RNA–Protein interactions for RNA: ENST00000368258.7

CCT3-203, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-203ENST00000368258 KIF16BQ96L93 1317 aa15.37■□□□□ 0.05
CCT3-203ENST00000368258 DDX19BQ9UMR2 479 aa15.37■□□□□ 0.05
CCT3-203ENST00000368258 TNNQ9UQP3 1299 aa15.37■□□□□ 0.05
CCT3-203ENST00000368258 IFT172Q9UG01 1749 aa15.36■□□□□ 0.05
CCT3-203ENST00000368258 INO80Q9ULG1 1556 aaPredicted RBP15.36■□□□□ 0.05
CCT3-203ENST00000368258 ARHGEF40Q8TER5 1519 aa15.36■□□□□ 0.05
CCT3-203ENST00000368258 KLHL40Q2TBA0 621 aa15.35■□□□□ 0.05
CCT3-203ENST00000368258 ANP32BQ92688 251 aaKnown RBP15.35■□□□□ 0.05
CCT3-203ENST00000368258 SETBP1Q9Y6X0 1596 aa15.35■□□□□ 0.05
CCT3-203ENST00000368258 ZC3H13Q5T200 1668 aaKnown RBP15.35■□□□□ 0.05
CCT3-203ENST00000368258 RICTORQ6R327 1708 aa15.34■□□□□ 0.05
CCT3-203ENST00000368258 VWDEQ8N2E2 1590 aa15.34■□□□□ 0.05
CCT3-203ENST00000368258 GOLGA6L22H0YM25 854 aa15.34■□□□□ 0.05
CCT3-203ENST00000368258 NASPP49321 788 aaPredicted RBP15.34■□□□□ 0.05
CCT3-203ENST00000368258 FTSJ3Q8IY81 847 aaKnown RBP15.34■□□□□ 0.05
CCT3-203ENST00000368258 NRXN1Q9ULB1 1477 aa15.34■□□□□ 0.05
CCT3-203ENST00000368258 HSP90AB1P08238 724 aaKnown RBP15.33■□□□□ 0.05
CCT3-203ENST00000368258 MTERF4Q7Z6M4 381 aaKnown RBP15.33■□□□□ 0.05
CCT3-203ENST00000368258 ZNF445P59923 1031 aa15.33■□□□□ 0.04
CCT3-203ENST00000368258 ABCC1P33527 1531 aa15.32■□□□□ 0.04
CCT3-203ENST00000368258 ZNF500O60304 480 aaPredicted RBP15.32■□□□□ 0.04
CCT3-203ENST00000368258 BMP2KLQ5H9B9 411 aa15.32■□□□□ 0.04
CCT3-203ENST00000368258 NSD3Q9BZ95 1437 aa15.31■□□□□ 0.04
CCT3-203ENST00000368258 MSNP26038 577 aaKnown RBP15.31■□□□□ 0.04
CCT3-203ENST00000368258 NUCB1Q02818 461 aa15.31■□□□□ 0.04
CCT3-203ENST00000368258 ABCC11Q96J66 1382 aa15.31■□□□□ 0.04
CCT3-203ENST00000368258 NOS1P29475 1434 aa15.31■□□□□ 0.04
CCT3-203ENST00000368258 K7ELQ4 463 aaPredicted RBP15.31■□□□□ 0.04
CCT3-203ENST00000368258 RIPK4P57078 832 aa15.31■□□□□ 0.04
CCT3-203ENST00000368258 KIF2CQ99661 725 aa15.31■□□□□ 0.04
CCT3-203ENST00000368258 NSD2O96028 1365 aa15.3■□□□□ 0.04
CCT3-203ENST00000368258 MCM5P33992 734 aa15.29■□□□□ 0.04
CCT3-203ENST00000368258 MORC1Q86VD1 984 aa15.29■□□□□ 0.04
CCT3-203ENST00000368258 PDLIM2Q96JY6 352 aa15.29■□□□□ 0.04
CCT3-203ENST00000368258 CFAP53Q96M91 514 aa15.29■□□□□ 0.04
CCT3-203ENST00000368258 BCL2L13Q9BXK5 485 aa15.29■□□□□ 0.04
CCT3-203ENST00000368258 NOL7Q9UMY1 257 aaKnown RBP15.29■□□□□ 0.04
CCT3-203ENST00000368258 PTPRMP28827 1452 aa15.29■□□□□ 0.04
CCT3-203ENST00000368258 TRIM27P14373 513 aa15.29■□□□□ 0.04
CCT3-203ENST00000368258 ATF7IPQ6VMQ6 1270 aa15.29■□□□□ 0.04
CCT3-203ENST00000368258 ZBTB40Q9NUA8 1239 aa15.29■□□□□ 0.04
CCT3-203ENST00000368258 IL16Q14005 1332 aa15.29■□□□□ 0.04
CCT3-203ENST00000368258 FANCAO15360 1455 aa15.28■□□□□ 0.04
CCT3-203ENST00000368258 MED14O60244 1454 aa15.28■□□□□ 0.04
CCT3-203ENST00000368258 PRDM4Q9UKN5 801 aa15.28■□□□□ 0.04
CCT3-203ENST00000368258 RRP7AQ9Y3A4 280 aaKnown RBP15.28■□□□□ 0.04
CCT3-203ENST00000368258 KIF1BO60333 1816 aa15.27■□□□□ 0.04
CCT3-203ENST00000368258 PLCH2O75038 1416 aa15.27■□□□□ 0.04
CCT3-203ENST00000368258 NEUROD2Q15784 382 aa15.26■□□□□ 0.03
CCT3-203ENST00000368258 CSPP1Q1MSJ5 1256 aa15.26■□□□□ 0.03
CCT3-203ENST00000368258 ZFYVE16Q7Z3T8 1539 aa15.26■□□□□ 0.03
CCT3-203ENST00000368258 YEATS2Q9ULM3 1422 aa15.25■□□□□ 0.03
CCT3-203ENST00000368258 TRAPPC8Q9Y2L5 1435 aa15.25■□□□□ 0.03
CCT3-203ENST00000368258 BAG4O95429 457 aaKnown RBP15.25■□□□□ 0.03
CCT3-203ENST00000368258 SMAP1Q8IYB5 467 aaPredicted RBP15.25■□□□□ 0.03
CCT3-203ENST00000368258 PUS7Q96PZ0 661 aaKnown RBP15.25■□□□□ 0.03
CCT3-203ENST00000368258 SMC4Q9NTJ3 1288 aa15.25■□□□□ 0.03
CCT3-203ENST00000368258 QRICH2Q9H0J4 1663 aa15.25■□□□□ 0.03
CCT3-203ENST00000368258 POGZQ7Z3K3 1410 aa15.25■□□□□ 0.03
CCT3-203ENST00000368258 DYNC1I1O14576 645 aa15.25■□□□□ 0.03
CCT3-203ENST00000368258 CHD1LQ86WJ1 897 aa15.25■□□□□ 0.03
CCT3-203ENST00000368258 CFAP44Q96MT7 982 aa15.25■□□□□ 0.03
CCT3-203ENST00000368258 RAPGEF3O95398 923 aa15.24■□□□□ 0.03
CCT3-203ENST00000368258 ITPRIPQ8IWB1 547 aa15.24■□□□□ 0.03
CCT3-203ENST00000368258 DDX49Q9Y6V7 483 aaKnown RBP15.24■□□□□ 0.03
CCT3-203ENST00000368258 IPO8O15397 1037 aaKnown RBP15.23■□□□□ 0.03
CCT3-203ENST00000368258 SSFA2P28290 1259 aa15.23■□□□□ 0.03
CCT3-203ENST00000368258 BRPF1P55201 1214 aaPredicted RBP15.23■□□□□ 0.03
CCT3-203ENST00000368258 NUCB2P80303 420 aa15.23■□□□□ 0.03
CCT3-203ENST00000368258 GCC1Q96CN9 775 aa15.23■□□□□ 0.03
CCT3-203ENST00000368258 CHMP4BQ9H444 224 aaKnown RBP15.23■□□□□ 0.03
CCT3-203ENST00000368258 CYP2E1P05181 493 aaPredicted RBP15.23■□□□□ 0.03
CCT3-203ENST00000368258 SSH1Q8WYL5 1049 aa15.23■□□□□ 0.03
CCT3-203ENST00000368258 FBXO41Q8TF61 875 aa15.22■□□□□ 0.03
CCT3-203ENST00000368258 ZKSCAN5Q9Y2L8 839 aa15.22■□□□□ 0.03
CCT3-203ENST00000368258 RIMS1Q86UR5 1692 aaKnown RBP15.21■□□□□ 0.03
CCT3-203ENST00000368258 MTHFSP49914 203 aa15.21■□□□□ 0.03
CCT3-203ENST00000368258 ALDH1L2Q3SY69 923 aa15.21■□□□□ 0.03
CCT3-203ENST00000368258 CFAP70Q5T0N1 1121 aa15.21■□□□□ 0.03
CCT3-203ENST00000368258 ZNF428Q96B54 188 aa15.21■□□□□ 0.03
CCT3-203ENST00000368258 CD2BP2O95400 341 aaKnown RBP15.2■□□□□ 0.02
CCT3-203ENST00000368258 EXOSC9Q06265 439 aaKnown RBP15.2■□□□□ 0.02
CCT3-203ENST00000368258 TMEM57Q8N5G2 664 aa15.2■□□□□ 0.02
CCT3-203ENST00000368258 GAS2L2Q8NHY3 880 aa15.2■□□□□ 0.02
CCT3-203ENST00000368258 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.2■□□□□ 0.02
CCT3-203ENST00000368258 PIK3R4Q99570 1358 aa15.2■□□□□ 0.02
CCT3-203ENST00000368258 COL3A1P02461 1466 aaPredicted RBP15.19■□□□□ 0.02
CCT3-203ENST00000368258 MROH2AA6NES4 1674 aa15.19■□□□□ 0.02
CCT3-203ENST00000368258 RABEP1Q15276 862 aa15.19■□□□□ 0.02
CCT3-203ENST00000368258 ZSCAN23Q3MJ62 389 aa15.19■□□□□ 0.02
CCT3-203ENST00000368258 NOB1Q9ULX3 412 aaKnown RBP15.19■□□□□ 0.02
CCT3-203ENST00000368258 PPIP5K1Q6PFW1 1433 aa15.19■□□□□ 0.02
CCT3-203ENST00000368258 ADGRB3O60242 1522 aa15.19■□□□□ 0.02
CCT3-203ENST00000368258 EFCAB2Q5VUJ9 269 aa15.18■□□□□ 0.02
CCT3-203ENST00000368258 CWC22Q9HCG8 908 aaKnown RBP15.18■□□□□ 0.02
CCT3-203ENST00000368258 LMBRD1Q9NUN5 540 aa15.18■□□□□ 0.02
CCT3-203ENST00000368258 R3HCC1Q9Y3T6 440 aaKnown RBP15.18■□□□□ 0.02
CCT3-203ENST00000368258 ADGRB1O14514 1584 aa15.18■□□□□ 0.02
CCT3-203ENST00000368258 ADGRF5Q8IZF2 1346 aa15.18■□□□□ 0.02
CCT3-203ENST00000368258 UQCRHLA0A096LP55 91 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms