RNA–Protein interactions for RNA: ENST00000355683.9

STRN3-201, Transcript of striatin 3, humanhuman

TSL 1 (best) BASIC

Gene STRN3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-201ENST00000355683 TRAK2O60296 914 aa18.83■□□□□ 0.61
STRN3-201ENST00000355683 PARD3Q8TEW0 1356 aa18.82■□□□□ 0.6
STRN3-201ENST00000355683 SPATA31E1Q6ZUB1 1445 aa18.82■□□□□ 0.6
STRN3-201ENST00000355683 PRAG1Q86YV5 1406 aa18.82■□□□□ 0.6
STRN3-201ENST00000355683 AEBP2Q6ZN18 517 aaPredicted RBP18.82■□□□□ 0.6
STRN3-201ENST00000355683 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.82■□□□□ 0.6
STRN3-201ENST00000355683 CALD1Q05682 793 aaKnown RBP18.81■□□□□ 0.6
STRN3-201ENST00000355683 TSPYL4Q9UJ04 414 aa18.81■□□□□ 0.6
STRN3-201ENST00000355683 NOS1P29475 1434 aa18.81■□□□□ 0.6
STRN3-201ENST00000355683 AIMP1Q12904 312 aaKnown RBP18.8■□□□□ 0.6
STRN3-201ENST00000355683 SLC4A2P04920 1241 aa18.8■□□□□ 0.6
STRN3-201ENST00000355683 CHMP5Q9NZZ3 219 aa18.8■□□□□ 0.6
STRN3-201ENST00000355683 FOSBP53539 338 aa18.79■□□□□ 0.6
STRN3-201ENST00000355683 TSPYL6Q8N831 410 aa18.79■□□□□ 0.6
STRN3-201ENST00000355683 EXOC6BQ9Y2D4 811 aa18.79■□□□□ 0.6
STRN3-201ENST00000355683 THEMISQ8N1K5 641 aaPredicted RBP18.78■□□□□ 0.6
STRN3-201ENST00000355683 CFAP65Q6ZU64 1925 aaKnown RBP18.78■□□□□ 0.6
STRN3-201ENST00000355683 PANK2Q9BZ23 570 aa18.78■□□□□ 0.6
STRN3-201ENST00000355683 IL1RAPL2Q9NP60 686 aa18.78■□□□□ 0.6
STRN3-201ENST00000355683 SHROOM2Q13796 1616 aa18.78■□□□□ 0.6
STRN3-201ENST00000355683 NLRP6P59044 892 aa18.78■□□□□ 0.6
STRN3-201ENST00000355683 USHBP1Q8N6Y0 703 aa18.78■□□□□ 0.6
STRN3-201ENST00000355683 YEATS2Q9ULM3 1422 aa18.78■□□□□ 0.6
STRN3-201ENST00000355683 GPRASP1Q5JY77 1395 aa18.77■□□□□ 0.6
STRN3-201ENST00000355683 MBD5Q9P267 1494 aa18.77■□□□□ 0.6
STRN3-201ENST00000355683 C16orf71Q8IYS4 520 aaPredicted RBP18.77■□□□□ 0.59
STRN3-201ENST00000355683 CSB-PGBD3P0DP91 1061 aa18.76■□□□□ 0.59
STRN3-201ENST00000355683 ATAD2Q6PL18 1390 aa18.76■□□□□ 0.59
STRN3-201ENST00000355683 DUOX2Q9NRD8 1548 aa18.76■□□□□ 0.59
STRN3-201ENST00000355683 PHACTR3Q96KR7 559 aa18.75■□□□□ 0.59
STRN3-201ENST00000355683 MYO5CQ9NQX4 1742 aa18.75■□□□□ 0.59
STRN3-201ENST00000355683 NEO1Q92859 1461 aa18.75■□□□□ 0.59
STRN3-201ENST00000355683 CAVIN1Q6NZI2 390 aaKnown RBP18.74■□□□□ 0.59
STRN3-201ENST00000355683 LRPPRCP42704 1394 aaKnown RBP18.74■□□□□ 0.59
STRN3-201ENST00000355683 DNMT1P26358 1616 aaKnown RBP18.74■□□□□ 0.59
STRN3-201ENST00000355683 CHD1LQ86WJ1 897 aa18.74■□□□□ 0.59
STRN3-201ENST00000355683 AEBP1Q8IUX7 1158 aa18.74■□□□□ 0.59
STRN3-201ENST00000355683 RSPH6AQ9H0K4 717 aa18.73■□□□□ 0.59
STRN3-201ENST00000355683 RALGAPBQ86X10 1494 aa18.73■□□□□ 0.59
STRN3-201ENST00000355683 KIAA1211Q6ZU35 1233 aa18.73■□□□□ 0.59
STRN3-201ENST00000355683 RTEL1-TNFRSF6BF6WH68 1400 aa18.72■□□□□ 0.59
STRN3-201ENST00000355683 KIF16BQ96L93 1317 aa18.72■□□□□ 0.59
STRN3-201ENST00000355683 ANXA1P04083 346 aa18.72■□□□□ 0.59
STRN3-201ENST00000355683 NEK4P51957 841 aa18.72■□□□□ 0.59
STRN3-201ENST00000355683 GNAI1P63096 354 aa18.72■□□□□ 0.59
STRN3-201ENST00000355683 CCDC27Q2M243 656 aa18.72■□□□□ 0.59
STRN3-201ENST00000355683 CHMP4BQ9H444 224 aaKnown RBP18.72■□□□□ 0.59
STRN3-201ENST00000355683 FYB1O15117 783 aa18.72■□□□□ 0.59
STRN3-201ENST00000355683 PKNOX2Q96KN3 472 aa18.72■□□□□ 0.59
STRN3-201ENST00000355683 UPF3BQ9BZI7 483 aaKnown RBP18.72■□□□□ 0.59
STRN3-201ENST00000355683 SAMD9LQ8IVG5 1584 aa18.72■□□□□ 0.59
STRN3-201ENST00000355683 ATP7AQ04656 1500 aa18.72■□□□□ 0.59
STRN3-201ENST00000355683 KDM4AO75164 1064 aa18.72■□□□□ 0.59
STRN3-201ENST00000355683 FBXW7Q969H0 707 aa18.72■□□□□ 0.59
STRN3-201ENST00000355683 NKTRP30414 1462 aaKnown RBP18.72■□□□□ 0.59
STRN3-201ENST00000355683 PRPF40AO75400 957 aaKnown RBP18.71■□□□□ 0.59
STRN3-201ENST00000355683 FAM135AQ9P2D6 1515 aa18.71■□□□□ 0.59
STRN3-201ENST00000355683 WDR63Q8IWG1 891 aa18.71■□□□□ 0.59
STRN3-201ENST00000355683 MCM4P33991 863 aa18.7■□□□□ 0.58
STRN3-201ENST00000355683 ARHGEF12Q9NZN5 1544 aa18.7■□□□□ 0.58
STRN3-201ENST00000355683 FAM13BQ9NYF5 915 aa18.7■□□□□ 0.58
STRN3-201ENST00000355683 SHANK2Q9UPX8 1470 aa18.7■□□□□ 0.58
STRN3-201ENST00000355683 GOLGA6L4A6NEF3 574 aa18.68■□□□□ 0.58
STRN3-201ENST00000355683 HMMRO75330 724 aa18.68■□□□□ 0.58
STRN3-201ENST00000355683 ANKLE2Q86XL3 938 aa18.68■□□□□ 0.58
STRN3-201ENST00000355683 DRC7Q8IY82 874 aa18.68■□□□□ 0.58
STRN3-201ENST00000355683 ST18O60284 1047 aa18.67■□□□□ 0.58
STRN3-201ENST00000355683 PPFIA3O75145 1194 aa18.67■□□□□ 0.58
STRN3-201ENST00000355683 RNF123Q5XPI4 1314 aa18.67■□□□□ 0.58
STRN3-201ENST00000355683 MCCP23508 829 aa18.67■□□□□ 0.58
STRN3-201ENST00000355683 STAC3Q96MF2 364 aa18.67■□□□□ 0.58
STRN3-201ENST00000355683 PPP6R1Q9UPN7 881 aa18.67■□□□□ 0.58
STRN3-201ENST00000355683 ATP10AO60312 1499 aa18.67■□□□□ 0.58
STRN3-201ENST00000355683 GDPD2Q9HCC8 539 aa18.66■□□□□ 0.58
STRN3-201ENST00000355683 FOXO3O43524 673 aa18.66■□□□□ 0.58
STRN3-201ENST00000355683 C8orf58Q8NAV2 365 aa18.66■□□□□ 0.58
STRN3-201ENST00000355683 API5Q9BZZ5 524 aaKnown RBP18.66■□□□□ 0.58
STRN3-201ENST00000355683 SURF6O75683 361 aaKnown RBP18.66■□□□□ 0.58
STRN3-201ENST00000355683 SSFA2P28290 1259 aa18.66■□□□□ 0.58
STRN3-201ENST00000355683 HSP90AB2PQ58FF8 381 aa18.66■□□□□ 0.58
STRN3-201ENST00000355683 NUDT16Q96DE0 195 aaKnown RBP18.66■□□□□ 0.58
STRN3-201ENST00000355683 CHAMP1Q96JM3 812 aa18.66■□□□□ 0.58
STRN3-201ENST00000355683 LMOD3Q0VAK6 560 aa18.65■□□□□ 0.58
STRN3-201ENST00000355683 TEFQ10587 303 aa18.65■□□□□ 0.58
STRN3-201ENST00000355683 ABTB2Q8N961 1025 aa18.65■□□□□ 0.58
STRN3-201ENST00000355683 SIL1Q9H173 461 aa18.65■□□□□ 0.58
STRN3-201ENST00000355683 C14orf93Q9H972 538 aaKnown RBP18.64■□□□□ 0.57
STRN3-201ENST00000355683 NUTM1Q86Y26 1132 aa18.64■□□□□ 0.57
STRN3-201ENST00000355683 OTUD7AQ8TE49 926 aaPredicted RBP18.64■□□□□ 0.57
STRN3-201ENST00000355683 DDX11L8A8MPP1 907 aa18.63■□□□□ 0.57
STRN3-201ENST00000355683 PREX2Q70Z35 1606 aa18.63■□□□□ 0.57
STRN3-201ENST00000355683 ZMYM3Q14202 1370 aa18.63■□□□□ 0.57
STRN3-201ENST00000355683 MBIPQ9NS73 344 aa18.63■□□□□ 0.57
STRN3-201ENST00000355683 C9orf78Q9NZ63 289 aaPredicted RBP18.63■□□□□ 0.57
STRN3-201ENST00000355683 SCAF11Q99590 1463 aaKnown RBP18.63■□□□□ 0.57
STRN3-201ENST00000355683 RBM10P98175 930 aaKnown RBP18.63■□□□□ 0.57
STRN3-201ENST00000355683 ZRSR1Q15695 479 aaKnown RBP18.63■□□□□ 0.57
STRN3-201ENST00000355683 JARID2Q92833 1246 aaPredicted RBP18.63■□□□□ 0.57
STRN3-201ENST00000355683 LRRIQ1Q96JM4 1722 aa18.63■□□□□ 0.57
STRN3-201ENST00000355683 ABCC1P33527 1531 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms