RNA–Protein interactions for RNA: ENST00000356876.7

TNFRSF25-204, Transcript of TNF receptor superfamily member 25, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF25, Length 1,625 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-204ENST00000356876 ESCO1Q5FWF5 840 aa34.77■■■■□ 3.16
TNFRSF25-204ENST00000356876 ANKRD26Q9UPS8 1709 aa34.76■■■■□ 3.16
TNFRSF25-204ENST00000356876 NME9Q86XW9 330 aa34.76■■■■□ 3.15
TNFRSF25-204ENST00000356876 MSH6P52701 1360 aa34.75■■■■□ 3.15
TNFRSF25-204ENST00000356876 NRKQ7Z2Y5 1582 aa34.74■■■■□ 3.15
TNFRSF25-204ENST00000356876 CADPS2Q86UW7 1296 aa34.73■■■■□ 3.15
TNFRSF25-204ENST00000356876 TTC21AQ8NDW8 1320 aa34.73■■■■□ 3.15
TNFRSF25-204ENST00000356876 C1orf167Q5SNV9 1468 aa34.72■■■■□ 3.15
TNFRSF25-204ENST00000356876 CENPBP07199 599 aaPredicted RBP34.7■■■■□ 3.14
TNFRSF25-204ENST00000356876 COG3Q96JB2 828 aa34.7■■■■□ 3.14
TNFRSF25-204ENST00000356876 SCAF1Q9H7N4 1312 aaKnown RBP34.69■■■■□ 3.14
TNFRSF25-204ENST00000356876 ORAI2Q96SN7 254 aa34.69■■■■□ 3.14
TNFRSF25-204ENST00000356876 MST1RQ04912 1400 aa34.69■■■■□ 3.14
TNFRSF25-204ENST00000356876 XIRP1Q702N8 1843 aaKnown RBP34.67■■■■□ 3.14
TNFRSF25-204ENST00000356876 MTHFSP49914 203 aa34.66■■■■□ 3.14
TNFRSF25-204ENST00000356876 ZRANB1Q9UGI0 708 aa34.66■■■■□ 3.14
TNFRSF25-204ENST00000356876 PSME1Q06323 249 aa34.63■■■■□ 3.13
TNFRSF25-204ENST00000356876 HNRNPUQ00839 825 aaKnown RBP eCLIP34.61■■■■□ 3.13
TNFRSF25-204ENST00000356876 CFAP53Q96M91 514 aa34.61■■■■□ 3.13
TNFRSF25-204ENST00000356876 OVOS2A0A0J9YW53 1432 aa34.6■■■■□ 3.13
TNFRSF25-204ENST00000356876 OVOS2Q6IE36 1432 aa34.6■■■■□ 3.13
TNFRSF25-204ENST00000356876 USP31Q70CQ4 1352 aa34.6■■■■□ 3.13
TNFRSF25-204ENST00000356876 INSRP06213 1382 aa34.59■■■■□ 3.13
TNFRSF25-204ENST00000356876 AATKQ6ZMQ8 1374 aa34.59■■■■□ 3.13
TNFRSF25-204ENST00000356876 KIF1AQ12756 1690 aa34.58■■■■□ 3.13
TNFRSF25-204ENST00000356876 FOXO3O43524 673 aa34.58■■■■□ 3.13
TNFRSF25-204ENST00000356876 WDR43Q15061 677 aaKnown RBP eCLIP34.58■■■■□ 3.13
TNFRSF25-204ENST00000356876 PAK3O75914 559 aaPredicted RBP34.55■■■■□ 3.12
TNFRSF25-204ENST00000356876 POLKQ9UBT6 870 aa34.55■■■■□ 3.12
TNFRSF25-204ENST00000356876 ADAMTS8Q9UP79 889 aa34.54■■■■□ 3.12
TNFRSF25-204ENST00000356876 ABTB2Q8N961 1025 aa34.52■■■■□ 3.12
TNFRSF25-204ENST00000356876 PIK3C2AO00443 1686 aa34.51■■■■□ 3.11
TNFRSF25-204ENST00000356876 FBLN1P23142 703 aa34.51■■■■□ 3.11
TNFRSF25-204ENST00000356876 NLRP6P59044 892 aa34.51■■■■□ 3.11
TNFRSF25-204ENST00000356876 PNPLA6Q8IY17 1366 aa34.49■■■■□ 3.11
TNFRSF25-204ENST00000356876 AEBP2Q6ZN18 517 aaPredicted RBP34.49■■■■□ 3.11
TNFRSF25-204ENST00000356876 KRT28Q7Z3Y7 464 aa34.49■■■■□ 3.11
TNFRSF25-204ENST00000356876 SLAIN2Q9P270 581 aa34.49■■■■□ 3.11
TNFRSF25-204ENST00000356876 SMG6Q86US8 1419 aaKnown RBP34.48■■■■□ 3.11
TNFRSF25-204ENST00000356876 LTBP4Q8N2S1 1624 aa34.46■■■■□ 3.11
TNFRSF25-204ENST00000356876 BLMP54132 1417 aaPredicted RBP34.46■■■■□ 3.11
TNFRSF25-204ENST00000356876 EMILIN1Q9Y6C2 1016 aa34.45■■■■□ 3.11
TNFRSF25-204ENST00000356876 XPCQ01831 940 aaPredicted RBP34.44■■■■□ 3.1
TNFRSF25-204ENST00000356876 USP54Q70EL1 1684 aa34.44■■■■□ 3.1
TNFRSF25-204ENST00000356876 NPHP3Q7Z494 1330 aa34.44■■■■□ 3.1
TNFRSF25-204ENST00000356876 COL3A1P02461 1466 aaPredicted RBP34.43■■■■□ 3.1
TNFRSF25-204ENST00000356876 PPM1GO15355 546 aaPredicted RBP34.43■■■■□ 3.1
TNFRSF25-204ENST00000356876 RRS1Q15050 365 aaKnown RBP34.43■■■■□ 3.1
TNFRSF25-204ENST00000356876 BRINP3Q76B58 766 aa34.43■■■■□ 3.1
TNFRSF25-204ENST00000356876 NUTM2GQ5VZR2 741 aa34.42■■■■□ 3.1
TNFRSF25-204ENST00000356876 ZBED9Q6R2W3 1325 aa34.42■■■■□ 3.1
TNFRSF25-204ENST00000356876 MAP2P11137 1827 aaKnown RBP34.42■■■■□ 3.1
TNFRSF25-204ENST00000356876 SHPRHQ149N8 1683 aa34.41■■■■□ 3.1
TNFRSF25-204ENST00000356876 NUDCQ9Y266 331 aa34.41■■■■□ 3.1
TNFRSF25-204ENST00000356876 CDK12Q9NYV4 1490 aaPredicted RBP34.39■■■■□ 3.1
TNFRSF25-204ENST00000356876 DIAPH1O60610 1272 aaKnown RBP34.39■■■■□ 3.1
TNFRSF25-204ENST00000356876 TRPM3Q9HCF6 1732 aaPredicted RBP34.38■■■■□ 3.09
TNFRSF25-204ENST00000356876 SBNO1A3KN83 1393 aa34.36■■■■□ 3.09
TNFRSF25-204ENST00000356876 DDX17Q92841 729 aaKnown RBP34.36■■■■□ 3.09
TNFRSF25-204ENST00000356876 SOX12O15370 315 aa34.35■■■■□ 3.09
TNFRSF25-204ENST00000356876 MARF1Q9Y4F3 1742 aaKnown RBP34.35■■■■□ 3.09
TNFRSF25-204ENST00000356876 PXDNQ92626 1479 aa34.32■■■■□ 3.08
TNFRSF25-204ENST00000356876 MAP3K19Q56UN5 1328 aa34.32■■■■□ 3.08
TNFRSF25-204ENST00000356876 U2AF1L5P0DN76 240 aaPredicted RBP34.31■■■■□ 3.08
TNFRSF25-204ENST00000356876 U2AF1Q01081 240 aaKnown RBP eCLIP34.31■■■■□ 3.08
TNFRSF25-204ENST00000356876 LMOD2Q6P5Q4 547 aa34.31■■■■□ 3.08
TNFRSF25-204ENST00000356876 KCNH5Q8NCM2 988 aa34.3■■■■□ 3.08
TNFRSF25-204ENST00000356876 U2SURPO15042 1029 aaKnown RBP34.29■■■■□ 3.08
TNFRSF25-204ENST00000356876 IL13P35225 146 aa34.28■■■■□ 3.08
TNFRSF25-204ENST00000356876 CCDC146Q8IYE0 955 aa34.28■■■■□ 3.08
TNFRSF25-204ENST00000356876 KIF24Q5T7B8 1368 aa34.28■■■■□ 3.08
TNFRSF25-204ENST00000356876 USP19O94966 1318 aa34.27■■■■□ 3.08
TNFRSF25-204ENST00000356876 ALS2Q96Q42 1657 aa34.26■■■■□ 3.08
TNFRSF25-204ENST00000356876 FLT4P35916 1363 aa34.25■■■■□ 3.07
TNFRSF25-204ENST00000356876 TNS3Q68CZ2 1445 aa34.25■■■■□ 3.07
TNFRSF25-204ENST00000356876 SENP3-EIF4A1A0A087X0R7 540 aa34.25■■■■□ 3.07
TNFRSF25-204ENST00000356876 SOS2Q07890 1332 aaPredicted RBP34.25■■■■□ 3.07
TNFRSF25-204ENST00000356876 SPATA31A3Q5VYP0 1347 aa34.25■■■■□ 3.07
TNFRSF25-204ENST00000356876 AMPHP49418 695 aa34.24■■■■□ 3.07
TNFRSF25-204ENST00000356876 RUNDC1Q96C34 613 aa34.24■■■■□ 3.07
TNFRSF25-204ENST00000356876 SLIT3O75094 1523 aa34.24■■■■□ 3.07
TNFRSF25-204ENST00000356876 PEAK1Q9H792 1746 aa34.23■■■■□ 3.07
TNFRSF25-204ENST00000356876 GCP02774 474 aa34.22■■■■□ 3.07
TNFRSF25-204ENST00000356876 NFAT5O94916 1531 aa34.22■■■■□ 3.07
TNFRSF25-204ENST00000356876 HSP90AB2PQ58FF8 381 aa34.22■■■■□ 3.07
TNFRSF25-204ENST00000356876 ARHGEF10O15013 1369 aa34.2■■■■□ 3.07
TNFRSF25-204ENST00000356876 APAF1O14727 1248 aa34.19■■■■□ 3.06
TNFRSF25-204ENST00000356876 EIF4A2Q14240 407 aaKnown RBP34.19■■■■□ 3.06
TNFRSF25-204ENST00000356876 PNNQ9H307 717 aaKnown RBP34.19■■■■□ 3.06
TNFRSF25-204ENST00000356876 FCHSD2O94868 740 aa34.19■■■■□ 3.06
TNFRSF25-204ENST00000356876 NGEFQ8N5V2 710 aa34.19■■■■□ 3.06
TNFRSF25-204ENST00000356876 SALL2Q9Y467 1007 aaPredicted RBP34.19■■■■□ 3.06
TNFRSF25-204ENST00000356876 RTL1A6NKG5 1358 aa34.18■■■■□ 3.06
TNFRSF25-204ENST00000356876 HOXC9P31274 260 aa34.17■■■■□ 3.06
TNFRSF25-204ENST00000356876 PLEKHF1Q96S99 279 aa34.15■■■■□ 3.06
TNFRSF25-204ENST00000356876 NHSL1Q5SYE7 1610 aa34.14■■■■□ 3.06
TNFRSF25-204ENST00000356876 ARHGEF25Q86VW2 580 aa34.13■■■■□ 3.05
TNFRSF25-204ENST00000356876 IP6K1Q92551 441 aa34.13■■■■□ 3.05
TNFRSF25-204ENST00000356876 MED1Q15648 1581 aaPredicted RBP34.13■■■■□ 3.05
TNFRSF25-204ENST00000356876 TCP11L2Q8N4U5 519 aa34.12■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms