RNA–Protein interactions for RNA: ENST00000345990.8

CSNK1G3-201, Transcript of casein kinase 1 gamma 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSNK1G3, Length 4,635 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-201ENST00000345990 DDRGK1Q96HY6 314 aa17.27■□□□□ 0.35
CSNK1G3-201ENST00000345990 ZMYM4Q5VZL5 1548 aa17.26■□□□□ 0.35
CSNK1G3-201ENST00000345990 HMGB2P26583 209 aaKnown RBP17.26■□□□□ 0.35
CSNK1G3-201ENST00000345990 DDX58O95786 925 aaKnown RBP17.26■□□□□ 0.35
CSNK1G3-201ENST00000345990 NCKAP5LQ9HCH0 1330 aa17.26■□□□□ 0.35
CSNK1G3-201ENST00000345990 AMER1Q5JTC6 1135 aaPredicted RBP17.26■□□□□ 0.35
CSNK1G3-201ENST00000345990 PIK3C2GO75747 1445 aa17.25■□□□□ 0.35
CSNK1G3-201ENST00000345990 RNF17Q9BXT8 1623 aaKnown RBP17.25■□□□□ 0.35
CSNK1G3-201ENST00000345990 ARHGEF40Q8TER5 1519 aa17.25■□□□□ 0.35
CSNK1G3-201ENST00000345990 FOXO3O43524 673 aa17.25■□□□□ 0.35
CSNK1G3-201ENST00000345990 ZC3H13Q5T200 1668 aaKnown RBP17.24■□□□□ 0.35
CSNK1G3-201ENST00000345990 PARD3Q8TEW0 1356 aa17.24■□□□□ 0.35
CSNK1G3-201ENST00000345990 SPHKAPQ2M3C7 1700 aa17.24■□□□□ 0.35
CSNK1G3-201ENST00000345990 DDX19BQ9UMR2 479 aa17.23■□□□□ 0.35
CSNK1G3-201ENST00000345990 BECN1Q14457 450 aa17.23■□□□□ 0.35
CSNK1G3-201ENST00000345990 NFE2L2Q16236 605 aa17.23■□□□□ 0.35
CSNK1G3-201ENST00000345990 AMOTQ4VCS5 1084 aa17.23■□□□□ 0.35
CSNK1G3-201ENST00000345990 B4GALNT3Q6L9W6 998 aa17.22■□□□□ 0.35
CSNK1G3-201ENST00000345990 CFAP65Q6ZU64 1925 aaKnown RBP17.22■□□□□ 0.35
CSNK1G3-201ENST00000345990 TOM1O60784 492 aa17.22■□□□□ 0.35
CSNK1G3-201ENST00000345990 RRS1Q15050 365 aaKnown RBP17.22■□□□□ 0.35
CSNK1G3-201ENST00000345990 NEXNQ0ZGT2 675 aa17.22■□□□□ 0.35
CSNK1G3-201ENST00000345990 FYB1O15117 783 aa17.21■□□□□ 0.35
CSNK1G3-201ENST00000345990 LTKP29376 864 aa17.21■□□□□ 0.35
CSNK1G3-201ENST00000345990 FAM135BQ49AJ0 1406 aa17.21■□□□□ 0.35
CSNK1G3-201ENST00000345990 TOM1L2Q6ZVM7 507 aa17.2■□□□□ 0.34
CSNK1G3-201ENST00000345990 KIDINS220Q9ULH0 1771 aa17.2■□□□□ 0.34
CSNK1G3-201ENST00000345990 POLR3AO14802 1390 aaPredicted RBP17.2■□□□□ 0.34
CSNK1G3-201ENST00000345990 EDC4Q6P2E9 1401 aaKnown RBP17.2■□□□□ 0.34
CSNK1G3-201ENST00000345990 A2ML1A8K2U0 1454 aa17.2■□□□□ 0.34
CSNK1G3-201ENST00000345990 SYNMO15061 1565 aa17.19■□□□□ 0.34
CSNK1G3-201ENST00000345990 NPHP4O75161 1426 aaPredicted RBP17.19■□□□□ 0.34
CSNK1G3-201ENST00000345990 MAP3K4Q9Y6R4 1608 aa17.19■□□□□ 0.34
CSNK1G3-201ENST00000345990 ABCA6Q8N139 1617 aa17.19■□□□□ 0.34
CSNK1G3-201ENST00000345990 DZIP1LQ8IYY4 767 aaKnown RBP17.19■□□□□ 0.34
CSNK1G3-201ENST00000345990 ZNF530Q6P9A1 599 aaPredicted RBP17.19■□□□□ 0.34
CSNK1G3-201ENST00000345990 PLEKHG3A1L390 1219 aa17.18■□□□□ 0.34
CSNK1G3-201ENST00000345990 TCERG1O14776 1098 aaKnown RBP17.18■□□□□ 0.34
CSNK1G3-201ENST00000345990 CLTCL1P53675 1640 aa17.18■□□□□ 0.34
CSNK1G3-201ENST00000345990 CCDC30Q5VVM6 783 aa17.18■□□□□ 0.34
CSNK1G3-201ENST00000345990 TMPOP42166 694 aaKnown RBP17.18■□□□□ 0.34
CSNK1G3-201ENST00000345990 SLC4A10Q6U841 1118 aa17.18■□□□□ 0.34
CSNK1G3-201ENST00000345990 RGS3P49796 1198 aa17.17■□□□□ 0.34
CSNK1G3-201ENST00000345990 CAMSAP1Q5T5Y3 1602 aa17.17■□□□□ 0.34
CSNK1G3-201ENST00000345990 ADGRB3O60242 1522 aa17.17■□□□□ 0.34
CSNK1G3-201ENST00000345990 HSPA2P54652 639 aa17.17■□□□□ 0.34
CSNK1G3-201ENST00000345990 ELL2O00472 640 aaPredicted RBP17.16■□□□□ 0.34
CSNK1G3-201ENST00000345990 CENPQQ7L2Z9 268 aaPredicted RBP17.16■□□□□ 0.34
CSNK1G3-201ENST00000345990 CLUAP1Q96AJ1 413 aa17.16■□□□□ 0.34
CSNK1G3-201ENST00000345990 A0A1W2PP64 1363 aa17.16■□□□□ 0.34
CSNK1G3-201ENST00000345990 XPCQ01831 940 aaPredicted RBP17.16■□□□□ 0.34
CSNK1G3-201ENST00000345990 GPATCH3Q96I76 525 aa17.16■□□□□ 0.34
CSNK1G3-201ENST00000345990 ZNF330Q9Y3S2 320 aaPredicted RBP17.16■□□□□ 0.34
CSNK1G3-201ENST00000345990 PER1O15534 1290 aaPredicted RBP17.15■□□□□ 0.34
CSNK1G3-201ENST00000345990 ZC3H6P61129 1189 aaKnown RBP17.14■□□□□ 0.34
CSNK1G3-201ENST00000345990 STRN4Q9NRL3 753 aa17.14■□□□□ 0.33
CSNK1G3-201ENST00000345990 GNAT3A8MTJ3 354 aa17.14■□□□□ 0.33
CSNK1G3-201ENST00000345990 PDE3AQ14432 1141 aa17.14■□□□□ 0.33
CSNK1G3-201ENST00000345990 EMILIN1Q9Y6C2 1016 aa17.14■□□□□ 0.33
CSNK1G3-201ENST00000345990 E9PCH4 1651 aa17.14■□□□□ 0.33
CSNK1G3-201ENST00000345990 KDM5AP29375 1690 aaKnown RBP17.14■□□□□ 0.33
CSNK1G3-201ENST00000345990 IL16Q14005 1332 aa17.12■□□□□ 0.33
CSNK1G3-201ENST00000345990 WWC1Q8IX03 1113 aa17.12■□□□□ 0.33
CSNK1G3-201ENST00000345990 INSRP06213 1382 aa17.12■□□□□ 0.33
CSNK1G3-201ENST00000345990 FLT4P35916 1363 aa17.12■□□□□ 0.33
CSNK1G3-201ENST00000345990 EIF2S2P20042 333 aaKnown RBP17.12■□□□□ 0.33
CSNK1G3-201ENST00000345990 TWISTNBQ3B726 338 aaPredicted RBP17.12■□□□□ 0.33
CSNK1G3-201ENST00000345990 IFT57Q9NWB7 429 aa17.12■□□□□ 0.33
CSNK1G3-201ENST00000345990 CEP152O94986 1710 aa17.12■□□□□ 0.33
CSNK1G3-201ENST00000345990 CCDC184Q52MB2 194 aa17.11■□□□□ 0.33
CSNK1G3-201ENST00000345990 FKBP5Q13451 457 aaPredicted RBP17.11■□□□□ 0.33
CSNK1G3-201ENST00000345990 PIP4K2BP78356 416 aa17.11■□□□□ 0.33
CSNK1G3-201ENST00000345990 TMX4Q9H1E5 349 aaPredicted RBP17.1■□□□□ 0.33
CSNK1G3-201ENST00000345990 PPRC1Q5VV67 1664 aaKnown RBP17.1■□□□□ 0.33
CSNK1G3-201ENST00000345990 SLFN5Q08AF3 891 aa17.1■□□□□ 0.33
CSNK1G3-201ENST00000345990 TAF7LQ5H9L4 462 aa17.1■□□□□ 0.33
CSNK1G3-201ENST00000345990 RBM33Q96EV2 1170 aaKnown RBP17.1■□□□□ 0.33
CSNK1G3-201ENST00000345990 CARD14Q9BXL6 1004 aa17.1■□□□□ 0.33
CSNK1G3-201ENST00000345990 HSP90B1P14625 803 aaKnown RBP17.09■□□□□ 0.33
CSNK1G3-201ENST00000345990 CABP4P57796 275 aa17.09■□□□□ 0.33
CSNK1G3-201ENST00000345990 EXOSC9Q06265 439 aaKnown RBP17.09■□□□□ 0.33
CSNK1G3-201ENST00000345990 BCL2L13Q9BXK5 485 aa17.09■□□□□ 0.33
CSNK1G3-201ENST00000345990 MCCP23508 829 aa17.09■□□□□ 0.33
CSNK1G3-201ENST00000345990 LAMC1P11047 1609 aa17.09■□□□□ 0.33
CSNK1G3-201ENST00000345990 METP08581 1390 aa17.09■□□□□ 0.33
CSNK1G3-201ENST00000345990 REREQ9P2R6 1566 aa17.08■□□□□ 0.32
CSNK1G3-201ENST00000345990 SETBP1Q9Y6X0 1596 aa17.08■□□□□ 0.32
CSNK1G3-201ENST00000345990 ATP7BP35670 1465 aa17.08■□□□□ 0.32
CSNK1G3-201ENST00000345990 HTATSF1O43719 755 aaKnown RBP17.08■□□□□ 0.32
CSNK1G3-201ENST00000345990 HSP90AB4PQ58FF6 505 aa17.08■□□□□ 0.32
CSNK1G3-201ENST00000345990 C9orf78Q9NZ63 289 aaPredicted RBP17.08■□□□□ 0.32
CSNK1G3-201ENST00000345990 CCDC27Q2M243 656 aa17.07■□□□□ 0.32
CSNK1G3-201ENST00000345990 LRRC59Q96AG4 307 aaKnown RBP17.07■□□□□ 0.32
CSNK1G3-201ENST00000345990 SYTL4Q96C24 671 aaPredicted RBP17.07■□□□□ 0.32
CSNK1G3-201ENST00000345990 ARHGEF10O15013 1369 aa17.07■□□□□ 0.32
CSNK1G3-201ENST00000345990 CRBNQ96SW2 442 aa17.07■□□□□ 0.32
CSNK1G3-201ENST00000345990 NEURL4Q96JN8 1562 aa17.07■□□□□ 0.32
CSNK1G3-201ENST00000345990 NCBP3Q53F19 620 aaKnown RBP17.07■□□□□ 0.32
CSNK1G3-201ENST00000345990 COG6Q9Y2V7 657 aa17.07■□□□□ 0.32
CSNK1G3-201ENST00000345990 GNAI3P08754 354 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms