RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 TTC37Q6PGP7 1564 aa17.72■□□□□ 0.43
RLIM-202ENST00000349225 FGD1P98174 961 aa17.72■□□□□ 0.43
RLIM-202ENST00000349225 ZBTB40Q9NUA8 1239 aa17.72■□□□□ 0.43
RLIM-202ENST00000349225 GPT2Q8TD30 523 aa17.72■□□□□ 0.43
RLIM-202ENST00000349225 TSC1Q92574 1164 aa17.72■□□□□ 0.43
RLIM-202ENST00000349225 CFAP74Q9C0B2 1584 aa17.72■□□□□ 0.43
RLIM-202ENST00000349225 TMEM57Q8N5G2 664 aa17.71■□□□□ 0.43
RLIM-202ENST00000349225 SSH1Q8WYL5 1049 aa17.71■□□□□ 0.43
RLIM-202ENST00000349225 CARMIL2Q6F5E8 1435 aa17.71■□□□□ 0.43
RLIM-202ENST00000349225 CYP2E1P05181 493 aaPredicted RBP17.71■□□□□ 0.43
RLIM-202ENST00000349225 CCDC27Q2M243 656 aa17.71■□□□□ 0.43
RLIM-202ENST00000349225 TBC1D9Q6ZT07 1266 aa17.7■□□□□ 0.42
RLIM-202ENST00000349225 DUOX2Q9NRD8 1548 aa17.7■□□□□ 0.42
RLIM-202ENST00000349225 NCLP19338 710 aaKnown RBP17.7■□□□□ 0.42
RLIM-202ENST00000349225 ZNF710Q8N1W2 664 aa17.7■□□□□ 0.42
RLIM-202ENST00000349225 CCDC94Q9BW85 323 aaPredicted RBP17.7■□□□□ 0.42
RLIM-202ENST00000349225 SMC4Q9NTJ3 1288 aa17.7■□□□□ 0.42
RLIM-202ENST00000349225 NSFL1CQ9UNZ2 370 aaKnown RBP17.7■□□□□ 0.42
RLIM-202ENST00000349225 SASS6Q6UVJ0 657 aa17.69■□□□□ 0.42
RLIM-202ENST00000349225 CHD1LQ86WJ1 897 aa17.69■□□□□ 0.42
RLIM-202ENST00000349225 PREX2Q70Z35 1606 aa17.69■□□□□ 0.42
RLIM-202ENST00000349225 GOLGA6L22H0YM25 854 aa17.69■□□□□ 0.42
RLIM-202ENST00000349225 BMP2KLQ5H9B9 411 aa17.69■□□□□ 0.42
RLIM-202ENST00000349225 DDX19BQ9UMR2 479 aa17.69■□□□□ 0.42
RLIM-202ENST00000349225 MAST1Q9Y2H9 1570 aa17.69■□□□□ 0.42
RLIM-202ENST00000349225 EXOSC9Q06265 439 aaKnown RBP17.68■□□□□ 0.42
RLIM-202ENST00000349225 NOB1Q9ULX3 412 aaKnown RBP17.68■□□□□ 0.42
RLIM-202ENST00000349225 UTP14CQ5TAP6 766 aaKnown RBP17.68■□□□□ 0.42
RLIM-202ENST00000349225 ATF7IPQ6VMQ6 1270 aa17.68■□□□□ 0.42
RLIM-202ENST00000349225 ZBTB7CA1YPR0 619 aa17.67■□□□□ 0.42
RLIM-202ENST00000349225 MTERF4Q7Z6M4 381 aaKnown RBP17.67■□□□□ 0.42
RLIM-202ENST00000349225 TMEM63CQ9P1W3 806 aa17.66■□□□□ 0.42
RLIM-202ENST00000349225 ZNF518AQ6AHZ1 1483 aa17.66■□□□□ 0.42
RLIM-202ENST00000349225 NOS1P29475 1434 aa17.66■□□□□ 0.42
RLIM-202ENST00000349225 ZCCHC11Q5TAX3 1644 aaKnown RBP17.65■□□□□ 0.42
RLIM-202ENST00000349225 ZDHHC9Q9Y397 364 aa17.65■□□□□ 0.42
RLIM-202ENST00000349225 NSD3Q9BZ95 1437 aa17.65■□□□□ 0.42
RLIM-202ENST00000349225 ADGRB2O60241 1585 aa17.65■□□□□ 0.42
RLIM-202ENST00000349225 MTHFSP49914 203 aa17.64■□□□□ 0.42
RLIM-202ENST00000349225 CSPP1Q1MSJ5 1256 aa17.64■□□□□ 0.42
RLIM-202ENST00000349225 MORC1Q86VD1 984 aa17.64■□□□□ 0.41
RLIM-202ENST00000349225 JPH4Q96JJ6 628 aa17.64■□□□□ 0.41
RLIM-202ENST00000349225 CLTCL1P53675 1640 aa17.64■□□□□ 0.41
RLIM-202ENST00000349225 PRPF40AO75400 957 aaKnown RBP17.64■□□□□ 0.41
RLIM-202ENST00000349225 KIF16BQ96L93 1317 aa17.64■□□□□ 0.41
RLIM-202ENST00000349225 CD109Q6YHK3 1445 aa17.63■□□□□ 0.41
RLIM-202ENST00000349225 SYCE3A1L190 88 aa17.63■□□□□ 0.41
RLIM-202ENST00000349225 FAM177BA6PVY3 158 aa17.63■□□□□ 0.41
RLIM-202ENST00000349225 MCM5P33992 734 aa17.63■□□□□ 0.41
RLIM-202ENST00000349225 CFAP70Q5T0N1 1121 aa17.63■□□□□ 0.41
RLIM-202ENST00000349225 CHMP7Q8WUX9 453 aaPredicted RBP17.63■□□□□ 0.41
RLIM-202ENST00000349225 ATP2B3Q16720 1220 aa17.62■□□□□ 0.41
RLIM-202ENST00000349225 PPIP5K1Q6PFW1 1433 aa17.62■□□□□ 0.41
RLIM-202ENST00000349225 ZGPATQ8N5A5 531 aaKnown RBP17.62■□□□□ 0.41
RLIM-202ENST00000349225 MYRIPQ8NFW9 859 aa17.61■□□□□ 0.41
RLIM-202ENST00000349225 CBX1P83916 185 aa17.61■□□□□ 0.41
RLIM-202ENST00000349225 ANKRD45Q5TZF3 282 aa17.61■□□□□ 0.41
RLIM-202ENST00000349225 LRSAM1Q6UWE0 723 aa17.61■□□□□ 0.41
RLIM-202ENST00000349225 RNF214Q8ND24 703 aa17.61■□□□□ 0.41
RLIM-202ENST00000349225 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.6■□□□□ 0.41
RLIM-202ENST00000349225 RSPH4AQ5TD94 716 aa17.6■□□□□ 0.41
RLIM-202ENST00000349225 CCDC39Q9UFE4 941 aa17.6■□□□□ 0.41
RLIM-202ENST00000349225 TRIM35Q9UPQ4 493 aa17.6■□□□□ 0.41
RLIM-202ENST00000349225 PTPRTO14522 1441 aa17.6■□□□□ 0.41
RLIM-202ENST00000349225 C1orf115Q9H7X2 142 aa17.6■□□□□ 0.41
RLIM-202ENST00000349225 MPNDQ8N594 471 aa17.59■□□□□ 0.41
RLIM-202ENST00000349225 SLC12A5Q9H2X9 1139 aa17.59■□□□□ 0.41
RLIM-202ENST00000349225 TRPM2O94759 1503 aa17.59■□□□□ 0.41
RLIM-202ENST00000349225 PPRC1Q5VV67 1664 aaKnown RBP17.59■□□□□ 0.41
RLIM-202ENST00000349225 KIAA1210Q9ULL0 1709 aa17.59■□□□□ 0.41
RLIM-202ENST00000349225 GSPT1P15170 499 aaKnown RBP17.59■□□□□ 0.41
RLIM-202ENST00000349225 ARAP3Q8WWN8 1544 aa17.58■□□□□ 0.41
RLIM-202ENST00000349225 SIRT2Q8IXJ6 389 aa17.58■□□□□ 0.41
RLIM-202ENST00000349225 ABCA6Q8N139 1617 aa17.58■□□□□ 0.4
RLIM-202ENST00000349225 CT47B1P0C2W7 299 aaPredicted RBP17.57■□□□□ 0.4
RLIM-202ENST00000349225 U2AF1L5P0DN76 240 aaPredicted RBP17.57■□□□□ 0.4
RLIM-202ENST00000349225 NUCB2P80303 420 aa17.57■□□□□ 0.4
RLIM-202ENST00000349225 U2AF1Q01081 240 aaKnown RBP eCLIP17.57■□□□□ 0.4
RLIM-202ENST00000349225 C17orf53Q8N3J3 647 aaPredicted RBP17.57■□□□□ 0.4
RLIM-202ENST00000349225 ZNF830Q96NB3 372 aaPredicted RBP17.56■□□□□ 0.4
RLIM-202ENST00000349225 PPP4R3BQ5MIZ7 849 aa17.56■□□□□ 0.4
RLIM-202ENST00000349225 PLEKHF1Q96S99 279 aa17.56■□□□□ 0.4
RLIM-202ENST00000349225 ADGRF5Q8IZF2 1346 aa17.55■□□□□ 0.4
RLIM-202ENST00000349225 GTF2E1P29083 439 aaPredicted RBP17.55■□□□□ 0.4
RLIM-202ENST00000349225 MED14O60244 1454 aa17.55■□□□□ 0.4
RLIM-202ENST00000349225 ARHGAP5Q13017 1502 aa17.54■□□□□ 0.4
RLIM-202ENST00000349225 GTF2F1P35269 517 aaKnown RBP eCLIP17.54■□□□□ 0.4
RLIM-202ENST00000349225 KIAA2012Q0VF49 1180 aa17.54■□□□□ 0.4
RLIM-202ENST00000349225 ZBTB7BO15156 539 aaPredicted RBP17.53■□□□□ 0.4
RLIM-202ENST00000349225 ADGRL1O94910 1474 aa17.53■□□□□ 0.4
RLIM-202ENST00000349225 MYO3AQ8NEV4 1616 aa17.53■□□□□ 0.4
RLIM-202ENST00000349225 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.53■□□□□ 0.4
RLIM-202ENST00000349225 RABEP1Q15276 862 aa17.53■□□□□ 0.4
RLIM-202ENST00000349225 NCBP3Q53F19 620 aaKnown RBP17.53■□□□□ 0.4
RLIM-202ENST00000349225 TMPOP42166 694 aaKnown RBP17.52■□□□□ 0.4
RLIM-202ENST00000349225 FOXD4L5Q5VV16 416 aaPredicted RBP17.52■□□□□ 0.4
RLIM-202ENST00000349225 FOXD4L4Q8WXT5 416 aaPredicted RBP17.52■□□□□ 0.4
RLIM-202ENST00000349225 CDC45O75419 566 aa17.52■□□□□ 0.4
RLIM-202ENST00000349225 USP26Q9BXU7 913 aa17.52■□□□□ 0.4
RLIM-202ENST00000349225 MAP3K4Q9Y6R4 1608 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 208.3 ms