RNA–Protein interactions for RNA: ENST00000340001.8

ABCA9-201, Transcript of ATP binding cassette subfamily A member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA9, Length 6,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9-201ENST00000340001 ATXN8OSP0DMR3 200 aa8.77□□□□□ -1.01
ABCA9-201ENST00000340001 CCDC47Q96A33 483 aaKnown RBP8.77□□□□□ -1.01
ABCA9-201ENST00000340001 MYOM3Q5VTT5 1437 aa8.77□□□□□ -1.01
ABCA9-201ENST00000340001 ARAP1Q96P48 1450 aa8.77□□□□□ -1.01
ABCA9-201ENST00000340001 WDR97A6NE52 1622 aa8.77□□□□□ -1.01
ABCA9-201ENST00000340001 AFAP1Q8N556 730 aa8.77□□□□□ -1.01
ABCA9-201ENST00000340001 ZC3H6P61129 1189 aaKnown RBP8.77□□□□□ -1.01
ABCA9-201ENST00000340001 DDX19BQ9UMR2 479 aa8.77□□□□□ -1.01
ABCA9-201ENST00000340001 HSP90AA2PQ14568 343 aaPredicted RBP8.76□□□□□ -1.01
ABCA9-201ENST00000340001 NFKBIBQ15653 356 aa8.76□□□□□ -1.01
ABCA9-201ENST00000340001 STAC3Q96MF2 364 aa8.76□□□□□ -1.01
ABCA9-201ENST00000340001 SSBP05455 408 aaKnown RBP eCLIP8.76□□□□□ -1.01
ABCA9-201ENST00000340001 TPM1P09493 284 aa8.76□□□□□ -1.01
ABCA9-201ENST00000340001 CSPP1Q1MSJ5 1256 aa8.76□□□□□ -1.01
ABCA9-201ENST00000340001 NBPF8Q3BBV2 869 aa8.76□□□□□ -1.01
ABCA9-201ENST00000340001 RNF214Q8ND24 703 aa8.76□□□□□ -1.01
ABCA9-201ENST00000340001 CEBPZQ03701 1054 aaKnown RBP8.76□□□□□ -1.01
ABCA9-201ENST00000340001 PDILTQ8N807 584 aa8.76□□□□□ -1.01
ABCA9-201ENST00000340001 C22orf23Q9BZE7 217 aa8.76□□□□□ -1.01
ABCA9-201ENST00000340001 SEPT11Q9NVA2 429 aaKnown RBP8.76□□□□□ -1.01
ABCA9-201ENST00000340001 UACAQ9BZF9 1416 aa8.76□□□□□ -1.01
ABCA9-201ENST00000340001 BICD2Q8TD16 824 aa8.76□□□□□ -1.01
ABCA9-201ENST00000340001 NESP48681 1621 aa8.76□□□□□ -1.01
ABCA9-201ENST00000340001 NEFHP12036 1026 aa8.76□□□□□ -1.01
ABCA9-201ENST00000340001 CPLX2Q6PUV4 134 aaKnown RBP8.76□□□□□ -1.01
ABCA9-201ENST00000340001 CDK5RAP3Q96JB5 506 aa8.75□□□□□ -1.01
ABCA9-201ENST00000340001 FAM13BQ9NYF5 915 aa8.75□□□□□ -1.01
ABCA9-201ENST00000340001 DDX58O95786 925 aaKnown RBP8.75□□□□□ -1.01
ABCA9-201ENST00000340001 BRPF3Q9ULD4 1205 aa8.75□□□□□ -1.01
ABCA9-201ENST00000340001 HDAC5Q9UQL6 1122 aa8.75□□□□□ -1.01
ABCA9-201ENST00000340001 CSPG5O95196 566 aa8.75□□□□□ -1.01
ABCA9-201ENST00000340001 NOB1Q9ULX3 412 aaKnown RBP8.75□□□□□ -1.01
ABCA9-201ENST00000340001 CUX1P39880 1505 aa8.75□□□□□ -1.01
ABCA9-201ENST00000340001 KCNA4P22459 653 aa8.74□□□□□ -1.01
ABCA9-201ENST00000340001 SSR1P43307 286 aaKnown RBP8.74□□□□□ -1.01
ABCA9-201ENST00000340001 ZNF408Q9H9D4 720 aa8.74□□□□□ -1.01
ABCA9-201ENST00000340001 RALYLQ86SE5 291 aaKnown RBP8.74□□□□□ -1.01
ABCA9-201ENST00000340001 EXOSC9Q06265 439 aaKnown RBP8.74□□□□□ -1.01
ABCA9-201ENST00000340001 IL27Q8NEV9 243 aa8.74□□□□□ -1.01
ABCA9-201ENST00000340001 ZNF622Q969S3 477 aaKnown RBP eCLIP8.74□□□□□ -1.01
ABCA9-201ENST00000340001 FANCIQ9NVI1 1328 aa8.74□□□□□ -1.01
ABCA9-201ENST00000340001 PLCD4Q9BRC7 762 aa8.74□□□□□ -1.01
ABCA9-201ENST00000340001 RFX1P22670 979 aa8.74□□□□□ -1.01
ABCA9-201ENST00000340001 PPP2R1AP30153 589 aa8.74□□□□□ -1.01
ABCA9-201ENST00000340001 RBM26Q5T8P6 1007 aaKnown RBP8.74□□□□□ -1.01
ABCA9-201ENST00000340001 NUP133Q8WUM0 1156 aa8.74□□□□□ -1.01
ABCA9-201ENST00000340001 IPO7O95373 1038 aaKnown RBP8.73□□□□□ -1.01
ABCA9-201ENST00000340001 WDHD1O75717 1129 aaPredicted RBP8.73□□□□□ -1.01
ABCA9-201ENST00000340001 CABP4P57796 275 aa8.73□□□□□ -1.01
ABCA9-201ENST00000340001 TCP11L2Q8N4U5 519 aa8.73□□□□□ -1.01
ABCA9-201ENST00000340001 TXNDC2Q86VQ3 553 aa8.73□□□□□ -1.01
ABCA9-201ENST00000340001 ANKRD50Q9ULJ7 1429 aa8.73□□□□□ -1.01
ABCA9-201ENST00000340001 ZNF76P36508 570 aa8.73□□□□□ -1.01
ABCA9-201ENST00000340001 SLC12A5Q9H2X9 1139 aa8.73□□□□□ -1.01
ABCA9-201ENST00000340001 PDZRN3Q9UPQ7 1066 aa8.72□□□□□ -1.01
ABCA9-201ENST00000340001 PTCD1O75127 700 aaKnown RBP8.72□□□□□ -1.01
ABCA9-201ENST00000340001 SLC26A8Q96RN1 970 aa8.72□□□□□ -1.01
ABCA9-201ENST00000340001 ZMYND15Q9H091 742 aa8.72□□□□□ -1.01
ABCA9-201ENST00000340001 PRKAR2BP31323 418 aa8.72□□□□□ -1.01
ABCA9-201ENST00000340001 PRAM1Q96QH2 718 aa8.72□□□□□ -1.01
ABCA9-201ENST00000340001 KIF3AQ9Y496 699 aa8.72□□□□□ -1.01
ABCA9-201ENST00000340001 KAT6BQ8WYB5 2073 aa8.72□□□□□ -1.01
ABCA9-201ENST00000340001 SYCP1Q15431 976 aa8.72□□□□□ -1.01
ABCA9-201ENST00000340001 DRC1Q96MC2 740 aa8.72□□□□□ -1.01
ABCA9-201ENST00000340001 FMNL2Q96PY5 1086 aa8.72□□□□□ -1.01
ABCA9-201ENST00000340001 TTC39AQ5SRH9 613 aa8.72□□□□□ -1.01
ABCA9-201ENST00000340001 PRDM11Q9NQV5 511 aa8.72□□□□□ -1.01
ABCA9-201ENST00000340001 CBX1P83916 185 aa8.71□□□□□ -1.01
ABCA9-201ENST00000340001 CIZ1Q9ULV3 898 aaPredicted RBP8.71□□□□□ -1.01
ABCA9-201ENST00000340001 MAP3K9P80192 1104 aa8.71□□□□□ -1.01
ABCA9-201ENST00000340001 STK3Q13188 491 aa8.71□□□□□ -1.01
ABCA9-201ENST00000340001 SMC3Q9UQE7 1217 aa8.71□□□□□ -1.01
ABCA9-201ENST00000340001 INTS3Q68E01 1043 aaKnown RBP8.71□□□□□ -1.02
ABCA9-201ENST00000340001 CALRP27797 417 aaKnown RBP8.71□□□□□ -1.02
ABCA9-201ENST00000340001 RRS1Q15050 365 aaKnown RBP8.71□□□□□ -1.02
ABCA9-201ENST00000340001 ZNF526Q8TF50 670 aaPredicted RBP8.71□□□□□ -1.02
ABCA9-201ENST00000340001 MYCP01106 439 aaPredicted RBP8.71□□□□□ -1.02
ABCA9-201ENST00000340001 SAFBQ15424 915 aaKnown RBP eCLIP8.71□□□□□ -1.02
ABCA9-201ENST00000340001 CAVIN1Q6NZI2 390 aaKnown RBP8.71□□□□□ -1.02
ABCA9-201ENST00000340001 MIS18AQ9NYP9 233 aa8.71□□□□□ -1.02
ABCA9-201ENST00000340001 REC8O95072 547 aa8.7□□□□□ -1.02
ABCA9-201ENST00000340001 CHMP5Q9NZZ3 219 aa8.7□□□□□ -1.02
ABCA9-201ENST00000340001 MPHOSPH8Q99549 860 aa8.7□□□□□ -1.02
ABCA9-201ENST00000340001 CHMP4AQ9BY43 222 aa8.7□□□□□ -1.02
ABCA9-201ENST00000340001 ANKIB1Q9P2G1 1089 aa8.7□□□□□ -1.02
ABCA9-201ENST00000340001 ANKRD20A12PQ8NF67 263 aa8.7□□□□□ -1.02
ABCA9-201ENST00000340001 TANGO6Q9C0B7 1094 aa8.7□□□□□ -1.02
ABCA9-201ENST00000340001 ABCF2Q9UG63 623 aa8.7□□□□□ -1.02
ABCA9-201ENST00000340001 ZKSCAN1P17029 563 aaPredicted RBP8.7□□□□□ -1.02
ABCA9-201ENST00000340001 FKBP4Q02790 459 aaKnown RBP eCLIP8.7□□□□□ -1.02
ABCA9-201ENST00000340001 LRRFIP1Q32MZ4 808 aaKnown RBP8.7□□□□□ -1.02
ABCA9-201ENST00000340001 UBTFL1P0CB47 393 aaPredicted RBP8.69□□□□□ -1.02
ABCA9-201ENST00000340001 CDK13Q14004 1512 aaKnown RBP8.69□□□□□ -1.02
ABCA9-201ENST00000340001 PRG4Q92954 1404 aaPredicted RBP8.69□□□□□ -1.02
ABCA9-201ENST00000340001 DHX8Q14562 1220 aaKnown RBP8.69□□□□□ -1.02
ABCA9-201ENST00000340001 CCDC70Q6NSX1 233 aa8.69□□□□□ -1.02
ABCA9-201ENST00000340001 API5Q9BZZ5 524 aaKnown RBP8.69□□□□□ -1.02
ABCA9-201ENST00000340001 HSP90AB4PQ58FF6 505 aa8.69□□□□□ -1.02
ABCA9-201ENST00000340001 ZNF771Q7L3S4 317 aaPredicted RBP8.69□□□□□ -1.02
ABCA9-201ENST00000340001 TBC1D2BQ9UPU7 963 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms