RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 PLEKHG5O94827 1062 aa26.94■■□□□ 1.9
SYNE4-202ENST00000340477 AKAP12Q02952 1782 aa26.93■■□□□ 1.9
SYNE4-202ENST00000340477 ILDR2Q71H61 639 aa26.92■■□□□ 1.9
SYNE4-202ENST00000340477 TESK2Q96S53 571 aa26.91■■□□□ 1.9
SYNE4-202ENST00000340477 USP6P35125 1406 aa26.9■■□□□ 1.9
SYNE4-202ENST00000340477 TMF1P82094 1093 aa26.9■■□□□ 1.9
SYNE4-202ENST00000340477 PUS7Q96PZ0 661 aaKnown RBP26.9■■□□□ 1.9
SYNE4-202ENST00000340477 TMC1Q8TDI8 760 aa26.89■■□□□ 1.9
SYNE4-202ENST00000340477 CABLES1Q8TDN4 633 aa26.89■■□□□ 1.9
SYNE4-202ENST00000340477 ZNF692Q9BU19 519 aaPredicted RBP26.89■■□□□ 1.9
SYNE4-202ENST00000340477 POTEAQ6S8J7 498 aa26.87■■□□□ 1.89
SYNE4-202ENST00000340477 ABTB2Q8N961 1025 aa26.87■■□□□ 1.89
SYNE4-202ENST00000340477 CRYBG1Q9Y4K1 1723 aa26.87■■□□□ 1.89
SYNE4-202ENST00000340477 NINLQ9Y2I6 1382 aa26.86■■□□□ 1.89
SYNE4-202ENST00000340477 CDCA8Q53HL2 280 aa26.86■■□□□ 1.89
SYNE4-202ENST00000340477 PHRF1Q9P1Y6 1649 aaKnown RBP26.86■■□□□ 1.89
SYNE4-202ENST00000340477 MON2Q7Z3U7 1717 aa26.85■■□□□ 1.89
SYNE4-202ENST00000340477 KTN1Q86UP2 1357 aaKnown RBP26.84■■□□□ 1.89
SYNE4-202ENST00000340477 HDGFL2Q7Z4V5 671 aaPredicted RBP26.84■■□□□ 1.89
SYNE4-202ENST00000340477 USP21Q9UK80 565 aa26.84■■□□□ 1.89
SYNE4-202ENST00000340477 TERF2IPQ9NYB0 399 aa26.83■■□□□ 1.89
SYNE4-202ENST00000340477 PLCH1Q4KWH8 1693 aa26.82■■□□□ 1.88
SYNE4-202ENST00000340477 EIF4G2P78344 907 aaKnown RBP eCLIP26.82■■□□□ 1.88
SYNE4-202ENST00000340477 NUTM2GQ5VZR2 741 aa26.82■■□□□ 1.88
SYNE4-202ENST00000340477 FNBP4Q8N3X1 1017 aaPredicted RBP26.82■■□□□ 1.88
SYNE4-202ENST00000340477 NRKQ7Z2Y5 1582 aa26.82■■□□□ 1.88
SYNE4-202ENST00000340477 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.82■■□□□ 1.88
SYNE4-202ENST00000340477 CPSF1Q10570 1443 aaKnown RBP26.82■■□□□ 1.88
SYNE4-202ENST00000340477 NLRP13Q86W25 1043 aa26.81■■□□□ 1.88
SYNE4-202ENST00000340477 NWD2Q9ULI1 1742 aa26.81■■□□□ 1.88
SYNE4-202ENST00000340477 COL14A1Q05707 1796 aaKnown RBP26.8■■□□□ 1.88
SYNE4-202ENST00000340477 RXRBP28702 533 aa26.79■■□□□ 1.88
SYNE4-202ENST00000340477 QTRT2Q9H974 415 aaKnown RBP26.79■■□□□ 1.88
SYNE4-202ENST00000340477 TRPC5Q9UL62 973 aaPredicted RBP26.79■■□□□ 1.88
SYNE4-202ENST00000340477 TTC21AQ8NDW8 1320 aa26.79■■□□□ 1.88
SYNE4-202ENST00000340477 PIK3C2AO00443 1686 aa26.79■■□□□ 1.88
SYNE4-202ENST00000340477 SLIT2O94813 1529 aa26.77■■□□□ 1.88
SYNE4-202ENST00000340477 SSH2Q76I76 1423 aa26.77■■□□□ 1.88
SYNE4-202ENST00000340477 TTC21BQ7Z4L5 1316 aa26.77■■□□□ 1.88
SYNE4-202ENST00000340477 SLC12A5Q9H2X9 1139 aa26.77■■□□□ 1.88
SYNE4-202ENST00000340477 CD163L1Q9NR16 1453 aa26.75■■□□□ 1.87
SYNE4-202ENST00000340477 USP19O94966 1318 aa26.75■■□□□ 1.87
SYNE4-202ENST00000340477 NLRP6P59044 892 aa26.75■■□□□ 1.87
SYNE4-202ENST00000340477 PRDM11Q9NQV5 511 aa26.75■■□□□ 1.87
SYNE4-202ENST00000340477 A0A1W2PP64 1363 aa26.74■■□□□ 1.87
SYNE4-202ENST00000340477 RBM6P78332 1123 aaKnown RBP26.74■■□□□ 1.87
SYNE4-202ENST00000340477 UNC5CLQ8IV45 518 aa26.74■■□□□ 1.87
SYNE4-202ENST00000340477 BCL9LQ86UU0 1499 aa26.74■■□□□ 1.87
SYNE4-202ENST00000340477 ATRNO75882 1429 aa26.73■■□□□ 1.87
SYNE4-202ENST00000340477 EDC4Q6P2E9 1401 aaKnown RBP26.73■■□□□ 1.87
SYNE4-202ENST00000340477 HSPA5P11021 654 aaKnown RBP26.72■■□□□ 1.87
SYNE4-202ENST00000340477 CDK12Q9NYV4 1490 aaPredicted RBP26.72■■□□□ 1.87
SYNE4-202ENST00000340477 SOCS7O14512 581 aa26.71■■□□□ 1.87
SYNE4-202ENST00000340477 KIAA0232Q92628 1395 aa26.71■■□□□ 1.87
SYNE4-202ENST00000340477 SLIT3O75094 1523 aa26.7■■□□□ 1.87
SYNE4-202ENST00000340477 FAM83GA6ND36 823 aa26.7■■□□□ 1.86
SYNE4-202ENST00000340477 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.7■■□□□ 1.86
SYNE4-202ENST00000340477 ANKRD36BQ8N2N9 1353 aa26.7■■□□□ 1.86
SYNE4-202ENST00000340477 ZC3H6P61129 1189 aaKnown RBP26.69■■□□□ 1.86
SYNE4-202ENST00000340477 NRAPQ86VF7 1730 aa26.68■■□□□ 1.86
SYNE4-202ENST00000340477 GCP02774 474 aa26.68■■□□□ 1.86
SYNE4-202ENST00000340477 MYOM1P52179 1685 aa26.67■■□□□ 1.86
SYNE4-202ENST00000340477 BTG4Q9NY30 223 aa26.67■■□□□ 1.86
SYNE4-202ENST00000340477 CPDO75976 1380 aa26.67■■□□□ 1.86
SYNE4-202ENST00000340477 USP54Q70EL1 1684 aa26.66■■□□□ 1.86
SYNE4-202ENST00000340477 KCNH5Q8NCM2 988 aa26.66■■□□□ 1.86
SYNE4-202ENST00000340477 POLR3GLQ9BT43 218 aa26.66■■□□□ 1.86
SYNE4-202ENST00000340477 CCDC9Q9Y3X0 531 aaKnown RBP26.66■■□□□ 1.86
SYNE4-202ENST00000340477 CHRNA2Q15822 529 aa26.63■■□□□ 1.85
SYNE4-202ENST00000340477 VPS72Q15906 364 aa26.63■■□□□ 1.85
SYNE4-202ENST00000340477 GJD4Q96KN9 370 aaPredicted RBP26.63■■□□□ 1.85
SYNE4-202ENST00000340477 USP31Q70CQ4 1352 aa26.62■■□□□ 1.85
SYNE4-202ENST00000340477 ZBTB7CA1YPR0 619 aa26.62■■□□□ 1.85
SYNE4-202ENST00000340477 NME9Q86XW9 330 aa26.61■■□□□ 1.85
SYNE4-202ENST00000340477 RGS12O14924 1447 aa26.61■■□□□ 1.85
SYNE4-202ENST00000340477 SOX12O15370 315 aa26.59■■□□□ 1.85
SYNE4-202ENST00000340477 GLI3P10071 1580 aa26.58■■□□□ 1.85
SYNE4-202ENST00000340477 LMO7Q8WWI1 1683 aa26.58■■□□□ 1.85
SYNE4-202ENST00000340477 KIF20BQ96Q89 1820 aa26.58■■□□□ 1.84
SYNE4-202ENST00000340477 EVA1CP58658 441 aa26.57■■□□□ 1.84
SYNE4-202ENST00000340477 NFAT5O94916 1531 aa26.56■■□□□ 1.84
SYNE4-202ENST00000340477 STRN4Q9NRL3 753 aa26.56■■□□□ 1.84
SYNE4-202ENST00000340477 COG3Q96JB2 828 aa26.55■■□□□ 1.84
SYNE4-202ENST00000340477 AATKQ6ZMQ8 1374 aa26.55■■□□□ 1.84
SYNE4-202ENST00000340477 OVOS2A0A0J9YW53 1432 aa26.55■■□□□ 1.84
SYNE4-202ENST00000340477 OVOS2Q6IE36 1432 aa26.55■■□□□ 1.84
SYNE4-202ENST00000340477 ZRANB1Q9UGI0 708 aa26.54■■□□□ 1.84
SYNE4-202ENST00000340477 CAMTA1Q9Y6Y1 1673 aa26.54■■□□□ 1.84
SYNE4-202ENST00000340477 LTN1O94822 1766 aa26.53■■□□□ 1.84
SYNE4-202ENST00000340477 ABCC6O95255 1503 aa26.53■■□□□ 1.84
SYNE4-202ENST00000340477 NSD3Q9BZ95 1437 aa26.52■■□□□ 1.84
SYNE4-202ENST00000340477 A0A0G2JS52 829 aa26.51■■□□□ 1.83
SYNE4-202ENST00000340477 MYT1Q01538 1121 aa26.51■■□□□ 1.83
SYNE4-202ENST00000340477 SPATA31A5Q5VU36 1347 aa26.5■■□□□ 1.83
SYNE4-202ENST00000340477 SPATA31A7Q8IWB4 1347 aa26.5■■□□□ 1.83
SYNE4-202ENST00000340477 ARHGEF25Q86VW2 580 aa26.5■■□□□ 1.83
SYNE4-202ENST00000340477 COL5A2P05997 1499 aaPredicted RBP26.49■■□□□ 1.83
SYNE4-202ENST00000340477 COL18A1P39060 1754 aa26.49■■□□□ 1.83
SYNE4-202ENST00000340477 RGPD5Q99666 1765 aa26.46■■□□□ 1.83
SYNE4-202ENST00000340477 CGNL1Q0VF96 1302 aa26.45■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms