RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 NINLQ9Y2I6 1382 aa28.94■■■□□ 2.22
SMARCB1-202ENST00000344921 MEX3CQ5U5Q3 659 aaKnown RBP28.94■■■□□ 2.22
SMARCB1-202ENST00000344921 AKAP12Q02952 1782 aa28.92■■■□□ 2.22
SMARCB1-202ENST00000344921 MED1Q15648 1581 aaPredicted RBP28.92■■■□□ 2.22
SMARCB1-202ENST00000344921 HAP1P54257 671 aaPredicted RBP28.92■■■□□ 2.22
SMARCB1-202ENST00000344921 ABTB2Q8N961 1025 aa28.92■■■□□ 2.22
SMARCB1-202ENST00000344921 CPSF1Q10570 1443 aaKnown RBP28.92■■■□□ 2.22
SMARCB1-202ENST00000344921 COL22A1Q8NFW1 1626 aaPredicted RBP28.92■■■□□ 2.22
SMARCB1-202ENST00000344921 ALS2Q96Q42 1657 aa28.91■■■□□ 2.22
SMARCB1-202ENST00000344921 NUTM2GQ5VZR2 741 aa28.91■■■□□ 2.22
SMARCB1-202ENST00000344921 BRD4O60885 1362 aaPredicted RBP28.9■■■□□ 2.22
SMARCB1-202ENST00000344921 CABLES1Q8TDN4 633 aa28.89■■■□□ 2.22
SMARCB1-202ENST00000344921 LRP6O75581 1613 aa28.89■■■□□ 2.21
SMARCB1-202ENST00000344921 ADAMTS2O95450 1211 aa28.89■■■□□ 2.21
SMARCB1-202ENST00000344921 CD163L1Q9NR16 1453 aa28.89■■■□□ 2.21
SMARCB1-202ENST00000344921 A0A1W2PP64 1363 aa28.88■■■□□ 2.21
SMARCB1-202ENST00000344921 PHF23Q9BUL5 403 aaPredicted RBP28.87■■■□□ 2.21
SMARCB1-202ENST00000344921 C11orf95C9JLR9 678 aaPredicted RBP28.86■■■□□ 2.21
SMARCB1-202ENST00000344921 TTC21BQ7Z4L5 1316 aa28.86■■■□□ 2.21
SMARCB1-202ENST00000344921 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.86■■■□□ 2.217e-7■■□□□ 13.6
SMARCB1-202ENST00000344921 MON2Q7Z3U7 1717 aa28.85■■■□□ 2.21
SMARCB1-202ENST00000344921 ANKRD36BQ8N2N9 1353 aa28.84■■■□□ 2.21
SMARCB1-202ENST00000344921 SSH2Q76I76 1423 aa28.83■■■□□ 2.21
SMARCB1-202ENST00000344921 TTC21AQ8NDW8 1320 aa28.83■■■□□ 2.21
SMARCB1-202ENST00000344921 NLRP13Q86W25 1043 aa28.83■■■□□ 2.21
SMARCB1-202ENST00000344921 NLRP6P59044 892 aa28.82■■■□□ 2.2
SMARCB1-202ENST00000344921 MYOM1P52179 1685 aa28.82■■■□□ 2.2
SMARCB1-202ENST00000344921 C8orf37Q96NL8 207 aa28.81■■■□□ 2.2
SMARCB1-202ENST00000344921 EDC4Q6P2E9 1401 aaKnown RBP28.81■■■□□ 2.2
SMARCB1-202ENST00000344921 NRKQ7Z2Y5 1582 aa28.8■■■□□ 2.2
SMARCB1-202ENST00000344921 KIF7Q2M1P5 1343 aa28.79■■■□□ 2.2
SMARCB1-202ENST00000344921 NGLY1Q96IV0 654 aa28.77■■■□□ 2.2
SMARCB1-202ENST00000344921 ABCA3Q99758 1704 aa28.76■■■□□ 2.2
SMARCB1-202ENST00000344921 PIK3C2AO00443 1686 aa28.76■■■□□ 2.19
SMARCB1-202ENST00000344921 NME9Q86XW9 330 aa28.75■■■□□ 2.19
SMARCB1-202ENST00000344921 MARF1Q9Y4F3 1742 aaKnown RBP28.73■■■□□ 2.19
SMARCB1-202ENST00000344921 CRYBG1Q9Y4K1 1723 aa28.72■■■□□ 2.19
SMARCB1-202ENST00000344921 PHRF1Q9P1Y6 1649 aaKnown RBP28.71■■■□□ 2.19
SMARCB1-202ENST00000344921 PANK3Q9H999 370 aa28.71■■■□□ 2.19
SMARCB1-202ENST00000344921 ZRANB1Q9UGI0 708 aa28.71■■■□□ 2.19
SMARCB1-202ENST00000344921 USP19O94966 1318 aa28.71■■■□□ 2.19
SMARCB1-202ENST00000344921 AFF2P51816 1311 aa28.71■■■□□ 2.19
SMARCB1-202ENST00000344921 CCDC7Q96M83 1385 aa28.7■■■□□ 2.19
SMARCB1-202ENST00000344921 GCP02774 474 aa28.7■■■□□ 2.19
SMARCB1-202ENST00000344921 ZC3H6P61129 1189 aaKnown RBP28.7■■■□□ 2.19
SMARCB1-202ENST00000344921 CARD14Q9BXL6 1004 aa28.7■■■□□ 2.19
SMARCB1-202ENST00000344921 WASHC2AQ641Q2 1341 aa28.69■■■□□ 2.18
SMARCB1-202ENST00000344921 SOX12O15370 315 aa28.69■■■□□ 2.18
SMARCB1-202ENST00000344921 NSD3Q9BZ95 1437 aa28.68■■■□□ 2.18
SMARCB1-202ENST00000344921 PRDM11Q9NQV5 511 aa28.67■■■□□ 2.18
SMARCB1-202ENST00000344921 ZNF772Q68DY9 489 aaPredicted RBP28.66■■■□□ 2.18
SMARCB1-202ENST00000344921 KCNH5Q8NCM2 988 aa28.66■■■□□ 2.18
SMARCB1-202ENST00000344921 RGS17Q9UGC6 210 aaPredicted RBP28.66■■■□□ 2.18
SMARCB1-202ENST00000344921 USP31Q70CQ4 1352 aa28.66■■■□□ 2.18
SMARCB1-202ENST00000344921 ZBTB7CA1YPR0 619 aa28.65■■■□□ 2.18
SMARCB1-202ENST00000344921 FAM83GA6ND36 823 aa28.65■■■□□ 2.18
SMARCB1-202ENST00000344921 KIAA0232Q92628 1395 aa28.65■■■□□ 2.18
SMARCB1-202ENST00000344921 COG3Q96JB2 828 aa28.65■■■□□ 2.18
SMARCB1-202ENST00000344921 USP21Q9UK80 565 aa28.65■■■□□ 2.18
SMARCB1-202ENST00000344921 FYB1O15117 783 aa28.63■■■□□ 2.17
SMARCB1-202ENST00000344921 FNBP4Q8N3X1 1017 aaPredicted RBP28.63■■■□□ 2.17
SMARCB1-202ENST00000344921 GGNBP2Q9H3C7 697 aa28.63■■■□□ 2.17
SMARCB1-202ENST00000344921 SLIT3O75094 1523 aa28.63■■■□□ 2.17
SMARCB1-202ENST00000344921 CHRNA2Q15822 529 aa28.62■■■□□ 2.17
SMARCB1-202ENST00000344921 CGNL1Q0VF96 1302 aa28.61■■■□□ 2.17
SMARCB1-202ENST00000344921 KIF20BQ96Q89 1820 aa28.59■■■□□ 2.17
SMARCB1-202ENST00000344921 OVOS2A0A0J9YW53 1432 aa28.59■■■□□ 2.17
SMARCB1-202ENST00000344921 OVOS2Q6IE36 1432 aa28.59■■■□□ 2.17
SMARCB1-202ENST00000344921 COL14A1Q05707 1796 aaKnown RBP28.59■■■□□ 2.17
SMARCB1-202ENST00000344921 BTG4Q9NY30 223 aa28.58■■■□□ 2.17
SMARCB1-202ENST00000344921 KNSTRNQ9Y448 316 aa28.58■■■□□ 2.17
SMARCB1-202ENST00000344921 USP54Q70EL1 1684 aa28.58■■■□□ 2.17
SMARCB1-202ENST00000344921 CPDO75976 1380 aa28.57■■■□□ 2.16
SMARCB1-202ENST00000344921 PLCH1Q4KWH8 1693 aa28.57■■■□□ 2.16
SMARCB1-202ENST00000344921 SLIT2O94813 1529 aa28.57■■■□□ 2.16
SMARCB1-202ENST00000344921 POTEAQ6S8J7 498 aa28.57■■■□□ 2.16
SMARCB1-202ENST00000344921 QTRT2Q9H974 415 aaKnown RBP28.57■■■□□ 2.16
SMARCB1-202ENST00000344921 UNC5CLQ8IV45 518 aa28.56■■■□□ 2.16
SMARCB1-202ENST00000344921 BCL9LQ86UU0 1499 aa28.55■■■□□ 2.16
SMARCB1-202ENST00000344921 TRPC5Q9UL62 973 aaPredicted RBP28.53■■■□□ 2.16
SMARCB1-202ENST00000344921 NWD2Q9ULI1 1742 aa28.53■■■□□ 2.16
SMARCB1-202ENST00000344921 NFAT5O94916 1531 aa28.53■■■□□ 2.16
SMARCB1-202ENST00000344921 ARHGEF25Q86VW2 580 aa28.52■■■□□ 2.16
SMARCB1-202ENST00000344921 CCDC9Q9Y3X0 531 aaKnown RBP28.51■■■□□ 2.15
SMARCB1-202ENST00000344921 EVA1CP58658 441 aa28.5■■■□□ 2.15
SMARCB1-202ENST00000344921 STRN4Q9NRL3 753 aa28.49■■■□□ 2.15
SMARCB1-202ENST00000344921 FBLN1P23142 703 aa28.49■■■□□ 2.15
SMARCB1-202ENST00000344921 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.48■■■□□ 2.15
SMARCB1-202ENST00000344921 AATKQ6ZMQ8 1374 aa28.48■■■□□ 2.15
SMARCB1-202ENST00000344921 RXRBP28702 533 aa28.47■■■□□ 2.15
SMARCB1-202ENST00000344921 LTN1O94822 1766 aa28.46■■■□□ 2.15
SMARCB1-202ENST00000344921 ATRNO75882 1429 aa28.46■■■□□ 2.15
SMARCB1-202ENST00000344921 CAMTA1Q9Y6Y1 1673 aa28.45■■■□□ 2.15
SMARCB1-202ENST00000344921 NSD2O96028 1365 aa28.45■■■□□ 2.14
SMARCB1-202ENST00000344921 PER1O15534 1290 aaPredicted RBP28.45■■■□□ 2.14
SMARCB1-202ENST00000344921 RBM6P78332 1123 aaKnown RBP28.45■■■□□ 2.14
SMARCB1-202ENST00000344921 NRAPQ86VF7 1730 aa28.45■■■□□ 2.14
SMARCB1-202ENST00000344921 VPS72Q15906 364 aa28.44■■■□□ 2.14
SMARCB1-202ENST00000344921 LMO7Q8WWI1 1683 aa28.44■■■□□ 2.14
SMARCB1-202ENST00000344921 TNNT2P45379 298 aaPredicted RBP28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms