RNA–Protein interactions for RNA: ENST00000364447.1

RNU4-59P-201, Transcript of RNA, U4 small nuclear 59, pseudogene, humanhuman

BASIC

Gene RNU4-59P, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-59P-201ENST00000364447 FAM83GA6ND36 823 aa11.88□□□□□ -0.51
RNU4-59P-201ENST00000364447 MYT1Q01538 1121 aa11.88□□□□□ -0.51
RNU4-59P-201ENST00000364447 SEPT12Q8IYM1 358 aa11.88□□□□□ -0.51
RNU4-59P-201ENST00000364447 ZRANB1Q9UGI0 708 aa11.88□□□□□ -0.51
RNU4-59P-201ENST00000364447 TOPAZ1Q8N9V7 1692 aa11.87□□□□□ -0.51
RNU4-59P-201ENST00000364447 PHRF1Q9P1Y6 1649 aaKnown RBP11.86□□□□□ -0.51
RNU4-59P-201ENST00000364447 SF3B2Q13435 895 aaKnown RBP11.86□□□□□ -0.51
RNU4-59P-201ENST00000364447 NUDT16Q96DE0 195 aaKnown RBP11.86□□□□□ -0.51
RNU4-59P-201ENST00000364447 BTG4Q9NY30 223 aa11.86□□□□□ -0.51
RNU4-59P-201ENST00000364447 KRT27Q7Z3Y8 459 aa11.85□□□□□ -0.51
RNU4-59P-201ENST00000364447 CDK19Q9BWU1 502 aa11.84□□□□□ -0.51
RNU4-59P-201ENST00000364447 PRDM11Q9NQV5 511 aa11.84□□□□□ -0.51
RNU4-59P-201ENST00000364447 QRICH2Q9H0J4 1663 aa11.84□□□□□ -0.51
RNU4-59P-201ENST00000364447 ONECUT3O60422 494 aaPredicted RBP11.83□□□□□ -0.52
RNU4-59P-201ENST00000364447 FAM98CQ17RN3 349 aaKnown RBP11.83□□□□□ -0.52
RNU4-59P-201ENST00000364447 CCDC61Q9Y6R9 512 aa11.82□□□□□ -0.52
RNU4-59P-201ENST00000364447 ACEP12821 1306 aa11.82□□□□□ -0.52
RNU4-59P-201ENST00000364447 POLR3AO14802 1390 aaPredicted RBP11.81□□□□□ -0.52
RNU4-59P-201ENST00000364447 KIAA0232Q92628 1395 aa11.81□□□□□ -0.52
RNU4-59P-201ENST00000364447 RGPD1P0DJD0 1748 aa11.81□□□□□ -0.52
RNU4-59P-201ENST00000364447 NBPF1Q3BBV0 1214 aa11.81□□□□□ -0.52
RNU4-59P-201ENST00000364447 DEFB132Q7Z7B7 95 aa11.81□□□□□ -0.52
RNU4-59P-201ENST00000364447 SPATA31A5Q5VU36 1347 aa11.81□□□□□ -0.52
RNU4-59P-201ENST00000364447 SPATA31A7Q8IWB4 1347 aa11.81□□□□□ -0.52
RNU4-59P-201ENST00000364447 CENPJQ9HC77 1338 aaPredicted RBP11.81□□□□□ -0.52
RNU4-59P-201ENST00000364447 THSD7AQ9UPZ6 1657 aa11.81□□□□□ -0.52
RNU4-59P-201ENST00000364447 NRKQ7Z2Y5 1582 aa11.8□□□□□ -0.52
RNU4-59P-201ENST00000364447 SRPK2P78362 688 aaKnown RBP11.8□□□□□ -0.52
RNU4-59P-201ENST00000364447 NUTM2GQ5VZR2 741 aa11.8□□□□□ -0.52
RNU4-59P-201ENST00000364447 PPIP5K1Q6PFW1 1433 aa11.79□□□□□ -0.52
RNU4-59P-201ENST00000364447 PLEKHG3A1L390 1219 aa11.79□□□□□ -0.52
RNU4-59P-201ENST00000364447 ZC3H6P61129 1189 aaKnown RBP11.79□□□□□ -0.52
RNU4-59P-201ENST00000364447 CHRNA2Q15822 529 aa11.79□□□□□ -0.52
RNU4-59P-201ENST00000364447 NBPF8Q3BBV2 869 aa11.79□□□□□ -0.52
RNU4-59P-201ENST00000364447 STRN4Q9NRL3 753 aa11.79□□□□□ -0.52
RNU4-59P-201ENST00000364447 TRPM1Q7Z4N2 1603 aa11.78□□□□□ -0.52
RNU4-59P-201ENST00000364447 BAG6P46379 1132 aa11.78□□□□□ -0.52
RNU4-59P-201ENST00000364447 ABTB2Q8N961 1025 aa11.78□□□□□ -0.52
RNU4-59P-201ENST00000364447 EVA1CP58658 441 aa11.76□□□□□ -0.53
RNU4-59P-201ENST00000364447 L3MBTL2Q969R5 705 aa11.76□□□□□ -0.53
RNU4-59P-201ENST00000364447 CABP2Q9NPB3 220 aa11.76□□□□□ -0.53
RNU4-59P-201ENST00000364447 TNS1Q9HBL0 1735 aaKnown RBP11.76□□□□□ -0.53
RNU4-59P-201ENST00000364447 SPATA31A1Q5TZJ5 1347 aa11.76□□□□□ -0.53
RNU4-59P-201ENST00000364447 LMO7Q8WWI1 1683 aa11.75□□□□□ -0.53
RNU4-59P-201ENST00000364447 FAM182BQ5T319 152 aa11.75□□□□□ -0.53
RNU4-59P-201ENST00000364447 NLRP13Q86W25 1043 aa11.75□□□□□ -0.53
RNU4-59P-201ENST00000364447 USP35Q9P2H5 1018 aa11.75□□□□□ -0.53
RNU4-59P-201ENST00000364447 USP19O94966 1318 aa11.75□□□□□ -0.53
RNU4-59P-201ENST00000364447 BRD4O60885 1362 aaPredicted RBP11.75□□□□□ -0.53
RNU4-59P-201ENST00000364447 SSH2Q76I76 1423 aa11.75□□□□□ -0.53
RNU4-59P-201ENST00000364447 CPDO75976 1380 aa11.74□□□□□ -0.53
RNU4-59P-201ENST00000364447 USP6P35125 1406 aa11.74□□□□□ -0.53
RNU4-59P-201ENST00000364447 CAMTA1Q9Y6Y1 1673 aa11.74□□□□□ -0.53
RNU4-59P-201ENST00000364447 ROCK2O75116 1388 aaKnown RBP11.73□□□□□ -0.53
RNU4-59P-201ENST00000364447 LRP5O75197 1615 aa11.73□□□□□ -0.53
RNU4-59P-201ENST00000364447 NEUROD1Q13562 356 aa11.73□□□□□ -0.53
RNU4-59P-201ENST00000364447 EVC2Q86UK5 1308 aa11.73□□□□□ -0.53
RNU4-59P-201ENST00000364447 PIK3C2AO00443 1686 aa11.72□□□□□ -0.53
RNU4-59P-201ENST00000364447 ZBTB7CA1YPR0 619 aa11.72□□□□□ -0.53
RNU4-59P-201ENST00000364447 GCP02774 474 aa11.72□□□□□ -0.53
RNU4-59P-201ENST00000364447 SIN3AQ96ST3 1273 aa11.72□□□□□ -0.53
RNU4-59P-201ENST00000364447 CABP1Q9NZU7 370 aa11.72□□□□□ -0.53
RNU4-59P-201ENST00000364447 NLRP6P59044 892 aa11.71□□□□□ -0.53
RNU4-59P-201ENST00000364447 EN1Q05925 392 aaPredicted RBP11.71□□□□□ -0.53
RNU4-59P-201ENST00000364447 PDE3BQ13370 1112 aa11.71□□□□□ -0.53
RNU4-59P-201ENST00000364447 LARP1Q6PKG0 1096 aaKnown RBP11.71□□□□□ -0.53
RNU4-59P-201ENST00000364447 FAM196AQ6ZSG2 479 aa11.71□□□□□ -0.53
RNU4-59P-201ENST00000364447 BARGINQ6ZT62 677 aa11.71□□□□□ -0.53
RNU4-59P-201ENST00000364447 AKAP12Q02952 1782 aa11.71□□□□□ -0.54
RNU4-59P-201ENST00000364447 SLIT3O75094 1523 aa11.7□□□□□ -0.54
RNU4-59P-201ENST00000364447 COL5A2P05997 1499 aaPredicted RBP11.7□□□□□ -0.54
RNU4-59P-201ENST00000364447 DISP2A7MBM2 1401 aa11.7□□□□□ -0.54
RNU4-59P-201ENST00000364447 SRCAPQ6ZRS2 3230 aa11.7□□□□□ -0.54
RNU4-59P-201ENST00000364447 PARP4Q9UKK3 1724 aaKnown RBP11.7□□□□□ -0.54
RNU4-59P-201ENST00000364447 PSDA5PKW4 1024 aaPredicted RBP11.7□□□□□ -0.54
RNU4-59P-201ENST00000364447 TCP11L2Q8N4U5 519 aa11.7□□□□□ -0.54
RNU4-59P-201ENST00000364447 TRIM37O94972 964 aa11.69□□□□□ -0.54
RNU4-59P-201ENST00000364447 THRAP3Q9Y2W1 955 aaKnown RBP11.69□□□□□ -0.54
RNU4-59P-201ENST00000364447 CRB1P82279 1406 aa11.69□□□□□ -0.54
RNU4-59P-201ENST00000364447 AATKQ6ZMQ8 1374 aa11.67□□□□□ -0.54
RNU4-59P-201ENST00000364447 WNK3Q9BYP7 1800 aa11.67□□□□□ -0.54
RNU4-59P-201ENST00000364447 APBA3O96018 575 aa11.67□□□□□ -0.54
RNU4-59P-201ENST00000364447 EZH2Q15910 746 aaKnown RBP11.67□□□□□ -0.54
RNU4-59P-201ENST00000364447 RREB1Q92766 1687 aa11.67□□□□□ -0.54
RNU4-59P-201ENST00000364447 COL18A1P39060 1754 aa11.67□□□□□ -0.54
RNU4-59P-201ENST00000364447 RGPD5Q99666 1765 aa11.67□□□□□ -0.54
RNU4-59P-201ENST00000364447 PARD3Q8TEW0 1356 aa11.67□□□□□ -0.54
RNU4-59P-201ENST00000364447 MON2Q7Z3U7 1717 aa11.66□□□□□ -0.54
RNU4-59P-201ENST00000364447 R3HDM1Q15032 1099 aaKnown RBP11.66□□□□□ -0.54
RNU4-59P-201ENST00000364447 ZNF692Q9BU19 519 aaPredicted RBP11.66□□□□□ -0.54
RNU4-59P-201ENST00000364447 LRRC37A3O60309 1634 aa11.66□□□□□ -0.54
RNU4-59P-201ENST00000364447 CPSF1Q10570 1443 aaKnown RBP11.66□□□□□ -0.54
RNU4-59P-201ENST00000364447 TTC21AQ8NDW8 1320 aa11.65□□□□□ -0.54
RNU4-59P-201ENST00000364447 TOM1L2Q6ZVM7 507 aa11.65□□□□□ -0.54
RNU4-59P-201ENST00000364447 NUP188Q5SRE5 1749 aa11.65□□□□□ -0.54
RNU4-59P-201ENST00000364447 KTN1Q86UP2 1357 aaKnown RBP11.65□□□□□ -0.55
RNU4-59P-201ENST00000364447 TTC21BQ7Z4L5 1316 aa11.64□□□□□ -0.55
RNU4-59P-201ENST00000364447 OVOS2A0A0G2JMS6 1433 aa11.64□□□□□ -0.55
RNU4-59P-201ENST00000364447 OVOS2A0A0J9YW53 1432 aa11.64□□□□□ -0.55
RNU4-59P-201ENST00000364447 OVOS2Q6IE36 1432 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms