RNA–Protein interactions for RNA: ENST00000355485.6

VANGL1-202, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 8,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-202ENST00000355485 XRCC6P12956 609 aaKnown RBP eCLIP9.38□□□□□ -0.91
VANGL1-202ENST00000355485 GTF2A1P52655 376 aaPredicted RBP9.38□□□□□ -0.91
VANGL1-202ENST00000355485 TRMT1Q9NXH9 659 aaKnown RBP9.38□□□□□ -0.91
VANGL1-202ENST00000355485 CT47B1P0C2W7 299 aaPredicted RBP9.38□□□□□ -0.91
VANGL1-202ENST00000355485 EIF2S2P20042 333 aaKnown RBP9.37□□□□□ -0.91
VANGL1-202ENST00000355485 GRIPAP1Q4V328 841 aa9.37□□□□□ -0.91
VANGL1-202ENST00000355485 FILIP1Q7Z7B0 1213 aa9.37□□□□□ -0.91
VANGL1-202ENST00000355485 MYO6Q9UM54 1294 aa9.37□□□□□ -0.91
VANGL1-202ENST00000355485 KIAA0754O94854 1291 aa9.37□□□□□ -0.91
VANGL1-202ENST00000355485 ANKRD18AQ8IVF6 992 aa9.37□□□□□ -0.91
VANGL1-202ENST00000355485 TNPO1Q92973 898 aaKnown RBP9.37□□□□□ -0.91
VANGL1-202ENST00000355485 SDF4Q9BRK5 362 aa9.37□□□□□ -0.91
VANGL1-202ENST00000355485 TBC1D2Q9BYX2 928 aa9.37□□□□□ -0.91
VANGL1-202ENST00000355485 TNMDQ9H2S6 317 aa9.37□□□□□ -0.91
VANGL1-202ENST00000355485 OLFM4Q6UX06 510 aa9.37□□□□□ -0.91
VANGL1-202ENST00000355485 ZNF428Q96B54 188 aa9.37□□□□□ -0.91
VANGL1-202ENST00000355485 NOP2P46087 812 aaKnown RBP9.37□□□□□ -0.91
VANGL1-202ENST00000355485 USP25Q9UHP3 1055 aa9.37□□□□□ -0.91
VANGL1-202ENST00000355485 ZKSCAN1P17029 563 aaPredicted RBP9.36□□□□□ -0.91
VANGL1-202ENST00000355485 IRX3P78415 501 aaPredicted RBP9.36□□□□□ -0.91
VANGL1-202ENST00000355485 CALCOCO1Q9P1Z2 691 aa9.36□□□□□ -0.91
VANGL1-202ENST00000355485 NOB1Q9ULX3 412 aaKnown RBP9.36□□□□□ -0.91
VANGL1-202ENST00000355485 NUTM2FA1L443 756 aa9.36□□□□□ -0.91
VANGL1-202ENST00000355485 CLCN1P35523 988 aa9.36□□□□□ -0.91
VANGL1-202ENST00000355485 TRIM29Q14134 588 aa9.36□□□□□ -0.91
VANGL1-202ENST00000355485 RUNDC1Q96C34 613 aa9.35□□□□□ -0.91
VANGL1-202ENST00000355485 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.35□□□□□ -0.91
VANGL1-202ENST00000355485 HOOK1Q9UJC3 728 aaKnown RBP9.35□□□□□ -0.91
VANGL1-202ENST00000355485 ZFYVE27Q5T4F4 411 aa9.35□□□□□ -0.91
VANGL1-202ENST00000355485 SERPINC1P01008 464 aa9.35□□□□□ -0.91
VANGL1-202ENST00000355485 IFIT2P09913 472 aaKnown RBP9.35□□□□□ -0.91
VANGL1-202ENST00000355485 CUX2O14529 1486 aa9.35□□□□□ -0.91
VANGL1-202ENST00000355485 CCDC192P0DO97 292 aa9.35□□□□□ -0.91
VANGL1-202ENST00000355485 GGT6Q6P531 493 aa9.35□□□□□ -0.91
VANGL1-202ENST00000355485 PPP1R1BQ9UD71 204 aaPredicted RBP9.35□□□□□ -0.91
VANGL1-202ENST00000355485 ATAD2BQ9ULI0 1458 aa9.35□□□□□ -0.91
VANGL1-202ENST00000355485 EPS15P42566 896 aa9.35□□□□□ -0.91
VANGL1-202ENST00000355485 RUFY2Q8WXA3 655 aa9.35□□□□□ -0.91
VANGL1-202ENST00000355485 EXOSC9Q06265 439 aaKnown RBP9.35□□□□□ -0.91
VANGL1-202ENST00000355485 TSR2Q969E8 191 aaKnown RBP9.35□□□□□ -0.91
VANGL1-202ENST00000355485 EIF3AQ14152 1382 aaKnown RBP9.35□□□□□ -0.91
VANGL1-202ENST00000355485 C16orf45Q96MC5 204 aaPredicted RBP9.34□□□□□ -0.91
VANGL1-202ENST00000355485 NAT10Q9H0A0 1025 aaKnown RBP9.34□□□□□ -0.91
VANGL1-202ENST00000355485 RAPGEF2Q9Y4G8 1499 aa9.34□□□□□ -0.91
VANGL1-202ENST00000355485 FHOD3Q2V2M9 1422 aa9.34□□□□□ -0.91
VANGL1-202ENST00000355485 NEXNQ0ZGT2 675 aa9.34□□□□□ -0.91
VANGL1-202ENST00000355485 RABEP1Q15276 862 aa9.34□□□□□ -0.91
VANGL1-202ENST00000355485 RSPH4AQ5TD94 716 aa9.34□□□□□ -0.91
VANGL1-202ENST00000355485 CCDC18Q5T9S5 1454 aa9.34□□□□□ -0.91
VANGL1-202ENST00000355485 TMCO3Q6UWJ1 677 aa9.34□□□□□ -0.91
VANGL1-202ENST00000355485 HMOX1P09601 288 aa9.34□□□□□ -0.91
VANGL1-202ENST00000355485 HSP90AB2PQ58FF8 381 aa9.34□□□□□ -0.91
VANGL1-202ENST00000355485 NEBLO76041 1014 aa9.34□□□□□ -0.91
VANGL1-202ENST00000355485 TIGD1Q96MW7 591 aa9.34□□□□□ -0.91
VANGL1-202ENST00000355485 CPLX1O14810 134 aa9.33□□□□□ -0.92
VANGL1-202ENST00000355485 GDPD2Q9HCC8 539 aa9.33□□□□□ -0.92
VANGL1-202ENST00000355485 CPLX2Q6PUV4 134 aaKnown RBP9.33□□□□□ -0.92
VANGL1-202ENST00000355485 HSP90AB4PQ58FF6 505 aa9.33□□□□□ -0.92
VANGL1-202ENST00000355485 FEZ1Q99689 392 aa9.33□□□□□ -0.92
VANGL1-202ENST00000355485 LARP6Q9BRS8 491 aaKnown RBP9.33□□□□□ -0.92
VANGL1-202ENST00000355485 NFXL1Q6ZNB6 911 aa9.33□□□□□ -0.92
VANGL1-202ENST00000355485 DYNC1I1O14576 645 aa9.33□□□□□ -0.92
VANGL1-202ENST00000355485 ATP2B1P20020 1258 aa9.32□□□□□ -0.92
VANGL1-202ENST00000355485 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.32□□□□□ -0.92
VANGL1-202ENST00000355485 V9GYY5 206 aaPredicted RBP9.32□□□□□ -0.92
VANGL1-202ENST00000355485 URI1O94763 535 aaPredicted RBP9.32□□□□□ -0.92
VANGL1-202ENST00000355485 ANKRD30AQ9BXX3 1397 aa9.32□□□□□ -0.92
VANGL1-202ENST00000355485 LMOD3Q0VAK6 560 aa9.32□□□□□ -0.92
VANGL1-202ENST00000355485 LMAN1P49257 510 aa9.32□□□□□ -0.92
VANGL1-202ENST00000355485 DCTN1Q14203 1278 aa9.32□□□□□ -0.92
VANGL1-202ENST00000355485 PTPN14Q15678 1187 aa9.31□□□□□ -0.92
VANGL1-202ENST00000355485 RNF187Q5TA31 235 aaPredicted RBP9.31□□□□□ -0.92
VANGL1-202ENST00000355485 STAC3Q96MF2 364 aa9.31□□□□□ -0.92
VANGL1-202ENST00000355485 BRD4O60885 1362 aaPredicted RBP9.31□□□□□ -0.92
VANGL1-202ENST00000355485 UBXN4Q92575 508 aa9.31□□□□□ -0.92
VANGL1-202ENST00000355485 API5Q9BZZ5 524 aaKnown RBP9.31□□□□□ -0.92
VANGL1-202ENST00000355485 CADPSQ9ULU8 1353 aa9.31□□□□□ -0.92
VANGL1-202ENST00000355485 EIF3JO75822 258 aaKnown RBP9.31□□□□□ -0.92
VANGL1-202ENST00000355485 ADCY5O95622 1261 aa9.31□□□□□ -0.92
VANGL1-202ENST00000355485 PPP2R1AP30153 589 aa9.3□□□□□ -0.92
VANGL1-202ENST00000355485 ZSCAN23Q3MJ62 389 aa9.3□□□□□ -0.92
VANGL1-202ENST00000355485 DNAJC2Q99543 621 aaKnown RBP9.3□□□□□ -0.92
VANGL1-202ENST00000355485 CCP110O43303 1012 aa9.3□□□□□ -0.92
VANGL1-202ENST00000355485 KINO60870 393 aaKnown RBP9.3□□□□□ -0.92
VANGL1-202ENST00000355485 NBPF1Q3BBV0 1214 aa9.3□□□□□ -0.92
VANGL1-202ENST00000355485 PNISRQ8TF01 805 aaKnown RBP9.3□□□□□ -0.92
VANGL1-202ENST00000355485 NUP62CLQ9H1M0 184 aa9.3□□□□□ -0.92
VANGL1-202ENST00000355485 ERICH2A1L162 156 aa9.3□□□□□ -0.92
VANGL1-202ENST00000355485 CHD1LQ86WJ1 897 aa9.3□□□□□ -0.92
VANGL1-202ENST00000355485 LRRCC1Q9C099 1032 aa9.3□□□□□ -0.92
VANGL1-202ENST00000355485 CCDC94Q9BW85 323 aaPredicted RBP9.3□□□□□ -0.92
VANGL1-202ENST00000355485 CASQ1P31415 396 aa9.29□□□□□ -0.92
VANGL1-202ENST00000355485 IKQ13123 557 aaPredicted RBP9.29□□□□□ -0.92
VANGL1-202ENST00000355485 SAMD1Q6SPF0 538 aaPredicted RBP9.29□□□□□ -0.92
VANGL1-202ENST00000355485 DNAJC5BQ9UF47 199 aa9.29□□□□□ -0.92
VANGL1-202ENST00000355485 PDS5BQ9NTI5 1447 aa9.29□□□□□ -0.92
VANGL1-202ENST00000355485 FKBP5Q13451 457 aaPredicted RBP9.29□□□□□ -0.92
VANGL1-202ENST00000355485 RNF20Q5VTR2 975 aa9.29□□□□□ -0.92
VANGL1-202ENST00000355485 DIAPH1O60610 1272 aaKnown RBP9.29□□□□□ -0.92
VANGL1-202ENST00000355485 CERS3Q8IU89 383 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms