RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 ZNF777Q9ULD5 760 aaPredicted RBP8.62□□□□□ -1.03
RNU6-560P-201ENST00000364007 PLA2G2CQ5R387 149 aa8.61□□□□□ -1.03
RNU6-560P-201ENST00000364007 UNC93B1Q9H1C4 597 aa8.61□□□□□ -1.03
RNU6-560P-201ENST00000364007 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.61□□□□□ -1.03
RNU6-560P-201ENST00000364007 FKBPLQ9UIM3 349 aa8.61□□□□□ -1.03
RNU6-560P-201ENST00000364007 ZNF330Q9Y3S2 320 aaPredicted RBP8.61□□□□□ -1.03
RNU6-560P-201ENST00000364007 POM121CA8CG34 1229 aa8.59□□□□□ -1.03
RNU6-560P-201ENST00000364007 C1orf115Q9H7X2 142 aa8.59□□□□□ -1.03
RNU6-560P-201ENST00000364007 GGCXP38435 758 aa8.58□□□□□ -1.04
RNU6-560P-201ENST00000364007 VAC14Q08AM6 782 aa8.58□□□□□ -1.04
RNU6-560P-201ENST00000364007 ANKLE1Q8NAG6 615 aa8.58□□□□□ -1.04
RNU6-560P-201ENST00000364007 BAP1Q92560 729 aa8.58□□□□□ -1.04
RNU6-560P-201ENST00000364007 PLA2G2EQ9NZK7 142 aa8.58□□□□□ -1.04
RNU6-560P-201ENST00000364007 LINC01559Q495D7 138 aa8.57□□□□□ -1.04
RNU6-560P-201ENST00000364007 IFFO2Q5TF58 517 aa8.56□□□□□ -1.04
RNU6-560P-201ENST00000364007 WWC1Q8IX03 1113 aa8.56□□□□□ -1.04
RNU6-560P-201ENST00000364007 PNMA1Q8ND90 353 aa8.56□□□□□ -1.04
RNU6-560P-201ENST00000364007 FBXO45P0C2W1 286 aa8.55□□□□□ -1.04
RNU6-560P-201ENST00000364007 ARMC2Q8NEN0 867 aa8.55□□□□□ -1.04
RNU6-560P-201ENST00000364007 EMID1Q96A84 441 aaPredicted RBP8.55□□□□□ -1.04
RNU6-560P-201ENST00000364007 OCSTAMPQ9BR26 566 aa8.55□□□□□ -1.04
RNU6-560P-201ENST00000364007 ZBTB24O43167 697 aaPredicted RBP8.54□□□□□ -1.04
RNU6-560P-201ENST00000364007 WASHC4Q2M389 1173 aa8.54□□□□□ -1.04
RNU6-560P-201ENST00000364007 PDXDC2PQ6P474 469 aa8.54□□□□□ -1.04
RNU6-560P-201ENST00000364007 LIAT1Q6ZQX7 453 aa8.54□□□□□ -1.04
RNU6-560P-201ENST00000364007 FOXJ1Q92949 421 aa8.54□□□□□ -1.04
RNU6-560P-201ENST00000364007 ZC3H4Q9UPT8 1303 aaKnown RBP8.54□□□□□ -1.04
RNU6-560P-201ENST00000364007 ZBBXA8MT70 800 aa8.53□□□□□ -1.04
RNU6-560P-201ENST00000364007 NR1H3Q13133 447 aa8.53□□□□□ -1.04
RNU6-560P-201ENST00000364007 SH3BP2P78314 561 aa8.52□□□□□ -1.05
RNU6-560P-201ENST00000364007 NBPF14Q5TI25 921 aa8.52□□□□□ -1.05
RNU6-560P-201ENST00000364007 ADAMTS19Q8TE59 1207 aa8.52□□□□□ -1.05
RNU6-560P-201ENST00000364007 GPKOWQ92917 476 aaPredicted RBP eCLIP8.52□□□□□ -1.05
RNU6-560P-201ENST00000364007 SKOR1P84550 965 aa8.51□□□□□ -1.05
RNU6-560P-201ENST00000364007 PTK2Q05397 1052 aa8.51□□□□□ -1.05
RNU6-560P-201ENST00000364007 TRIM32Q13049 653 aa8.51□□□□□ -1.05
RNU6-560P-201ENST00000364007 C4orf48Q5BLP8 95 aa8.51□□□□□ -1.05
RNU6-560P-201ENST00000364007 HDGFL1Q5TGJ6 251 aa8.51□□□□□ -1.05
RNU6-560P-201ENST00000364007 SH3BP5LQ7L8J4 393 aa8.51□□□□□ -1.05
RNU6-560P-201ENST00000364007 ZNF511Q8NB15 262 aa8.51□□□□□ -1.05
RNU6-560P-201ENST00000364007 ARHGAP9Q9BRR9 750 aa8.51□□□□□ -1.05
RNU6-560P-201ENST00000364007 PLSCR2Q9NRY7 297 aa8.51□□□□□ -1.05
RNU6-560P-201ENST00000364007 A0A0G2JS52 829 aa8.5□□□□□ -1.05
RNU6-560P-201ENST00000364007 RPIAP49247 311 aa8.49□□□□□ -1.05
RNU6-560P-201ENST00000364007 AGERQ15109 404 aa8.49□□□□□ -1.05
RNU6-560P-201ENST00000364007 SH3RF1Q7Z6J0 888 aa8.49□□□□□ -1.05
RNU6-560P-201ENST00000364007 ADAM32Q8TC27 787 aa8.49□□□□□ -1.05
RNU6-560P-201ENST00000364007 GLMNQ92990 594 aa8.49□□□□□ -1.05
RNU6-560P-201ENST00000364007 CARD14Q9BXL6 1004 aa8.49□□□□□ -1.05
RNU6-560P-201ENST00000364007 ALG2Q9H553 416 aa8.49□□□□□ -1.05
RNU6-560P-201ENST00000364007 GPSM3Q9Y4H4 160 aa8.49□□□□□ -1.05
RNU6-560P-201ENST00000364007 MAGEB6P1A0A0J9YX57 407 aa8.48□□□□□ -1.05
RNU6-560P-201ENST00000364007 SLC19A1P41440 591 aa8.48□□□□□ -1.05
RNU6-560P-201ENST00000364007 ZBTB33Q86T24 672 aa8.48□□□□□ -1.05
RNU6-560P-201ENST00000364007 CALR3Q96L12 384 aaKnown RBP8.48□□□□□ -1.05
RNU6-560P-201ENST00000364007 ARID3AQ99856 593 aa8.48□□□□□ -1.05
RNU6-560P-201ENST00000364007 BPHLQ86WA6 291 aaPredicted RBP8.47□□□□□ -1.05
RNU6-560P-201ENST00000364007 CCDC82Q8N4S0 544 aa8.47□□□□□ -1.05
RNU6-560P-201ENST00000364007 CD2BP2O95400 341 aaKnown RBP8.46□□□□□ -1.06
RNU6-560P-201ENST00000364007 EIF4G2P78344 907 aaKnown RBP eCLIP8.46□□□□□ -1.06
RNU6-560P-201ENST00000364007 SEMA3FQ13275 785 aa8.46□□□□□ -1.06
RNU6-560P-201ENST00000364007 PCDHB9Q9Y5E1 797 aa8.46□□□□□ -1.06
RNU6-560P-201ENST00000364007 ERFEQ4G0M1 354 aa8.45□□□□□ -1.06
RNU6-560P-201ENST00000364007 WNT7BP56706 349 aa8.44□□□□□ -1.06
RNU6-560P-201ENST00000364007 RC3H1Q5TC82 1133 aaKnown RBP8.44□□□□□ -1.06
RNU6-560P-201ENST00000364007 SOX11P35716 441 aa8.43□□□□□ -1.06
RNU6-560P-201ENST00000364007 SPRYD7Q5W111 196 aa8.43□□□□□ -1.06
RNU6-560P-201ENST00000364007 PRKD2Q9BZL6 878 aa8.43□□□□□ -1.06
RNU6-560P-201ENST00000364007 DZIP3Q86Y13 1208 aaKnown RBP8.42□□□□□ -1.06
RNU6-560P-201ENST00000364007 C1QTNF2Q9BXJ5 285 aa8.42□□□□□ -1.06
RNU6-560P-201ENST00000364007 CEP126Q9P2H0 1117 aa8.42□□□□□ -1.06
RNU6-560P-201ENST00000364007 VARSP26640 1264 aaKnown RBP8.41□□□□□ -1.06
RNU6-560P-201ENST00000364007 EHBP1Q8NDI1 1231 aa8.41□□□□□ -1.06
RNU6-560P-201ENST00000364007 CCDC97Q96F63 343 aaPredicted RBP8.41□□□□□ -1.06
RNU6-560P-201ENST00000364007 UCN2Q96RP3 112 aa8.41□□□□□ -1.06
RNU6-560P-201ENST00000364007 PIK3CDO00329 1044 aa8.4□□□□□ -1.06
RNU6-560P-201ENST00000364007 SERPINA10Q9UK55 444 aa8.4□□□□□ -1.06
RNU6-560P-201ENST00000364007 SIAH2O43255 324 aa8.39□□□□□ -1.07
RNU6-560P-201ENST00000364007 GIGYF1O75420 1035 aaPredicted RBP8.39□□□□□ -1.07
RNU6-560P-201ENST00000364007 ZNF697Q5TEC3 545 aa8.39□□□□□ -1.07
RNU6-560P-201ENST00000364007 ZNF598Q86UK7 904 aaKnown RBP8.39□□□□□ -1.07
RNU6-560P-201ENST00000364007 FOXC1Q12948 553 aa8.38□□□□□ -1.07
RNU6-560P-201ENST00000364007 ARID5BQ14865 1188 aa8.38□□□□□ -1.07
RNU6-560P-201ENST00000364007 TSGA10IPQ3SY00 556 aa8.38□□□□□ -1.07
RNU6-560P-201ENST00000364007 TBC1D9Q6ZT07 1266 aa8.38□□□□□ -1.07
RNU6-560P-201ENST00000364007 TRMT44Q8IYL2 757 aaKnown RBP8.38□□□□□ -1.07
RNU6-560P-201ENST00000364007 PHTF2Q8N3S3 785 aa8.38□□□□□ -1.07
RNU6-560P-201ENST00000364007 FAM174AQ8TBP5 190 aa8.38□□□□□ -1.07
RNU6-560P-201ENST00000364007 SLC10A4Q96EP9 437 aa8.38□□□□□ -1.07
RNU6-560P-201ENST00000364007 MRGPRX2Q96LB1 330 aa8.38□□□□□ -1.07
RNU6-560P-201ENST00000364007 TFIP11Q9UBB9 837 aaKnown RBP8.38□□□□□ -1.07
RNU6-560P-201ENST00000364007 V9GY48 417 aaPredicted RBP8.38□□□□□ -1.07
RNU6-560P-201ENST00000364007 PALM3A6NDB9 673 aaPredicted RBP8.37□□□□□ -1.07
RNU6-560P-201ENST00000364007 WNT7AO00755 349 aa8.37□□□□□ -1.07
RNU6-560P-201ENST00000364007 MCCD1P59942 119 aaPredicted RBP8.37□□□□□ -1.07
RNU6-560P-201ENST00000364007 PPP1R12CQ9BZL4 782 aa8.37□□□□□ -1.07
RNU6-560P-201ENST00000364007 PKD2L1Q9P0L9 805 aa8.37□□□□□ -1.07
RNU6-560P-201ENST00000364007 TLL2Q9Y6L7 1015 aa8.37□□□□□ -1.07
RNU6-560P-201ENST00000364007 RFX1P22670 979 aa8.36□□□□□ -1.07
RNU6-560P-201ENST00000364007 SLFNL1Q499Z3 407 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 221.7 ms