RNA–Protein interactions for RNA: ENST00000343677.3

HIST1H1C-201, Transcript of histone cluster 1 H1 family member c, humanhuman

APPRIS P1 BASIC

Gene HIST1H1C, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1C-201ENST00000343677 TERF2IPQ9NYB0 399 aa17.36■□□□□ 0.37
HIST1H1C-201ENST00000343677 WASHC2AQ641Q2 1341 aa17.36■□□□□ 0.37
HIST1H1C-201ENST00000343677 SBNO1A3KN83 1393 aa17.36■□□□□ 0.37
HIST1H1C-201ENST00000343677 CCDC7Q96M83 1385 aa17.36■□□□□ 0.37
HIST1H1C-201ENST00000343677 NINLQ9Y2I6 1382 aa17.36■□□□□ 0.37
HIST1H1C-201ENST00000343677 NUTM2BA6NNL0 878 aaPredicted RBP17.35■□□□□ 0.37
HIST1H1C-201ENST00000343677 NUTM2EB1AL46 878 aaPredicted RBP17.35■□□□□ 0.37
HIST1H1C-201ENST00000343677 NUTM2AQ8IVF1 878 aaPredicted RBP17.35■□□□□ 0.37
HIST1H1C-201ENST00000343677 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.35■□□□□ 0.37
HIST1H1C-201ENST00000343677 NRKQ7Z2Y5 1582 aa17.35■□□□□ 0.37
HIST1H1C-201ENST00000343677 SHPRHQ149N8 1683 aa17.35■□□□□ 0.37
HIST1H1C-201ENST00000343677 ALS2Q96Q42 1657 aa17.35■□□□□ 0.37
HIST1H1C-201ENST00000343677 ANKRD36BQ8N2N9 1353 aa17.34■□□□□ 0.37
HIST1H1C-201ENST00000343677 ZNF692Q9BU19 519 aaPredicted RBP17.34■□□□□ 0.37
HIST1H1C-201ENST00000343677 CABLES1Q8TDN4 633 aa17.33■□□□□ 0.36
HIST1H1C-201ENST00000343677 TTC21BQ7Z4L5 1316 aa17.32■□□□□ 0.36
HIST1H1C-201ENST00000343677 ABTB2Q8N961 1025 aa17.32■□□□□ 0.36
HIST1H1C-201ENST00000343677 SSH2Q76I76 1423 aa17.31■□□□□ 0.36
HIST1H1C-201ENST00000343677 ZRANB1Q9UGI0 708 aa17.31■□□□□ 0.36
HIST1H1C-201ENST00000343677 PIK3C2AO00443 1686 aa17.31■□□□□ 0.36
HIST1H1C-201ENST00000343677 ARHGEF10O15013 1369 aa17.3■□□□□ 0.36
HIST1H1C-201ENST00000343677 COL22A1Q8NFW1 1626 aaPredicted RBP17.3■□□□□ 0.36
HIST1H1C-201ENST00000343677 NME9Q86XW9 330 aa17.3■□□□□ 0.36
HIST1H1C-201ENST00000343677 CARD14Q9BXL6 1004 aa17.3■□□□□ 0.36
HIST1H1C-201ENST00000343677 PANK3Q9H999 370 aa17.3■□□□□ 0.36
HIST1H1C-201ENST00000343677 EDC4Q6P2E9 1401 aaKnown RBP17.3■□□□□ 0.36
HIST1H1C-201ENST00000343677 NSD3Q9BZ95 1437 aa17.3■□□□□ 0.36
HIST1H1C-201ENST00000343677 HAP1P54257 671 aaPredicted RBP17.29■□□□□ 0.36
HIST1H1C-201ENST00000343677 LRP6O75581 1613 aa17.29■□□□□ 0.36
HIST1H1C-201ENST00000343677 ABCA3Q99758 1704 aa17.28■□□□□ 0.36
HIST1H1C-201ENST00000343677 NLRP6P59044 892 aa17.28■□□□□ 0.36
HIST1H1C-201ENST00000343677 MED1Q15648 1581 aaPredicted RBP17.28■□□□□ 0.36
HIST1H1C-201ENST00000343677 TTC21AQ8NDW8 1320 aa17.27■□□□□ 0.36
HIST1H1C-201ENST00000343677 ADAMTS2O95450 1211 aa17.27■□□□□ 0.36
HIST1H1C-201ENST00000343677 BRD4O60885 1362 aaPredicted RBP17.27■□□□□ 0.35
HIST1H1C-201ENST00000343677 SPATA31A6Q5VVP1 1343 aa17.26■□□□□ 0.35
HIST1H1C-201ENST00000343677 SOX12O15370 315 aa17.26■□□□□ 0.35
HIST1H1C-201ENST00000343677 MEX3CQ5U5Q3 659 aaKnown RBP17.26■□□□□ 0.35
HIST1H1C-201ENST00000343677 PHRF1Q9P1Y6 1649 aaKnown RBP17.25■□□□□ 0.35
HIST1H1C-201ENST00000343677 MARF1Q9Y4F3 1742 aaKnown RBP17.25■□□□□ 0.35
HIST1H1C-201ENST00000343677 CRYBG1Q9Y4K1 1723 aa17.25■□□□□ 0.35
HIST1H1C-201ENST00000343677 KIF20BQ96Q89 1820 aa17.25■□□□□ 0.35
HIST1H1C-201ENST00000343677 NLRP13Q86W25 1043 aa17.24■□□□□ 0.35
HIST1H1C-201ENST00000343677 GGNBP2Q9H3C7 697 aa17.24■□□□□ 0.35
HIST1H1C-201ENST00000343677 ZBTB7CA1YPR0 619 aa17.23■□□□□ 0.35
HIST1H1C-201ENST00000343677 CNGB1Q14028 1251 aaPredicted RBP17.23■□□□□ 0.35
HIST1H1C-201ENST00000343677 C8orf37Q96NL8 207 aa17.22■□□□□ 0.35
HIST1H1C-201ENST00000343677 USP19O94966 1318 aa17.21■□□□□ 0.35
HIST1H1C-201ENST00000343677 FYB1O15117 783 aa17.21■□□□□ 0.35
HIST1H1C-201ENST00000343677 ZC3H6P61129 1189 aaKnown RBP17.21■□□□□ 0.35
HIST1H1C-201ENST00000343677 ZNF316A6NFI3 1004 aaPredicted RBP17.2■□□□□ 0.34
HIST1H1C-201ENST00000343677 USP31Q70CQ4 1352 aa17.19■□□□□ 0.34
HIST1H1C-201ENST00000343677 DDX10Q13206 875 aaKnown RBP17.19■□□□□ 0.34
HIST1H1C-201ENST00000343677 COG3Q96JB2 828 aa17.19■□□□□ 0.34
HIST1H1C-201ENST00000343677 KNSTRNQ9Y448 316 aa17.19■□□□□ 0.34
HIST1H1C-201ENST00000343677 SLIT3O75094 1523 aa17.19■□□□□ 0.34
HIST1H1C-201ENST00000343677 OVOS2A0A0J9YW53 1432 aa17.19■□□□□ 0.34
HIST1H1C-201ENST00000343677 OVOS2Q6IE36 1432 aa17.19■□□□□ 0.34
HIST1H1C-201ENST00000343677 CGNL1Q0VF96 1302 aa17.19■□□□□ 0.34
HIST1H1C-201ENST00000343677 GCP02774 474 aa17.18■□□□□ 0.34
HIST1H1C-201ENST00000343677 FBLN1P23142 703 aa17.18■□□□□ 0.34
HIST1H1C-201ENST00000343677 KIAA0232Q92628 1395 aa17.17■□□□□ 0.34
HIST1H1C-201ENST00000343677 USP54Q70EL1 1684 aa17.17■□□□□ 0.34
HIST1H1C-201ENST00000343677 CHRNA2Q15822 529 aa17.17■□□□□ 0.34
HIST1H1C-201ENST00000343677 NGLY1Q96IV0 654 aa17.16■□□□□ 0.34
HIST1H1C-201ENST00000343677 FAM83GA6ND36 823 aa17.15■□□□□ 0.34
HIST1H1C-201ENST00000343677 PER1O15534 1290 aaPredicted RBP17.15■□□□□ 0.34
HIST1H1C-201ENST00000343677 TNNT2P45379 298 aaPredicted RBP17.15■□□□□ 0.34
HIST1H1C-201ENST00000343677 CC2D1BQ5T0F9 858 aaKnown RBP17.15■□□□□ 0.34
HIST1H1C-201ENST00000343677 PHF23Q9BUL5 403 aaPredicted RBP17.15■□□□□ 0.34
HIST1H1C-201ENST00000343677 PRDM11Q9NQV5 511 aa17.15■□□□□ 0.34
HIST1H1C-201ENST00000343677 NFAT5O94916 1531 aa17.15■□□□□ 0.34
HIST1H1C-201ENST00000343677 ANKRD26Q9UPS8 1709 aa17.14■□□□□ 0.33
HIST1H1C-201ENST00000343677 KCNH5Q8NCM2 988 aa17.14■□□□□ 0.33
HIST1H1C-201ENST00000343677 PLCH1Q4KWH8 1693 aa17.13■□□□□ 0.33
HIST1H1C-201ENST00000343677 AMER1Q5JTC6 1135 aaPredicted RBP17.13■□□□□ 0.33
HIST1H1C-201ENST00000343677 AFF2P51816 1311 aa17.13■□□□□ 0.33
HIST1H1C-201ENST00000343677 LTN1O94822 1766 aa17.12■□□□□ 0.33
HIST1H1C-201ENST00000343677 COL14A1Q05707 1796 aaKnown RBP17.12■□□□□ 0.33
HIST1H1C-201ENST00000343677 RRS1Q15050 365 aaKnown RBP17.11■□□□□ 0.33
HIST1H1C-201ENST00000343677 MORC1Q86VD1 984 aa17.11■□□□□ 0.33
HIST1H1C-201ENST00000343677 BTG4Q9NY30 223 aa17.1■□□□□ 0.33
HIST1H1C-201ENST00000343677 ARHGEF25Q86VW2 580 aa17.09■□□□□ 0.33
HIST1H1C-201ENST00000343677 STRN4Q9NRL3 753 aa17.09■□□□□ 0.33
HIST1H1C-201ENST00000343677 RGS17Q9UGC6 210 aaPredicted RBP17.09■□□□□ 0.33
HIST1H1C-201ENST00000343677 USP21Q9UK80 565 aa17.09■□□□□ 0.33
HIST1H1C-201ENST00000343677 CPDO75976 1380 aa17.09■□□□□ 0.33
HIST1H1C-201ENST00000343677 NSD2O96028 1365 aa17.09■□□□□ 0.33
HIST1H1C-201ENST00000343677 RGPD5Q99666 1765 aa17.08■□□□□ 0.33
HIST1H1C-201ENST00000343677 LMO7Q8WWI1 1683 aa17.07■□□□□ 0.32
HIST1H1C-201ENST00000343677 SLIT2O94813 1529 aa17.07■□□□□ 0.32
HIST1H1C-201ENST00000343677 MAP3K19Q56UN5 1328 aa17.07■□□□□ 0.32
HIST1H1C-201ENST00000343677 PPM1GO15355 546 aaPredicted RBP17.07■□□□□ 0.32
HIST1H1C-201ENST00000343677 COL18A1P39060 1754 aa17.07■□□□□ 0.32
HIST1H1C-201ENST00000343677 CAMTA1Q9Y6Y1 1673 aa17.07■□□□□ 0.32
HIST1H1C-201ENST00000343677 BCL9LQ86UU0 1499 aa17.06■□□□□ 0.32
HIST1H1C-201ENST00000343677 FNBP4Q8N3X1 1017 aaPredicted RBP17.06■□□□□ 0.32
HIST1H1C-201ENST00000343677 AXIN2Q9Y2T1 843 aa17.06■□□□□ 0.32
HIST1H1C-201ENST00000343677 EMILIN1Q9Y6C2 1016 aa17.06■□□□□ 0.32
HIST1H1C-201ENST00000343677 NRAPQ86VF7 1730 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms