RNA–Protein interactions for RNA: ENST00000361813.5

SMG5-201, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG5, Length 4,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-201ENST00000361813 SURF6O75683 361 aaKnown RBP21.54■■□□□ 1.04
SMG5-201ENST00000361813 UBTFL1P0CB47 393 aaPredicted RBP21.53■■□□□ 1.04
SMG5-201ENST00000361813 TEFQ10587 303 aa21.53■■□□□ 1.04
SMG5-201ENST00000361813 PARD3Q8TEW0 1356 aa21.53■■□□□ 1.04
SMG5-201ENST00000361813 SLC4A2P04920 1241 aa21.52■■□□□ 1.04
SMG5-201ENST00000361813 RNF20Q5VTR2 975 aa21.52■■□□□ 1.04
SMG5-201ENST00000361813 SYNJ2O15056 1496 aa21.52■■□□□ 1.04
SMG5-201ENST00000361813 DNMBPQ6XZF7 1577 aa21.51■■□□□ 1.03
SMG5-201ENST00000361813 LETM1O95202 739 aaPredicted RBP21.51■■□□□ 1.03
SMG5-201ENST00000361813 PRAM1Q96QH2 718 aa21.51■■□□□ 1.03
SMG5-201ENST00000361813 ZMYND15Q9H091 742 aa21.51■■□□□ 1.03
SMG5-201ENST00000361813 GNAI3P08754 354 aa21.5■■□□□ 1.03
SMG5-201ENST00000361813 TPD52L1Q16890 204 aaPredicted RBP21.5■■□□□ 1.03
SMG5-201ENST00000361813 GOLGA6L1Q8N7Z2 621 aa21.5■■□□□ 1.03
SMG5-201ENST00000361813 WDR33Q9C0J8 1336 aaKnown RBP21.49■■□□□ 1.03
SMG5-201ENST00000361813 BICRAQ9NZM4 1560 aa21.49■■□□□ 1.03
SMG5-201ENST00000361813 CABP1Q9NZU7 370 aa21.49■■□□□ 1.03
SMG5-201ENST00000361813 TPM3P06753 285 aa21.49■■□□□ 1.03
SMG5-201ENST00000361813 CSB-PGBD3P0DP91 1061 aa21.49■■□□□ 1.03
SMG5-201ENST00000361813 PDCL3Q9H2J4 239 aa21.49■■□□□ 1.03
SMG5-201ENST00000361813 TNNQ9UQP3 1299 aa21.48■■□□□ 1.03
SMG5-201ENST00000361813 PLEKHH1Q9ULM0 1364 aa21.48■■□□□ 1.03
SMG5-201ENST00000361813 CCDC73Q6ZRK6 1079 aa21.48■■□□□ 1.03
SMG5-201ENST00000361813 CCDC34Q96HJ3 373 aa21.48■■□□□ 1.03
SMG5-201ENST00000361813 ARHGEF11O15085 1522 aa21.48■■□□□ 1.03
SMG5-201ENST00000361813 GNAI2P04899 355 aa21.48■■□□□ 1.03
SMG5-201ENST00000361813 TAF7LQ5H9L4 462 aa21.47■■□□□ 1.03
SMG5-201ENST00000361813 G3BP1Q13283 466 aaKnown RBP eCLIP21.47■■□□□ 1.03
SMG5-201ENST00000361813 PEG3Q9GZU2 1588 aa21.47■■□□□ 1.03
SMG5-201ENST00000361813 NPHP1O15259 732 aa21.46■■□□□ 1.03
SMG5-201ENST00000361813 HSP90AB4PQ58FF6 505 aa21.46■■□□□ 1.03
SMG5-201ENST00000361813 GPRASP1Q5JY77 1395 aa21.46■■□□□ 1.03
SMG5-201ENST00000361813 CNTROBQ8N137 903 aa21.46■■□□□ 1.03
SMG5-201ENST00000361813 BAG4O95429 457 aaKnown RBP21.46■■□□□ 1.03
SMG5-201ENST00000361813 UPF3BQ9BZI7 483 aaKnown RBP21.46■■□□□ 1.03
SMG5-201ENST00000361813 RRAGDQ9NQL2 400 aaPredicted RBP21.46■■□□□ 1.03
SMG5-201ENST00000361813 TBC1D9Q6ZT07 1266 aa21.45■■□□□ 1.02
SMG5-201ENST00000361813 PRDM10Q9NQV6 1147 aa21.45■■□□□ 1.02
SMG5-201ENST00000361813 TOMM22Q9NS69 142 aa21.45■■□□□ 1.02
SMG5-201ENST00000361813 SMARCA5O60264 1052 aaPredicted RBP21.45■■□□□ 1.02
SMG5-201ENST00000361813 ZNF428Q96B54 188 aa21.45■■□□□ 1.02
SMG5-201ENST00000361813 SULT6B1Q6IMI4 303 aa21.45■■□□□ 1.02
SMG5-201ENST00000361813 PER1O15534 1290 aaPredicted RBP21.44■■□□□ 1.02
SMG5-201ENST00000361813 FCHSD2O94868 740 aa21.44■■□□□ 1.02
SMG5-201ENST00000361813 LRRCC1Q9C099 1032 aa21.44■■□□□ 1.02
SMG5-201ENST00000361813 MAP4K4O95819 1239 aaPredicted RBP21.44■■□□□ 1.02
SMG5-201ENST00000361813 CLASRPQ8N2M8 674 aaKnown RBP21.44■■□□□ 1.02
SMG5-201ENST00000361813 SDF4Q9BRK5 362 aa21.43■■□□□ 1.02
SMG5-201ENST00000361813 RALGAPBQ86X10 1494 aa21.43■■□□□ 1.02
SMG5-201ENST00000361813 RLBP1P12271 317 aa21.43■■□□□ 1.02
SMG5-201ENST00000361813 SPINK5Q9NQ38 1064 aaPredicted RBP21.43■■□□□ 1.02
SMG5-201ENST00000361813 CCDC192P0DO97 292 aa21.43■■□□□ 1.02
SMG5-201ENST00000361813 PLB1Q6P1J6 1458 aa21.43■■□□□ 1.02
SMG5-201ENST00000361813 BMP2KLQ5H9B9 411 aa21.43■■□□□ 1.02
SMG5-201ENST00000361813 RPAP2Q8IXW5 612 aaPredicted RBP21.43■■□□□ 1.02
SMG5-201ENST00000361813 IQGAP2Q13576 1575 aa21.42■■□□□ 1.02
SMG5-201ENST00000361813 EXOC6BQ9Y2D4 811 aa21.42■■□□□ 1.02
SMG5-201ENST00000361813 NEXNQ0ZGT2 675 aa21.41■■□□□ 1.02
SMG5-201ENST00000361813 KLHL40Q2TBA0 621 aa21.41■■□□□ 1.02
SMG5-201ENST00000361813 MNS1Q8NEH6 495 aa21.41■■□□□ 1.02
SMG5-201ENST00000361813 TEX35Q5T0J7 233 aa21.41■■□□□ 1.02
SMG5-201ENST00000361813 CPLX1O14810 134 aa21.41■■□□□ 1.02
SMG5-201ENST00000361813 CDK19Q9BWU1 502 aa21.41■■□□□ 1.02
SMG5-201ENST00000361813 RBM27Q9P2N5 1060 aaKnown RBP21.41■■□□□ 1.02
SMG5-201ENST00000361813 KIAA0586Q9BVV6 1533 aa21.4■■□□□ 1.02
SMG5-201ENST00000361813 UGGT2Q9NYU1 1516 aa21.4■■□□□ 1.02
SMG5-201ENST00000361813 NFE2L2Q16236 605 aa21.4■■□□□ 1.02
SMG5-201ENST00000361813 TESK2Q96S53 571 aa21.4■■□□□ 1.02
SMG5-201ENST00000361813 IL1RAPL2Q9NP60 686 aa21.4■■□□□ 1.02
SMG5-201ENST00000361813 PDCP20941 246 aa21.4■■□□□ 1.02
SMG5-201ENST00000361813 CEBPZQ03701 1054 aaKnown RBP21.4■■□□□ 1.02
SMG5-201ENST00000361813 KDM2BQ8NHM5 1336 aa21.4■■□□□ 1.02
SMG5-201ENST00000361813 C1orf141Q5JVX7 400 aa21.39■■□□□ 1.02
SMG5-201ENST00000361813 CCDC30Q5VVM6 783 aa21.39■■□□□ 1.02
SMG5-201ENST00000361813 FMNL2Q96PY5 1086 aa21.39■■□□□ 1.02
SMG5-201ENST00000361813 EID1Q9Y6B2 187 aa21.39■■□□□ 1.02
SMG5-201ENST00000361813 PES1O00541 588 aaKnown RBP21.39■■□□□ 1.01
SMG5-201ENST00000361813 RBM42Q9BTD8 480 aaKnown RBP21.39■■□□□ 1.01
SMG5-201ENST00000361813 ADGRF5Q8IZF2 1346 aa21.39■■□□□ 1.01
SMG5-201ENST00000361813 ALDH1L2Q3SY69 923 aa21.39■■□□□ 1.01
SMG5-201ENST00000361813 CCDC141Q6ZP82 1450 aa21.38■■□□□ 1.01
SMG5-201ENST00000361813 CHMP4CQ96CF2 233 aa21.38■■□□□ 1.01
SMG5-201ENST00000361813 GDPD2Q9HCC8 539 aa21.38■■□□□ 1.01
SMG5-201ENST00000361813 CUL7Q14999 1698 aa21.38■■□□□ 1.01
SMG5-201ENST00000361813 PSMA5P28066 241 aa21.38■■□□□ 1.01
SMG5-201ENST00000361813 THOC2Q8NI27 1593 aaKnown RBP21.38■■□□□ 1.01
SMG5-201ENST00000361813 DCTN1Q14203 1278 aa21.38■■□□□ 1.01
SMG5-201ENST00000361813 FSD1Q9BTV5 496 aa21.38■■□□□ 1.01
SMG5-201ENST00000361813 RASSF8Q8NHQ8 419 aa21.38■■□□□ 1.01
SMG5-201ENST00000361813 CCT4P50991 539 aaKnown RBP21.37■■□□□ 1.01
SMG5-201ENST00000361813 CCDC112Q8NEF3 446 aa21.37■■□□□ 1.01
SMG5-201ENST00000361813 CBX1P83916 185 aa21.37■■□□□ 1.01
SMG5-201ENST00000361813 GPS2Q13227 327 aa21.37■■□□□ 1.01
SMG5-201ENST00000361813 TNMDQ9H2S6 317 aa21.37■■□□□ 1.01
SMG5-201ENST00000361813 ARGLU1Q9NWB6 273 aaPredicted RBP21.37■■□□□ 1.01
SMG5-201ENST00000361813 HDAC1Q13547 482 aaPredicted RBP21.36■■□□□ 1.01
SMG5-201ENST00000361813 USP25Q9UHP3 1055 aa21.36■■□□□ 1.01
SMG5-201ENST00000361813 RRS1Q15050 365 aaKnown RBP21.36■■□□□ 1.01
SMG5-201ENST00000361813 CYP46A1Q9Y6A2 500 aa21.36■■□□□ 1.01
SMG5-201ENST00000361813 LARP1BQ659C4 914 aaKnown RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms