RNA–Protein interactions for RNA: ENST00000358273.8

NF1-202, Transcript of neurofibromin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NF1, Length 12,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-202ENST00000358273 SYNJ1O43426 1573 aa8.29□□□□□ -1.08
NF1-202ENST00000358273 FAM177A1Q8N128 213 aaPredicted RBP8.29□□□□□ -1.08
NF1-202ENST00000358273 PLEKHH1Q9ULM0 1364 aa8.29□□□□□ -1.08
NF1-202ENST00000358273 BECN2A8MW95 431 aa8.29□□□□□ -1.08
NF1-202ENST00000358273 MRVI1Q9Y6F6 885 aa8.29□□□□□ -1.08
NF1-202ENST00000358273 PDZRN3Q9UPQ7 1066 aa8.29□□□□□ -1.08
NF1-202ENST00000358273 LRRC9Q6ZRR7 1453 aa8.29□□□□□ -1.08
NF1-202ENST00000358273 NF2P35240 595 aa8.29□□□□□ -1.08
NF1-202ENST00000358273 SUPT6HQ7KZ85 1726 aaKnown RBP8.29□□□□□ -1.08
NF1-202ENST00000358273 SMTNL1A8MU46 457 aa8.29□□□□□ -1.08
NF1-202ENST00000358273 MAP2K2P36507 400 aa8.29□□□□□ -1.08
NF1-202ENST00000358273 TMCO3Q6UWJ1 677 aa8.29□□□□□ -1.08
NF1-202ENST00000358273 BCL2L13Q9BXK5 485 aa8.28□□□□□ -1.08
NF1-202ENST00000358273 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.28□□□□□ -1.08
NF1-202ENST00000358273 V9GYY5 206 aaPredicted RBP8.28□□□□□ -1.08
NF1-202ENST00000358273 IPO8O15397 1037 aaKnown RBP8.28□□□□□ -1.08
NF1-202ENST00000358273 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.28□□□□□ -1.081e-7■■■■□ 20.8
NF1-202ENST00000358273 BCL2L12Q9HB09 334 aa8.28□□□□□ -1.08
NF1-202ENST00000358273 IVLP07476 585 aa8.28□□□□□ -1.08
NF1-202ENST00000358273 CCDC192P0DO97 292 aa8.28□□□□□ -1.08
NF1-202ENST00000358273 ATP2B3Q16720 1220 aa8.28□□□□□ -1.08
NF1-202ENST00000358273 KRBA2Q6ZNG9 492 aa8.28□□□□□ -1.08
NF1-202ENST00000358273 RGS22Q8NE09 1264 aa8.28□□□□□ -1.08
NF1-202ENST00000358273 MYH9P35579 1960 aaKnown RBP8.28□□□□□ -1.08
NF1-202ENST00000358273 CCDC102AQ96A19 550 aa8.28□□□□□ -1.08
NF1-202ENST00000358273 FAM107BQ9H098 131 aa8.27□□□□□ -1.08
NF1-202ENST00000358273 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.27□□□□□ -1.08
NF1-202ENST00000358273 KIF2AO00139 706 aaPredicted RBP8.27□□□□□ -1.09
NF1-202ENST00000358273 CDC45O75419 566 aa8.27□□□□□ -1.09
NF1-202ENST00000358273 ERLIN1O75477 346 aa8.27□□□□□ -1.09
NF1-202ENST00000358273 CCP110O43303 1012 aa8.27□□□□□ -1.09
NF1-202ENST00000358273 PANK3Q9H999 370 aa8.27□□□□□ -1.09
NF1-202ENST00000358273 FGD6Q6ZV73 1430 aa8.27□□□□□ -1.09
NF1-202ENST00000358273 RUFY1Q96T51 708 aa8.27□□□□□ -1.09
NF1-202ENST00000358273 EIF3JO75822 258 aaKnown RBP8.27□□□□□ -1.09
NF1-202ENST00000358273 PPP2R5AQ15172 486 aa8.26□□□□□ -1.09
NF1-202ENST00000358273 PDILTQ8N807 584 aa8.26□□□□□ -1.09
NF1-202ENST00000358273 HMGB1P09429 215 aaKnown RBP8.26□□□□□ -1.09
NF1-202ENST00000358273 CCDC34Q96HJ3 373 aa8.26□□□□□ -1.09
NF1-202ENST00000358273 EFCC1Q9HA90 598 aa8.26□□□□□ -1.09
NF1-202ENST00000358273 BAG4O95429 457 aaKnown RBP8.26□□□□□ -1.09
NF1-202ENST00000358273 ZSCAN20P17040 1043 aaPredicted RBP8.26□□□□□ -1.09
NF1-202ENST00000358273 CCDC70Q6NSX1 233 aa8.26□□□□□ -1.09
NF1-202ENST00000358273 TTC12Q9H892 705 aaPredicted RBP8.26□□□□□ -1.09
NF1-202ENST00000358273 RNF187Q5TA31 235 aaPredicted RBP8.26□□□□□ -1.09
NF1-202ENST00000358273 TMEM51Q9NW97 253 aa8.26□□□□□ -1.09
NF1-202ENST00000358273 BAZ2BQ9UIF8 2168 aaKnown RBP8.26□□□□□ -1.09
NF1-202ENST00000358273 RIOK3O14730 519 aaKnown RBP8.26□□□□□ -1.09
NF1-202ENST00000358273 CCDC27Q2M243 656 aa8.26□□□□□ -1.09
NF1-202ENST00000358273 CEP135Q66GS9 1140 aa8.26□□□□□ -1.09
NF1-202ENST00000358273 CPSF2Q9P2I0 782 aaKnown RBP8.26□□□□□ -1.09
NF1-202ENST00000358273 BMS1Q14692 1282 aaKnown RBP8.25□□□□□ -1.09
NF1-202ENST00000358273 NKTRP30414 1462 aaKnown RBP8.25□□□□□ -1.09
NF1-202ENST00000358273 SMC2O95347 1197 aa8.25□□□□□ -1.09
NF1-202ENST00000358273 CCDC172P0C7W6 258 aa8.25□□□□□ -1.09
NF1-202ENST00000358273 GBP6Q6ZN66 633 aa8.25□□□□□ -1.09
NF1-202ENST00000358273 ANKRD45Q5TZF3 282 aa8.25□□□□□ -1.09
NF1-202ENST00000358273 RRP7AQ9Y3A4 280 aaKnown RBP8.25□□□□□ -1.09
NF1-202ENST00000358273 MYH11P35749 1972 aa8.25□□□□□ -1.09
NF1-202ENST00000358273 PRIM1P49642 420 aaKnown RBP8.25□□□□□ -1.09
NF1-202ENST00000358273 FILIP1Q7Z7B0 1213 aa8.25□□□□□ -1.09
NF1-202ENST00000358273 RPAINQ86UA6 219 aa8.25□□□□□ -1.09
NF1-202ENST00000358273 CAGE1Q8TC20 777 aa8.25□□□□□ -1.09
NF1-202ENST00000358273 FRMD3A2A2Y4 597 aa8.25□□□□□ -1.09
NF1-202ENST00000358273 ICE2Q659A1 982 aa8.25□□□□□ -1.09
NF1-202ENST00000358273 CLIP2Q9UDT6 1046 aa8.25□□□□□ -1.09
NF1-202ENST00000358273 PAXBP1Q9Y5B6 917 aa8.25□□□□□ -1.09
NF1-202ENST00000358273 FIBPO43427 364 aa8.24□□□□□ -1.09
NF1-202ENST00000358273 LIG1P18858 919 aa8.24□□□□□ -1.09
NF1-202ENST00000358273 GEMIN8Q9NWZ8 242 aaKnown RBP8.24□□□□□ -1.09
NF1-202ENST00000358273 KIF18AQ8NI77 898 aa8.24□□□□□ -1.09
NF1-202ENST00000358273 ZMYM4Q5VZL5 1548 aa8.24□□□□□ -1.09
NF1-202ENST00000358273 CEP83Q9Y592 693 aa8.24□□□□□ -1.09
NF1-202ENST00000358273 CDCA8Q53HL2 280 aa8.24□□□□□ -1.09
NF1-202ENST00000358273 NEK11Q8NG66 645 aa8.24□□□□□ -1.09
NF1-202ENST00000358273 ATP6V1AP38606 617 aa8.24□□□□□ -1.09
NF1-202ENST00000358273 PPM1EQ8WY54 764 aa8.24□□□□□ -1.09
NF1-202ENST00000358273 ABCA5Q8WWZ7 1642 aa8.24□□□□□ -1.09
NF1-202ENST00000358273 VPS37CA5D8V6 355 aaPredicted RBP8.24□□□□□ -1.09
NF1-202ENST00000358273 CCDC183Q5T5S1 534 aa8.24□□□□□ -1.09
NF1-202ENST00000358273 DZIP1LQ8IYY4 767 aaKnown RBP8.24□□□□□ -1.09
NF1-202ENST00000358273 BICD2Q8TD16 824 aa8.24□□□□□ -1.09
NF1-202ENST00000358273 CHGAP10645 457 aaKnown RBP8.24□□□□□ -1.09
NF1-202ENST00000358273 LNPKQ9C0E8 428 aa8.24□□□□□ -1.09
NF1-202ENST00000358273 UBXN4Q92575 508 aa8.23□□□□□ -1.09
NF1-202ENST00000358273 ZKSCAN2Q63HK3 967 aa8.23□□□□□ -1.09
NF1-202ENST00000358273 NEBLO76041 1014 aa8.23□□□□□ -1.09
NF1-202ENST00000358273 SMARCA4P51532 1647 aa8.23□□□□□ -1.09
NF1-202ENST00000358273 MIA2Q96PC5 1412 aa8.23□□□□□ -1.09
NF1-202ENST00000358273 LRPPRCP42704 1394 aaKnown RBP8.23□□□□□ -1.09
NF1-202ENST00000358273 LRSAM1Q6UWE0 723 aa8.23□□□□□ -1.09
NF1-202ENST00000358273 PSMD1Q99460 953 aa8.23□□□□□ -1.09
NF1-202ENST00000358273 MPHOSPH9Q99550 1183 aa8.23□□□□□ -1.09
NF1-202ENST00000358273 TMF1P82094 1093 aa8.23□□□□□ -1.09
NF1-202ENST00000358273 FYB1O15117 783 aa8.23□□□□□ -1.09
NF1-202ENST00000358273 CT47B1P0C2W7 299 aaPredicted RBP8.23□□□□□ -1.09
NF1-202ENST00000358273 NGEFQ8N5V2 710 aa8.23□□□□□ -1.09
NF1-202ENST00000358273 DDX19BQ9UMR2 479 aa8.23□□□□□ -1.09
NF1-202ENST00000358273 CAPN2P17655 700 aa8.23□□□□□ -1.09
NF1-202ENST00000358273 PTPN14Q15678 1187 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms