RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 PSMA5P28066 241 aa13.15□□□□□ -0.31
GTF3C1-201ENST00000356183 CCAR1Q8IX12 1150 aaKnown RBP13.14□□□□□ -0.31
GTF3C1-201ENST00000356183 ANKRD30AQ9BXX3 1397 aa13.14□□□□□ -0.31
GTF3C1-201ENST00000356183 USP8P40818 1118 aa13.14□□□□□ -0.31
GTF3C1-201ENST00000356183 CDK5RAP3Q96JB5 506 aa13.14□□□□□ -0.31
GTF3C1-201ENST00000356183 PDS5BQ9NTI5 1447 aa13.14□□□□□ -0.31
GTF3C1-201ENST00000356183 ESPNB1AK53 854 aa13.14□□□□□ -0.31
GTF3C1-201ENST00000356183 AAMPQ13685 434 aa13.14□□□□□ -0.31
GTF3C1-201ENST00000356183 XBP1P17861 261 aa13.14□□□□□ -0.31
GTF3C1-201ENST00000356183 CNTROBQ8N137 903 aa13.14□□□□□ -0.31
GTF3C1-201ENST00000356183 PPFIBP1Q86W92 1011 aa13.13□□□□□ -0.31
GTF3C1-201ENST00000356183 KIF7Q2M1P5 1343 aa13.13□□□□□ -0.31
GTF3C1-201ENST00000356183 ANKRD18AQ8IVF6 992 aa13.13□□□□□ -0.31
GTF3C1-201ENST00000356183 MBD3O95983 291 aa13.13□□□□□ -0.31
GTF3C1-201ENST00000356183 API5Q9BZZ5 524 aaKnown RBP13.13□□□□□ -0.31
GTF3C1-201ENST00000356183 ERLIN1O75477 346 aa13.13□□□□□ -0.31
GTF3C1-201ENST00000356183 RBM33Q96EV2 1170 aaKnown RBP13.13□□□□□ -0.31
GTF3C1-201ENST00000356183 TNMDQ9H2S6 317 aa13.13□□□□□ -0.31
GTF3C1-201ENST00000356183 EVA1CP58658 441 aa13.13□□□□□ -0.31
GTF3C1-201ENST00000356183 ZNHIT6Q9NWK9 470 aaKnown RBP13.13□□□□□ -0.31
GTF3C1-201ENST00000356183 WASHC2AQ641Q2 1341 aa13.12□□□□□ -0.31
GTF3C1-201ENST00000356183 AKNAQ7Z591 1439 aa13.12□□□□□ -0.31
GTF3C1-201ENST00000356183 STK3Q13188 491 aa13.12□□□□□ -0.31
GTF3C1-201ENST00000356183 TRERF1Q96PN7 1200 aa13.12□□□□□ -0.31
GTF3C1-201ENST00000356183 HNRNPMP52272 730 aaKnown RBP eCLIP13.12□□□□□ -0.31
GTF3C1-201ENST00000356183 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.12□□□□□ -0.31
GTF3C1-201ENST00000356183 CARMIL2Q6F5E8 1435 aa13.11□□□□□ -0.31
GTF3C1-201ENST00000356183 LRRFIP2Q9Y608 721 aaKnown RBP13.11□□□□□ -0.31
GTF3C1-201ENST00000356183 GBP2P32456 591 aaPredicted RBP13.11□□□□□ -0.31
GTF3C1-201ENST00000356183 PDCL2Q8N4E4 241 aa13.11□□□□□ -0.31
GTF3C1-201ENST00000356183 ZNF396Q96N95 335 aaPredicted RBP13.11□□□□□ -0.31
GTF3C1-201ENST00000356183 PAF1Q8N7H5 531 aa13.11□□□□□ -0.31
GTF3C1-201ENST00000356183 TANGO6Q9C0B7 1094 aa13.11□□□□□ -0.31
GTF3C1-201ENST00000356183 CCDC192P0DO97 292 aa13.11□□□□□ -0.31
GTF3C1-201ENST00000356183 NEK4P51957 841 aa13.11□□□□□ -0.31
GTF3C1-201ENST00000356183 SMG6Q86US8 1419 aaKnown RBP13.11□□□□□ -0.31
GTF3C1-201ENST00000356183 DDX58O95786 925 aaKnown RBP13.1□□□□□ -0.31
GTF3C1-201ENST00000356183 GOLGA6L10A0A0M3HER8 536 aa13.1□□□□□ -0.31
GTF3C1-201ENST00000356183 KRT18P05783 430 aaKnown RBP13.1□□□□□ -0.31
GTF3C1-201ENST00000356183 DNAJC2Q99543 621 aaKnown RBP13.1□□□□□ -0.31
GTF3C1-201ENST00000356183 AIMP1Q12904 312 aaKnown RBP13.1□□□□□ -0.31
GTF3C1-201ENST00000356183 IKQ13123 557 aaPredicted RBP13.1□□□□□ -0.31
GTF3C1-201ENST00000356183 FSD1Q9BTV5 496 aa13.1□□□□□ -0.31
GTF3C1-201ENST00000356183 RABEP1Q15276 862 aa13.1□□□□□ -0.31
GTF3C1-201ENST00000356183 BRD4O60885 1362 aaPredicted RBP13.1□□□□□ -0.31
GTF3C1-201ENST00000356183 STK38Q15208 465 aa13.09□□□□□ -0.31
GTF3C1-201ENST00000356183 KIF3BO15066 747 aa13.09□□□□□ -0.31
GTF3C1-201ENST00000356183 SEPT11Q9NVA2 429 aaKnown RBP13.09□□□□□ -0.31
GTF3C1-201ENST00000356183 TSPYL4Q9UJ04 414 aa13.09□□□□□ -0.31
GTF3C1-201ENST00000356183 SYTL4Q96C24 671 aaPredicted RBP13.09□□□□□ -0.31
GTF3C1-201ENST00000356183 DIAPH1O60610 1272 aaKnown RBP13.09□□□□□ -0.31
GTF3C1-201ENST00000356183 FHOD3Q2V2M9 1422 aa13.09□□□□□ -0.31
GTF3C1-201ENST00000356183 MAP4K4O95819 1239 aaPredicted RBP13.08□□□□□ -0.32
GTF3C1-201ENST00000356183 TXLNAP40222 546 aa13.08□□□□□ -0.32
GTF3C1-201ENST00000356183 RIC3Q7Z5B4 369 aa13.08□□□□□ -0.32
GTF3C1-201ENST00000356183 C1orf115Q9H7X2 142 aa13.08□□□□□ -0.32
GTF3C1-201ENST00000356183 SMARCA4P51532 1647 aa13.08□□□□□ -0.32
GTF3C1-201ENST00000356183 NF2P35240 595 aa13.08□□□□□ -0.32
GTF3C1-201ENST00000356183 RUNDC1Q96C34 613 aa13.07□□□□□ -0.32
GTF3C1-201ENST00000356183 HMOX1P09601 288 aa13.07□□□□□ -0.32
GTF3C1-201ENST00000356183 MAP2K1Q02750 393 aaPredicted RBP13.07□□□□□ -0.32
GTF3C1-201ENST00000356183 CFAP45Q9UL16 551 aa13.07□□□□□ -0.32
GTF3C1-201ENST00000356183 EID1Q9Y6B2 187 aa13.07□□□□□ -0.32
GTF3C1-201ENST00000356183 ZHX3Q9H4I2 956 aa13.07□□□□□ -0.32
GTF3C1-201ENST00000356183 EZRP15311 586 aaKnown RBP13.07□□□□□ -0.32
GTF3C1-201ENST00000356183 HSP90AB4PQ58FF6 505 aa13.07□□□□□ -0.32
GTF3C1-201ENST00000356183 KLHL34Q8N239 644 aa13.06□□□□□ -0.32
GTF3C1-201ENST00000356183 IPO4Q8TEX9 1081 aaKnown RBP13.06□□□□□ -0.32
GTF3C1-201ENST00000356183 TMX1Q9H3N1 280 aa13.06□□□□□ -0.32
GTF3C1-201ENST00000356183 PDZRN3Q9UPQ7 1066 aa13.06□□□□□ -0.32
GTF3C1-201ENST00000356183 SHTN1A0MZ66 631 aa13.06□□□□□ -0.32
GTF3C1-201ENST00000356183 ZMYND15Q9H091 742 aa13.06□□□□□ -0.32
GTF3C1-201ENST00000356183 UBTFL1P0CB47 393 aaPredicted RBP13.05□□□□□ -0.32
GTF3C1-201ENST00000356183 TNNT1P13805 278 aa13.05□□□□□ -0.32
GTF3C1-201ENST00000356183 POLR3GO15318 223 aaPredicted RBP13.05□□□□□ -0.32
GTF3C1-201ENST00000356183 CBFA2T2O43439 604 aa13.05□□□□□ -0.32
GTF3C1-201ENST00000356183 MCM4P33991 863 aa13.05□□□□□ -0.32
GTF3C1-201ENST00000356183 ME1P48163 572 aa13.05□□□□□ -0.32
GTF3C1-201ENST00000356183 TMCO3Q6UWJ1 677 aa13.05□□□□□ -0.32
GTF3C1-201ENST00000356183 PDCL3Q9H2J4 239 aa13.05□□□□□ -0.32
GTF3C1-201ENST00000356183 CGNQ9P2M7 1197 aaKnown RBP13.05□□□□□ -0.32
GTF3C1-201ENST00000356183 KIF21BO75037 1637 aa13.05□□□□□ -0.32
GTF3C1-201ENST00000356183 KIAA1328Q86T90 577 aa13.05□□□□□ -0.32
GTF3C1-201ENST00000356183 DACH1Q9UI36 760 aa13.05□□□□□ -0.32
GTF3C1-201ENST00000356183 IQCEQ6IPM2 695 aa13.05□□□□□ -0.32
GTF3C1-201ENST00000356183 CCDC113Q9H0I3 377 aa13.05□□□□□ -0.32
GTF3C1-201ENST00000356183 EVC2Q86UK5 1308 aa13.05□□□□□ -0.32
GTF3C1-201ENST00000356183 CADPSQ9ULU8 1353 aa13.05□□□□□ -0.32
GTF3C1-201ENST00000356183 ZFP91Q96JP5 570 aaPredicted RBP13.05□□□□□ -0.32
GTF3C1-201ENST00000356183 ZHX1Q9UKY1 873 aaPredicted RBP13.05□□□□□ -0.32
GTF3C1-201ENST00000356183 UACAQ9BZF9 1416 aa13.04□□□□□ -0.32
GTF3C1-201ENST00000356183 MINK1Q8N4C8 1332 aaPredicted RBP13.04□□□□□ -0.32
GTF3C1-201ENST00000356183 RNF187Q5TA31 235 aaPredicted RBP13.04□□□□□ -0.32
GTF3C1-201ENST00000356183 RSPH4AQ5TD94 716 aa13.04□□□□□ -0.32
GTF3C1-201ENST00000356183 SLC26A8Q96RN1 970 aa13.04□□□□□ -0.32
GTF3C1-201ENST00000356183 CASQ1P31415 396 aa13.04□□□□□ -0.32
GTF3C1-201ENST00000356183 ATAD2BQ9ULI0 1458 aa13.04□□□□□ -0.32
GTF3C1-201ENST00000356183 WWC2Q6AWC2 1192 aa13.04□□□□□ -0.32
GTF3C1-201ENST00000356183 PIP4K2AP48426 406 aaPredicted RBP13.04□□□□□ -0.32
GTF3C1-201ENST00000356183 SART3Q15020 963 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms