RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 POLKQ9UBT6 870 aa23.08■■□□□ 1.28
NPAS3-202ENST00000356141 TSR2Q969E8 191 aaKnown RBP23.07■■□□□ 1.28
NPAS3-202ENST00000356141 ACEP12821 1306 aa23.07■■□□□ 1.28
NPAS3-202ENST00000356141 FRAT1Q92837 279 aaPredicted RBP23.06■■□□□ 1.28
NPAS3-202ENST00000356141 PLEKHG1Q9ULL1 1385 aa23.06■■□□□ 1.28
NPAS3-202ENST00000356141 DIAPH1O60610 1272 aaKnown RBP23.06■■□□□ 1.28
NPAS3-202ENST00000356141 C14orf37Q86TY3 774 aa23.06■■□□□ 1.28
NPAS3-202ENST00000356141 LAS1LQ9Y4W2 734 aaKnown RBP23.04■■□□□ 1.28
NPAS3-202ENST00000356141 RIMS1Q86UR5 1692 aaKnown RBP23.04■■□□□ 1.28
NPAS3-202ENST00000356141 NLRP1Q9C000 1473 aa23.04■■□□□ 1.28
NPAS3-202ENST00000356141 COG3Q96JB2 828 aa23.04■■□□□ 1.28
NPAS3-202ENST00000356141 SHPRHQ149N8 1683 aa23.03■■□□□ 1.28
NPAS3-202ENST00000356141 THUMPD2Q9BTF0 503 aaKnown RBP23.03■■□□□ 1.28
NPAS3-202ENST00000356141 NGDNQ8NEJ9 315 aaKnown RBP23.03■■□□□ 1.28
NPAS3-202ENST00000356141 RBM19Q9Y4C8 960 aaKnown RBP23.03■■□□□ 1.28
NPAS3-202ENST00000356141 CPS1P31327 1500 aa23.02■■□□□ 1.28
NPAS3-202ENST00000356141 MAPK8IP3Q9UPT6 1336 aa23.02■■□□□ 1.28
NPAS3-202ENST00000356141 NINLQ9Y2I6 1382 aa23.02■■□□□ 1.28
NPAS3-202ENST00000356141 PAK3O75914 559 aaPredicted RBP23.01■■□□□ 1.27
NPAS3-202ENST00000356141 TNNQ9UQP3 1299 aa23.01■■□□□ 1.27
NPAS3-202ENST00000356141 NSD2O96028 1365 aa23.01■■□□□ 1.27
NPAS3-202ENST00000356141 PRKAR2BP31323 418 aa23■■□□□ 1.27
NPAS3-202ENST00000356141 CANXP27824 592 aaKnown RBP23■■□□□ 1.27
NPAS3-202ENST00000356141 DLC1Q96QB1 1528 aa23■■□□□ 1.27
NPAS3-202ENST00000356141 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.99■■□□□ 1.27
NPAS3-202ENST00000356141 ZBTB7CA1YPR0 619 aa22.99■■□□□ 1.27
NPAS3-202ENST00000356141 E9PSI1 815 aa22.99■■□□□ 1.27
NPAS3-202ENST00000356141 CLUAP1Q96AJ1 413 aa22.98■■□□□ 1.27
NPAS3-202ENST00000356141 PHACTR3Q96KR7 559 aa22.98■■□□□ 1.27
NPAS3-202ENST00000356141 RIPK4P57078 832 aa22.98■■□□□ 1.27
NPAS3-202ENST00000356141 ERICH6BQ5W0A0 696 aa22.98■■□□□ 1.27
NPAS3-202ENST00000356141 XPCQ01831 940 aaPredicted RBP22.97■■□□□ 1.27
NPAS3-202ENST00000356141 TBX22Q9Y458 520 aa22.96■■□□□ 1.27
NPAS3-202ENST00000356141 ATP7BP35670 1465 aa22.96■■□□□ 1.27
NPAS3-202ENST00000356141 ANKLE2Q86XL3 938 aa22.96■■□□□ 1.27
NPAS3-202ENST00000356141 TMPOP42166 694 aaKnown RBP22.95■■□□□ 1.27
NPAS3-202ENST00000356141 PANK1Q8TE04 598 aa22.95■■□□□ 1.26
NPAS3-202ENST00000356141 FAM135BQ49AJ0 1406 aa22.95■■□□□ 1.26
NPAS3-202ENST00000356141 TTC21BQ7Z4L5 1316 aa22.94■■□□□ 1.26
NPAS3-202ENST00000356141 AEBP1Q8IUX7 1158 aa22.94■■□□□ 1.26
NPAS3-202ENST00000356141 PLEKHF1Q96S99 279 aa22.94■■□□□ 1.26
NPAS3-202ENST00000356141 CPSF1Q10570 1443 aaKnown RBP22.93■■□□□ 1.26
NPAS3-202ENST00000356141 USP32Q8NFA0 1604 aa22.93■■□□□ 1.26
NPAS3-202ENST00000356141 NKTRP30414 1462 aaKnown RBP22.93■■□□□ 1.26
NPAS3-202ENST00000356141 INSRP06213 1382 aa22.93■■□□□ 1.26
NPAS3-202ENST00000356141 TCERG1O14776 1098 aaKnown RBP22.92■■□□□ 1.26
NPAS3-202ENST00000356141 DCTN1Q14203 1278 aa22.92■■□□□ 1.26
NPAS3-202ENST00000356141 HSP90AB2PQ58FF8 381 aa22.92■■□□□ 1.26
NPAS3-202ENST00000356141 ELL2O00472 640 aaPredicted RBP22.92■■□□□ 1.26
NPAS3-202ENST00000356141 TECPR2O15040 1411 aa22.92■■□□□ 1.26
NPAS3-202ENST00000356141 EDC4Q6P2E9 1401 aaKnown RBP22.92■■□□□ 1.26
NPAS3-202ENST00000356141 TRMT2AQ8IZ69 625 aaKnown RBP22.91■■□□□ 1.26
NPAS3-202ENST00000356141 TRIM35Q9UPQ4 493 aa22.91■■□□□ 1.26
NPAS3-202ENST00000356141 FAM83GA6ND36 823 aa22.9■■□□□ 1.26
NPAS3-202ENST00000356141 COG6Q9Y2V7 657 aa22.9■■□□□ 1.26
NPAS3-202ENST00000356141 LTV1Q96GA3 475 aaPredicted RBP22.9■■□□□ 1.26
NPAS3-202ENST00000356141 LMOD2Q6P5Q4 547 aa22.9■■□□□ 1.26
NPAS3-202ENST00000356141 HSPA2P54652 639 aa22.89■■□□□ 1.26
NPAS3-202ENST00000356141 MAP2P11137 1827 aaKnown RBP22.89■■□□□ 1.25
NPAS3-202ENST00000356141 CEP170BQ9Y4F5 1589 aaPredicted RBP22.88■■□□□ 1.25
NPAS3-202ENST00000356141 EXOSC9Q06265 439 aaKnown RBP22.88■■□□□ 1.25
NPAS3-202ENST00000356141 COL3A1P02461 1466 aaPredicted RBP22.87■■□□□ 1.25
NPAS3-202ENST00000356141 KIF20BQ96Q89 1820 aa22.87■■□□□ 1.25
NPAS3-202ENST00000356141 ARHGAP23Q9P227 1491 aa22.87■■□□□ 1.25
NPAS3-202ENST00000356141 NLRP6P59044 892 aa22.87■■□□□ 1.25
NPAS3-202ENST00000356141 ZNF692Q9BU19 519 aaPredicted RBP22.87■■□□□ 1.25
NPAS3-202ENST00000356141 MED14O60244 1454 aa22.87■■□□□ 1.25
NPAS3-202ENST00000356141 SIRT1Q96EB6 747 aa22.86■■□□□ 1.25
NPAS3-202ENST00000356141 RSPH6AQ9H0K4 717 aa22.86■■□□□ 1.25
NPAS3-202ENST00000356141 SLIT1O75093 1534 aa22.86■■□□□ 1.25
NPAS3-202ENST00000356141 ESCO1Q5FWF5 840 aa22.86■■□□□ 1.25
NPAS3-202ENST00000356141 RGPD8O14715 1765 aaPredicted RBP22.85■■□□□ 1.25
NPAS3-202ENST00000356141 KDM4FA0A1W2PPD8 638 aa22.85■■□□□ 1.25
NPAS3-202ENST00000356141 IL13P35225 146 aa22.85■■□□□ 1.25
NPAS3-202ENST00000356141 SULT6B1Q6IMI4 303 aa22.85■■□□□ 1.25
NPAS3-202ENST00000356141 IQSEC2Q5JU85 1478 aa22.85■■□□□ 1.25
NPAS3-202ENST00000356141 NEFMP07197 916 aa22.85■■□□□ 1.25
NPAS3-202ENST00000356141 CDC42BPGQ6DT37 1551 aa22.84■■□□□ 1.25
NPAS3-202ENST00000356141 FANCIQ9NVI1 1328 aa22.84■■□□□ 1.25
NPAS3-202ENST00000356141 RARSP54136 660 aaKnown RBP22.82■■□□□ 1.24
NPAS3-202ENST00000356141 EIF4A2Q14240 407 aaKnown RBP22.82■■□□□ 1.24
NPAS3-202ENST00000356141 ABTB2Q8N961 1025 aa22.82■■□□□ 1.24
NPAS3-202ENST00000356141 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.82■■□□□ 1.24
NPAS3-202ENST00000356141 RTN4Q9NQC3 1192 aaKnown RBP22.82■■□□□ 1.24
NPAS3-202ENST00000356141 NCBP3Q53F19 620 aaKnown RBP22.82■■□□□ 1.24
NPAS3-202ENST00000356141 PLEKHG3A1L390 1219 aa22.81■■□□□ 1.24
NPAS3-202ENST00000356141 RLBP1P12271 317 aa22.81■■□□□ 1.24
NPAS3-202ENST00000356141 USP6P35125 1406 aa22.81■■□□□ 1.24
NPAS3-202ENST00000356141 ORAI2Q96SN7 254 aa22.81■■□□□ 1.24
NPAS3-202ENST00000356141 KNDC1Q76NI1 1749 aa22.8■■□□□ 1.24
NPAS3-202ENST00000356141 WDR63Q8IWG1 891 aa22.8■■□□□ 1.24
NPAS3-202ENST00000356141 PHF23Q9BUL5 403 aaPredicted RBP22.8■■□□□ 1.24
NPAS3-202ENST00000356141 AMPHP49418 695 aa22.79■■□□□ 1.24
NPAS3-202ENST00000356141 MYH16Q9H6N6 1097 aa22.79■■□□□ 1.24
NPAS3-202ENST00000356141 PNPLA6Q8IY17 1366 aa22.79■■□□□ 1.24
NPAS3-202ENST00000356141 FOXO3O43524 673 aa22.79■■□□□ 1.24
NPAS3-202ENST00000356141 FCHSD2O94868 740 aa22.79■■□□□ 1.24
NPAS3-202ENST00000356141 LRRC7Q96NW7 1537 aa22.79■■□□□ 1.24
NPAS3-202ENST00000356141 MAP3K19Q56UN5 1328 aa22.78■■□□□ 1.24
NPAS3-202ENST00000356141 DDX17Q92841 729 aaKnown RBP22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms