RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 CDK5RAP3Q96JB5 506 aa8.49□□□□□ -1.05
SPTA1-201ENST00000368147 MPHOSPH8Q99549 860 aa8.49□□□□□ -1.05
SPTA1-201ENST00000368147 MIA2Q96PC5 1412 aa8.49□□□□□ -1.05
SPTA1-201ENST00000368147 BCCIPQ9P287 314 aaKnown RBP eCLIP8.49□□□□□ -1.05
SPTA1-201ENST00000368147 KRT18P05783 430 aaKnown RBP8.49□□□□□ -1.05
SPTA1-201ENST00000368147 FKBP4Q02790 459 aaKnown RBP eCLIP8.49□□□□□ -1.05
SPTA1-201ENST00000368147 BRMS1Q9HCU9 246 aa8.49□□□□□ -1.05
SPTA1-201ENST00000368147 NESP48681 1621 aa8.48□□□□□ -1.05
SPTA1-201ENST00000368147 CC2D2AQ9P2K1 1620 aa8.48□□□□□ -1.05
SPTA1-201ENST00000368147 FSD1Q9BTV5 496 aa8.48□□□□□ -1.05
SPTA1-201ENST00000368147 CEBPZQ03701 1054 aaKnown RBP8.48□□□□□ -1.05
SPTA1-201ENST00000368147 SAFBQ15424 915 aaKnown RBP eCLIP8.48□□□□□ -1.05
SPTA1-201ENST00000368147 MPRIPQ6WCQ1 1025 aa8.48□□□□□ -1.05
SPTA1-201ENST00000368147 C16orf71Q8IYS4 520 aaPredicted RBP8.48□□□□□ -1.05
SPTA1-201ENST00000368147 ANKIB1Q9P2G1 1089 aa8.48□□□□□ -1.05
SPTA1-201ENST00000368147 PTCD1O75127 700 aaKnown RBP8.48□□□□□ -1.05
SPTA1-201ENST00000368147 USP8P40818 1118 aa8.48□□□□□ -1.05
SPTA1-201ENST00000368147 CFAP65Q6ZU64 1925 aaKnown RBP8.48□□□□□ -1.05
SPTA1-201ENST00000368147 USHBP1Q8N6Y0 703 aa8.48□□□□□ -1.05
SPTA1-201ENST00000368147 PRG4Q92954 1404 aaPredicted RBP8.48□□□□□ -1.05
SPTA1-201ENST00000368147 USP5P45974 858 aa8.48□□□□□ -1.05
SPTA1-201ENST00000368147 LNPKQ9C0E8 428 aa8.48□□□□□ -1.05
SPTA1-201ENST00000368147 SLC3A2P08195 630 aaKnown RBP8.47□□□□□ -1.05
SPTA1-201ENST00000368147 IPO7O95373 1038 aaKnown RBP8.47□□□□□ -1.05
SPTA1-201ENST00000368147 BTBD11A6QL63 1104 aa8.47□□□□□ -1.05
SPTA1-201ENST00000368147 TMEM87AQ8NBN3 555 aa8.47□□□□□ -1.05
SPTA1-201ENST00000368147 SPG7Q9UQ90 795 aa8.47□□□□□ -1.05
SPTA1-201ENST00000368147 E9PSI1 815 aa8.47□□□□□ -1.05
SPTA1-201ENST00000368147 BRPF1P55201 1214 aaPredicted RBP8.47□□□□□ -1.05
SPTA1-201ENST00000368147 HMGN5P82970 282 aaKnown RBP8.47□□□□□ -1.05
SPTA1-201ENST00000368147 PDILTQ8N807 584 aa8.47□□□□□ -1.05
SPTA1-201ENST00000368147 NUP133Q8WUM0 1156 aa8.47□□□□□ -1.05
SPTA1-201ENST00000368147 CCER2I3L3R5 266 aa8.47□□□□□ -1.05
SPTA1-201ENST00000368147 STK3Q13188 491 aa8.47□□□□□ -1.05
SPTA1-201ENST00000368147 HSP90B2PQ58FF3 399 aa8.47□□□□□ -1.05
SPTA1-201ENST00000368147 RNF20Q5VTR2 975 aa8.47□□□□□ -1.05
SPTA1-201ENST00000368147 MIS18AQ9NYP9 233 aa8.47□□□□□ -1.05
SPTA1-201ENST00000368147 CLEC11AQ9Y240 323 aa8.47□□□□□ -1.05
SPTA1-201ENST00000368147 ATAD2BQ9ULI0 1458 aa8.47□□□□□ -1.05
SPTA1-201ENST00000368147 CEBPAP49715 358 aaPredicted RBP8.47□□□□□ -1.05
SPTA1-201ENST00000368147 GNL3LQ9NVN8 582 aaKnown RBP8.47□□□□□ -1.05
SPTA1-201ENST00000368147 ARGLU1Q9NWB6 273 aaPredicted RBP8.47□□□□□ -1.05
SPTA1-201ENST00000368147 EXOC6Q8TAG9 804 aa8.46□□□□□ -1.05
SPTA1-201ENST00000368147 RUNDC1Q96C34 613 aa8.46□□□□□ -1.06
SPTA1-201ENST00000368147 CCDC30Q5VVM6 783 aa8.46□□□□□ -1.06
SPTA1-201ENST00000368147 TTC16Q8NEE8 873 aa8.46□□□□□ -1.06
SPTA1-201ENST00000368147 ERC2O15083 957 aa8.46□□□□□ -1.06
SPTA1-201ENST00000368147 SULT6B1Q6IMI4 303 aa8.46□□□□□ -1.06
SPTA1-201ENST00000368147 TRMT1LQ7Z2T5 733 aaKnown RBP8.46□□□□□ -1.06
SPTA1-201ENST00000368147 ANKRD20A12PQ8NF67 263 aa8.46□□□□□ -1.06
SPTA1-201ENST00000368147 PANK1Q8TE04 598 aa8.46□□□□□ -1.06
SPTA1-201ENST00000368147 HOOK1Q9UJC3 728 aaKnown RBP8.46□□□□□ -1.06
SPTA1-201ENST00000368147 CCDC158Q5M9N0 1113 aa8.45□□□□□ -1.06
SPTA1-201ENST00000368147 CFAP70Q5T0N1 1121 aa8.45□□□□□ -1.06
SPTA1-201ENST00000368147 ZNF622Q969S3 477 aaKnown RBP eCLIP8.45□□□□□ -1.069e-11■■■□□ 15.2
SPTA1-201ENST00000368147 ZNF530Q6P9A1 599 aaPredicted RBP8.45□□□□□ -1.06
SPTA1-201ENST00000368147 CABP1Q9NZU7 370 aa8.45□□□□□ -1.06
SPTA1-201ENST00000368147 SURF6O75683 361 aaKnown RBP8.45□□□□□ -1.06
SPTA1-201ENST00000368147 CCDC57Q2TAC2 916 aa8.45□□□□□ -1.06
SPTA1-201ENST00000368147 DZIP1LQ8IYY4 767 aaKnown RBP8.45□□□□□ -1.06
SPTA1-201ENST00000368147 CCDC97Q96F63 343 aaPredicted RBP8.45□□□□□ -1.06
SPTA1-201ENST00000368147 PODXL2Q9NZ53 605 aa8.45□□□□□ -1.06
SPTA1-201ENST00000368147 SMC3Q9UQE7 1217 aa8.45□□□□□ -1.06
SPTA1-201ENST00000368147 MNS1Q8NEH6 495 aa8.45□□□□□ -1.06
SPTA1-201ENST00000368147 SCLT1Q96NL6 688 aa8.45□□□□□ -1.06
SPTA1-201ENST00000368147 RBM19Q9Y4C8 960 aaKnown RBP8.45□□□□□ -1.06
SPTA1-201ENST00000368147 ZNF76P36508 570 aa8.44□□□□□ -1.06
SPTA1-201ENST00000368147 C8orf37Q96NL8 207 aa8.44□□□□□ -1.06
SPTA1-201ENST00000368147 ACSBG1Q96GR2 724 aa8.44□□□□□ -1.06
SPTA1-201ENST00000368147 TAF3Q5VWG9 929 aa8.44□□□□□ -1.06
SPTA1-201ENST00000368147 ANKRD18AQ8IVF6 992 aa8.44□□□□□ -1.06
SPTA1-201ENST00000368147 RAI14Q9P0K7 980 aa8.44□□□□□ -1.06
SPTA1-201ENST00000368147 DDX49Q9Y6V7 483 aaKnown RBP8.44□□□□□ -1.06
SPTA1-201ENST00000368147 CCDC173Q0VFZ6 552 aa8.44□□□□□ -1.06
SPTA1-201ENST00000368147 SCAPERQ9BY12 1400 aa8.44□□□□□ -1.06
SPTA1-201ENST00000368147 CNTROBQ8N137 903 aa8.44□□□□□ -1.06
SPTA1-201ENST00000368147 CFAP57Q96MR6 1250 aa8.44□□□□□ -1.06
SPTA1-201ENST00000368147 ROCK1Q13464 1354 aa8.44□□□□□ -1.06
SPTA1-201ENST00000368147 XBP1P17861 261 aa8.44□□□□□ -1.06
SPTA1-201ENST00000368147 ERCC4Q92889 916 aaPredicted RBP8.44□□□□□ -1.06
SPTA1-201ENST00000368147 UBAP1LF5GYI3 381 aa8.43□□□□□ -1.06
SPTA1-201ENST00000368147 PRKAR2BP31323 418 aa8.43□□□□□ -1.06
SPTA1-201ENST00000368147 SART3Q15020 963 aaKnown RBP8.43□□□□□ -1.06
SPTA1-201ENST00000368147 NINLQ9Y2I6 1382 aa8.43□□□□□ -1.06
SPTA1-201ENST00000368147 GNAI1P63096 354 aa8.43□□□□□ -1.06
SPTA1-201ENST00000368147 HOMER1Q86YM7 354 aa8.43□□□□□ -1.06
SPTA1-201ENST00000368147 RPGRQ92834 1020 aaKnown RBP8.43□□□□□ -1.06
SPTA1-201ENST00000368147 ABCF2Q9UG63 623 aa8.43□□□□□ -1.06
SPTA1-201ENST00000368147 OFD1O75665 1012 aa8.43□□□□□ -1.06
SPTA1-201ENST00000368147 HSP90AB3PQ58FF7 597 aa8.43□□□□□ -1.06
SPTA1-201ENST00000368147 FEZ1Q99689 392 aa8.43□□□□□ -1.06
SPTA1-201ENST00000368147 TMOD3Q9NYL9 352 aa8.43□□□□□ -1.06
SPTA1-201ENST00000368147 CLASRPQ8N2M8 674 aaKnown RBP8.43□□□□□ -1.06
SPTA1-201ENST00000368147 SPATA24Q86W54 205 aa8.42□□□□□ -1.06
SPTA1-201ENST00000368147 DDX19BQ9UMR2 479 aa8.42□□□□□ -1.06
SPTA1-201ENST00000368147 CCDC69A6NI79 296 aa8.42□□□□□ -1.06
SPTA1-201ENST00000368147 PLCD4Q9BRC7 762 aa8.42□□□□□ -1.06
SPTA1-201ENST00000368147 LRP2BPQ9P2M1 347 aa8.42□□□□□ -1.06
SPTA1-201ENST00000368147 PHLDB1Q86UU1 1377 aa8.42□□□□□ -1.06
SPTA1-201ENST00000368147 WAPLQ7Z5K2 1190 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms