RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 PPM1EQ8WY54 764 aa20.54■□□□□ 0.88
CACNA1A-201ENST00000360228 TICAM2Q86XR7 235 aa20.53■□□□□ 0.88
CACNA1A-201ENST00000360228 CCDC102AQ96A19 550 aa20.53■□□□□ 0.88
CACNA1A-201ENST00000360228 TRAK1Q9UPV9 953 aa20.53■□□□□ 0.88
CACNA1A-201ENST00000360228 STAMBPO95630 424 aa20.52■□□□□ 0.88
CACNA1A-201ENST00000360228 ATP2B2Q01814 1243 aa20.52■□□□□ 0.88
CACNA1A-201ENST00000360228 CFAP45Q9UL16 551 aa20.52■□□□□ 0.88
CACNA1A-201ENST00000360228 LNPKQ9C0E8 428 aa20.52■□□□□ 0.87
CACNA1A-201ENST00000360228 ZNF396Q96N95 335 aaPredicted RBP20.51■□□□□ 0.87
CACNA1A-201ENST00000360228 SSR1P43307 286 aaKnown RBP20.51■□□□□ 0.87
CACNA1A-201ENST00000360228 DZIP1LQ8IYY4 767 aaKnown RBP20.51■□□□□ 0.87
CACNA1A-201ENST00000360228 RIC3Q7Z5B4 369 aa20.51■□□□□ 0.87
CACNA1A-201ENST00000360228 NFKBIBQ15653 356 aa20.49■□□□□ 0.87
CACNA1A-201ENST00000360228 ANAPC15P60006 121 aa20.49■□□□□ 0.87
CACNA1A-201ENST00000360228 PANK3Q9H999 370 aa20.49■□□□□ 0.87
CACNA1A-201ENST00000360228 TRAK2O60296 914 aa20.49■□□□□ 0.87
CACNA1A-201ENST00000360228 AIMP1Q12904 312 aaKnown RBP20.48■□□□□ 0.87
CACNA1A-201ENST00000360228 UQCRHLA0A096LP55 91 aa20.48■□□□□ 0.87
CACNA1A-201ENST00000360228 UQCRHP07919 91 aa20.48■□□□□ 0.87
CACNA1A-201ENST00000360228 PDCP20941 246 aa20.48■□□□□ 0.87
CACNA1A-201ENST00000360228 RAB3GAP2Q9H2M9 1393 aa20.48■□□□□ 0.87
CACNA1A-201ENST00000360228 ANKRD30AQ9BXX3 1397 aa20.48■□□□□ 0.87
CACNA1A-201ENST00000360228 CCDC113Q9H0I3 377 aa20.48■□□□□ 0.87
CACNA1A-201ENST00000360228 TBC1D2BQ9UPU7 963 aa20.47■□□□□ 0.87
CACNA1A-201ENST00000360228 WASHC2CQ9Y4E1 1318 aa20.47■□□□□ 0.87
CACNA1A-201ENST00000360228 FIBPO43427 364 aa20.47■□□□□ 0.87
CACNA1A-201ENST00000360228 FEZ1Q99689 392 aa20.47■□□□□ 0.87
CACNA1A-201ENST00000360228 KIAA1328Q86T90 577 aa20.47■□□□□ 0.87
CACNA1A-201ENST00000360228 KIF3BO15066 747 aa20.46■□□□□ 0.87
CACNA1A-201ENST00000360228 DACH1Q9UI36 760 aa20.46■□□□□ 0.87
CACNA1A-201ENST00000360228 IBSPP21815 317 aaPredicted RBP20.46■□□□□ 0.87
CACNA1A-201ENST00000360228 DDX23Q9BUQ8 820 aaKnown RBP20.46■□□□□ 0.87
CACNA1A-201ENST00000360228 PRPF40AO75400 957 aaKnown RBP20.46■□□□□ 0.87
CACNA1A-201ENST00000360228 FSD1Q9BTV5 496 aa20.46■□□□□ 0.87
CACNA1A-201ENST00000360228 MBD3O95983 291 aa20.46■□□□□ 0.87
CACNA1A-201ENST00000360228 CCDC192P0DO97 292 aa20.45■□□□□ 0.87
CACNA1A-201ENST00000360228 TRIM21P19474 475 aaKnown RBP20.45■□□□□ 0.87
CACNA1A-201ENST00000360228 STK38Q15208 465 aa20.45■□□□□ 0.87
CACNA1A-201ENST00000360228 JAKMIP3Q5VZ66 844 aa20.45■□□□□ 0.86
CACNA1A-201ENST00000360228 DNAJC2Q99543 621 aaKnown RBP20.45■□□□□ 0.86
CACNA1A-201ENST00000360228 RIPK4P57078 832 aa20.45■□□□□ 0.86
CACNA1A-201ENST00000360228 TMCO3Q6UWJ1 677 aa20.45■□□□□ 0.86
CACNA1A-201ENST00000360228 TNMDQ9H2S6 317 aa20.45■□□□□ 0.86
CACNA1A-201ENST00000360228 RBM25P49756 843 aaKnown RBP20.45■□□□□ 0.86
CACNA1A-201ENST00000360228 FAM107BQ9H098 131 aa20.44■□□□□ 0.86
CACNA1A-201ENST00000360228 PHF23Q9BUL5 403 aaPredicted RBP20.44■□□□□ 0.86
CACNA1A-201ENST00000360228 JMYQ8N9B5 988 aa20.44■□□□□ 0.86
CACNA1A-201ENST00000360228 EVC2Q86UK5 1308 aa20.44■□□□□ 0.86
CACNA1A-201ENST00000360228 DCAF8L1A6NGE4 600 aa20.43■□□□□ 0.86
CACNA1A-201ENST00000360228 ZBED9Q6R2W3 1325 aa20.43■□□□□ 0.86
CACNA1A-201ENST00000360228 API5Q9BZZ5 524 aaKnown RBP20.43■□□□□ 0.86
CACNA1A-201ENST00000360228 TSPYL4Q9UJ04 414 aa20.43■□□□□ 0.86
CACNA1A-201ENST00000360228 GRIPAP1Q4V328 841 aa20.43■□□□□ 0.86
CACNA1A-201ENST00000360228 ME1P48163 572 aa20.43■□□□□ 0.86
CACNA1A-201ENST00000360228 PUS7Q96PZ0 661 aaKnown RBP20.43■□□□□ 0.86
CACNA1A-201ENST00000360228 PSME1Q06323 249 aa20.43■□□□□ 0.86
CACNA1A-201ENST00000360228 RB1CC1Q8TDY2 1594 aa20.42■□□□□ 0.86
CACNA1A-201ENST00000360228 CDC45O75419 566 aa20.42■□□□□ 0.86
CACNA1A-201ENST00000360228 SHTN1A0MZ66 631 aa20.41■□□□□ 0.86
CACNA1A-201ENST00000360228 UBTFL1P0CB47 393 aaPredicted RBP20.41■□□□□ 0.86
CACNA1A-201ENST00000360228 GOPCQ9HD26 462 aa20.41■□□□□ 0.86
CACNA1A-201ENST00000360228 UACAQ9BZF9 1416 aa20.41■□□□□ 0.86
CACNA1A-201ENST00000360228 AAMPQ13685 434 aa20.4■□□□□ 0.86
CACNA1A-201ENST00000360228 GPATCH11Q8N954 259 aa20.4■□□□□ 0.86
CACNA1A-201ENST00000360228 UBE4AQ14139 1066 aa20.4■□□□□ 0.86
CACNA1A-201ENST00000360228 MPNDQ8N594 471 aa20.4■□□□□ 0.86
CACNA1A-201ENST00000360228 ERC1Q8IUD2 1116 aa20.4■□□□□ 0.86
CACNA1A-201ENST00000360228 CBFA2T2O43439 604 aa20.4■□□□□ 0.86
CACNA1A-201ENST00000360228 CCDC175P0C221 793 aa20.39■□□□□ 0.86
CACNA1A-201ENST00000360228 PRKCSHP14314 528 aaPredicted RBP20.39■□□□□ 0.85
CACNA1A-201ENST00000360228 CRACR2AQ9BSW2 395 aa20.39■□□□□ 0.85
CACNA1A-201ENST00000360228 AEBP1Q8IUX7 1158 aa20.39■□□□□ 0.85
CACNA1A-201ENST00000360228 CALCOCO1Q9P1Z2 691 aa20.39■□□□□ 0.85
CACNA1A-201ENST00000360228 CCDC148Q8NFR7 591 aa20.38■□□□□ 0.85
CACNA1A-201ENST00000360228 FMN1Q68DA7 1419 aa20.38■□□□□ 0.85
CACNA1A-201ENST00000360228 ZNF397Q8NF99 534 aaPredicted RBP20.37■□□□□ 0.85
CACNA1A-201ENST00000360228 STK3Q13188 491 aa20.37■□□□□ 0.85
CACNA1A-201ENST00000360228 CCDC144AA2RUR9 1427 aa20.37■□□□□ 0.85
CACNA1A-201ENST00000360228 NEK4P51957 841 aa20.37■□□□□ 0.85
CACNA1A-201ENST00000360228 KIF6Q6ZMV9 814 aa20.36■□□□□ 0.85
CACNA1A-201ENST00000360228 PDCL2Q8N4E4 241 aa20.36■□□□□ 0.85
CACNA1A-201ENST00000360228 HIP1O00291 1037 aa20.36■□□□□ 0.85
CACNA1A-201ENST00000360228 MPHOSPH10O00566 681 aaKnown RBP20.36■□□□□ 0.85
CACNA1A-201ENST00000360228 EPB41L2O43491 1005 aaKnown RBP20.36■□□□□ 0.85
CACNA1A-201ENST00000360228 TAF4BQ92750 862 aa20.36■□□□□ 0.85
CACNA1A-201ENST00000360228 BRPF3Q9ULD4 1205 aa20.36■□□□□ 0.85
CACNA1A-201ENST00000360228 CCDC69A6NI79 296 aa20.36■□□□□ 0.85
CACNA1A-201ENST00000360228 TRIM22Q8IYM9 498 aa20.36■□□□□ 0.85
CACNA1A-201ENST00000360228 WASHC2AQ641Q2 1341 aa20.36■□□□□ 0.85
CACNA1A-201ENST00000360228 APAF1O14727 1248 aa20.36■□□□□ 0.85
CACNA1A-201ENST00000360228 DIAPH1O60610 1272 aaKnown RBP20.35■□□□□ 0.85
CACNA1A-201ENST00000360228 PSMD1Q99460 953 aa20.35■□□□□ 0.85
CACNA1A-201ENST00000360228 BAZ1AQ9NRL2 1556 aaPredicted RBP20.35■□□□□ 0.85
CACNA1A-201ENST00000360228 PPP1R1BQ9UD71 204 aaPredicted RBP20.35■□□□□ 0.85
CACNA1A-201ENST00000360228 TTC39AQ5SRH9 613 aa20.35■□□□□ 0.85
CACNA1A-201ENST00000360228 POTEJP0CG39 1038 aa20.35■□□□□ 0.85
CACNA1A-201ENST00000360228 SSBP05455 408 aaKnown RBP eCLIP20.34■□□□□ 0.85
CACNA1A-201ENST00000360228 MCM2P49736 904 aa20.34■□□□□ 0.85
CACNA1A-201ENST00000360228 CARMIL2Q6F5E8 1435 aa20.34■□□□□ 0.85
CACNA1A-201ENST00000360228 FAM177BA6PVY3 158 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms