PMF1-201ENST00000368273 PHRF1Q9P1Y6 1649 aaKnown RBP18.18■□□□□ 0.5
PMF1-201ENST00000368273 USP19O94966 1318 aa18.18■□□□□ 0.5
PMF1-201ENST00000368273 MON2Q7Z3U7 1717 aa18.18■□□□□ 0.5
PMF1-201ENST00000368273 HDGFL2Q7Z4V5 671 aaPredicted RBP18.17■□□□□ 0.5
PMF1-201ENST00000368273 TERF2IPQ9NYB0 399 aa18.17■□□□□ 0.5
PMF1-201ENST00000368273 TRPC5Q9UL62 973 aaPredicted RBP18.17■□□□□ 0.5
PMF1-201ENST00000368273 TTC21AQ8NDW8 1320 aa18.17■□□□□ 0.5
PMF1-201ENST00000368273 NRKQ7Z2Y5 1582 aa18.17■□□□□ 0.5
PMF1-201ENST00000368273 ATRNO75882 1429 aa18.16■□□□□ 0.5
PMF1-201ENST00000368273 SOCS7O14512 581 aa18.16■□□□□ 0.5
PMF1-201ENST00000368273 UNC5CLQ8IV45 518 aa18.16■□□□□ 0.5
PMF1-201ENST00000368273 PIK3C2AO00443 1686 aa18.15■□□□□ 0.5
PMF1-201ENST00000368273 PLCH1Q4KWH8 1693 aa18.15■□□□□ 0.5
PMF1-201ENST00000368273 NLRP6P59044 892 aa18.15■□□□□ 0.5
PMF1-201ENST00000368273 RBM6P78332 1123 aaKnown RBP18.15■□□□□ 0.5
PMF1-201ENST00000368273 A0A1W2PP64 1363 aa18.15■□□□□ 0.5
PMF1-201ENST00000368273 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.15■□□□□ 0.5
PMF1-201ENST00000368273 NWD2Q9ULI1 1742 aa18.15■□□□□ 0.5
PMF1-201ENST00000368273 COL14A1Q05707 1796 aaKnown RBP18.14■□□□□ 0.49
PMF1-201ENST00000368273 ANP32CO43423 234 aa18.13■□□□□ 0.49
PMF1-201ENST00000368273 PRDM11Q9NQV5 511 aa18.13■□□□□ 0.49
PMF1-201ENST00000368273 KIAA0232Q92628 1395 aa18.13■□□□□ 0.49
PMF1-201ENST00000368273 EDC4Q6P2E9 1401 aaKnown RBP18.13■□□□□ 0.49
PMF1-201ENST00000368273 CDK12Q9NYV4 1490 aaPredicted RBP18.13■□□□□ 0.49
PMF1-201ENST00000368273 GCP02774 474 aa18.12■□□□□ 0.49
PMF1-201ENST00000368273 ZC3H6P61129 1189 aaKnown RBP18.12■□□□□ 0.49
PMF1-201ENST00000368273 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.12■□□□□ 0.49
PMF1-201ENST00000368273 BTG4Q9NY30 223 aa18.11■□□□□ 0.49
PMF1-201ENST00000368273 CPDO75976 1380 aa18.11■□□□□ 0.49
PMF1-201ENST00000368273 SLIT3O75094 1523 aa18.11■□□□□ 0.49
PMF1-201ENST00000368273 ANKRD36BQ8N2N9 1353 aa18.1■□□□□ 0.49
PMF1-201ENST00000368273 USP31Q70CQ4 1352 aa18.09■□□□□ 0.49
PMF1-201ENST00000368273 CHRNA2Q15822 529 aa18.09■□□□□ 0.49
PMF1-201ENST00000368273 VPS72Q15906 364 aa18.09■□□□□ 0.49
PMF1-201ENST00000368273 GJD4Q96KN9 370 aaPredicted RBP18.09■□□□□ 0.49
PMF1-201ENST00000368273 NRAPQ86VF7 1730 aa18.09■□□□□ 0.49
PMF1-201ENST00000368273 NME9Q86XW9 330 aa18.08■□□□□ 0.48
PMF1-201ENST00000368273 USP54Q70EL1 1684 aa18.07■□□□□ 0.48
PMF1-201ENST00000368273 ZRANB1Q9UGI0 708 aa18.07■□□□□ 0.48
PMF1-201ENST00000368273 RGS12O14924 1447 aa18.06■□□□□ 0.48
PMF1-201ENST00000368273 MYOM1P52179 1685 aa18.06■□□□□ 0.48
PMF1-201ENST00000368273 KCNH5Q8NCM2 988 aa18.06■□□□□ 0.48
PMF1-201ENST00000368273 GLI3P10071 1580 aa18.05■□□□□ 0.48
PMF1-201ENST00000368273 LMO7Q8WWI1 1683 aa18.04■□□□□ 0.48
PMF1-201ENST00000368273 CCER2I3L3R5 266 aa18.04■□□□□ 0.48
PMF1-201ENST00000368273 CCDC9Q9Y3X0 531 aaKnown RBP18.04■□□□□ 0.48
PMF1-201ENST00000368273 NFAT5O94916 1531 aa18.03■□□□□ 0.48
PMF1-201ENST00000368273 CAMTA1Q9Y6Y1 1673 aa18.03■□□□□ 0.48
PMF1-201ENST00000368273 AATKQ6ZMQ8 1374 aa18.03■□□□□ 0.48
PMF1-201ENST00000368273 ZBTB7CA1YPR0 619 aa18.02■□□□□ 0.48
PMF1-201ENST00000368273 SOX12O15370 315 aa18.02■□□□□ 0.48
PMF1-201ENST00000368273 ARHGEF25Q86VW2 580 aa18.02■□□□□ 0.48
PMF1-201ENST00000368273 PANK3Q9H999 370 aa18.02■□□□□ 0.48
PMF1-201ENST00000368273 OVOS2A0A0J9YW53 1432 aa18.01■□□□□ 0.47
PMF1-201ENST00000368273 OVOS2Q6IE36 1432 aa18.01■□□□□ 0.47
PMF1-201ENST00000368273 PRKRIP1Q9H875 184 aaPredicted RBP18.01■□□□□ 0.47
PMF1-201ENST00000368273 STRN4Q9NRL3 753 aa18.01■□□□□ 0.47
PMF1-201ENST00000368273 SPATA31A5Q5VU36 1347 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms