RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 CPSF1Q10570 1443 aaKnown RBP9.75□□□□□ -0.85
SRFBP1-201ENST00000339397 SHPRHQ149N8 1683 aa9.75□□□□□ -0.85
SRFBP1-201ENST00000339397 ARHGAP23Q9P227 1491 aa9.75□□□□□ -0.85
SRFBP1-201ENST00000339397 CFAP53Q96M91 514 aa9.75□□□□□ -0.85
SRFBP1-201ENST00000339397 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.75□□□□□ -0.85
SRFBP1-201ENST00000339397 USP32Q8NFA0 1604 aa9.75□□□□□ -0.85
SRFBP1-201ENST00000339397 RUNDC1Q96C34 613 aa9.75□□□□□ -0.85
SRFBP1-201ENST00000339397 SLIT1O75093 1534 aa9.74□□□□□ -0.85
SRFBP1-201ENST00000339397 TRMT2AQ8IZ69 625 aaKnown RBP9.74□□□□□ -0.85
SRFBP1-201ENST00000339397 ACEP12821 1306 aa9.74□□□□□ -0.85
SRFBP1-201ENST00000339397 CPS1P31327 1500 aa9.74□□□□□ -0.85
SRFBP1-201ENST00000339397 RIMS1Q86UR5 1692 aaKnown RBP9.74□□□□□ -0.85
SRFBP1-201ENST00000339397 SOX12O15370 315 aa9.74□□□□□ -0.85
SRFBP1-201ENST00000339397 ERICH6BQ5W0A0 696 aa9.73□□□□□ -0.85
SRFBP1-201ENST00000339397 ATP7BP35670 1465 aa9.73□□□□□ -0.85
SRFBP1-201ENST00000339397 BCAR3O75815 825 aa9.73□□□□□ -0.85
SRFBP1-201ENST00000339397 PLEKHF1Q96S99 279 aa9.73□□□□□ -0.85
SRFBP1-201ENST00000339397 HMOX1P09601 288 aa9.72□□□□□ -0.85
SRFBP1-201ENST00000339397 CCDC136Q96JN2 1154 aa9.72□□□□□ -0.85
SRFBP1-201ENST00000339397 DIAPH1O60610 1272 aaKnown RBP9.72□□□□□ -0.85
SRFBP1-201ENST00000339397 ANKLE2Q86XL3 938 aa9.71□□□□□ -0.85
SRFBP1-201ENST00000339397 CRBNQ96SW2 442 aa9.71□□□□□ -0.86
SRFBP1-201ENST00000339397 COL3A1P02461 1466 aaPredicted RBP9.71□□□□□ -0.86
SRFBP1-201ENST00000339397 EDC4Q6P2E9 1401 aaKnown RBP9.71□□□□□ -0.86
SRFBP1-201ENST00000339397 CEP170BQ9Y4F5 1589 aaPredicted RBP9.7□□□□□ -0.86
SRFBP1-201ENST00000339397 COG3Q96JB2 828 aa9.7□□□□□ -0.86
SRFBP1-201ENST00000339397 NKTRP30414 1462 aaKnown RBP9.7□□□□□ -0.86
SRFBP1-201ENST00000339397 PNPLA6Q8IY17 1366 aa9.7□□□□□ -0.86
SRFBP1-201ENST00000339397 TTC21BQ7Z4L5 1316 aa9.7□□□□□ -0.86
SRFBP1-201ENST00000339397 KNDC1Q76NI1 1749 aa9.7□□□□□ -0.86
SRFBP1-201ENST00000339397 E9PSI1 815 aa9.7□□□□□ -0.86
SRFBP1-201ENST00000339397 NUTM2GQ5VZR2 741 aa9.7□□□□□ -0.86
SRFBP1-201ENST00000339397 PHACTR3Q96KR7 559 aa9.7□□□□□ -0.86
SRFBP1-201ENST00000339397 PLEKHG3A1L390 1219 aa9.69□□□□□ -0.86
SRFBP1-201ENST00000339397 TMPOP42166 694 aaKnown RBP9.69□□□□□ -0.86
SRFBP1-201ENST00000339397 SKAP1Q86WV1 359 aa9.69□□□□□ -0.86
SRFBP1-201ENST00000339397 ZNF692Q9BU19 519 aaPredicted RBP9.69□□□□□ -0.86
SRFBP1-201ENST00000339397 TRIM35Q9UPQ4 493 aa9.69□□□□□ -0.86
SRFBP1-201ENST00000339397 TSR2Q969E8 191 aaKnown RBP9.69□□□□□ -0.86
SRFBP1-201ENST00000339397 IQSEC2Q5JU85 1478 aa9.68□□□□□ -0.86
SRFBP1-201ENST00000339397 NCBP3Q53F19 620 aaKnown RBP9.68□□□□□ -0.86
SRFBP1-201ENST00000339397 NGDNQ8NEJ9 315 aaKnown RBP9.68□□□□□ -0.86
SRFBP1-201ENST00000339397 BCL2L13Q9BXK5 485 aa9.68□□□□□ -0.86
SRFBP1-201ENST00000339397 MAP2P11137 1827 aaKnown RBP9.68□□□□□ -0.86
SRFBP1-201ENST00000339397 CDC42BPGQ6DT37 1551 aa9.68□□□□□ -0.86
SRFBP1-201ENST00000339397 PRKAR2BP31323 418 aa9.68□□□□□ -0.86
SRFBP1-201ENST00000339397 KDM4FA0A1W2PPD8 638 aa9.67□□□□□ -0.86
SRFBP1-201ENST00000339397 IL13P35225 146 aa9.67□□□□□ -0.86
SRFBP1-201ENST00000339397 ADAMTSL3P82987 1691 aa9.67□□□□□ -0.86
SRFBP1-201ENST00000339397 RGPD8O14715 1765 aaPredicted RBP9.67□□□□□ -0.86
SRFBP1-201ENST00000339397 RIPK4P57078 832 aa9.67□□□□□ -0.86
SRFBP1-201ENST00000339397 THUMPD2Q9BTF0 503 aaKnown RBP9.67□□□□□ -0.86
SRFBP1-201ENST00000339397 RSPH6AQ9H0K4 717 aa9.67□□□□□ -0.86
SRFBP1-201ENST00000339397 KIF20BQ96Q89 1820 aa9.67□□□□□ -0.86
SRFBP1-201ENST00000339397 HSP90AB2PQ58FF8 381 aa9.66□□□□□ -0.86
SRFBP1-201ENST00000339397 TNNQ9UQP3 1299 aa9.66□□□□□ -0.86
SRFBP1-201ENST00000339397 AEBP1Q8IUX7 1158 aa9.66□□□□□ -0.86
SRFBP1-201ENST00000339397 RBM19Q9Y4C8 960 aaKnown RBP9.66□□□□□ -0.86
SRFBP1-201ENST00000339397 USP6P35125 1406 aa9.66□□□□□ -0.86
SRFBP1-201ENST00000339397 PLEKHG5O94827 1062 aa9.65□□□□□ -0.86
SRFBP1-201ENST00000339397 PTCH1Q13635 1447 aa9.65□□□□□ -0.86
SRFBP1-201ENST00000339397 ANKRD26Q9UPS8 1709 aa9.65□□□□□ -0.86
SRFBP1-201ENST00000339397 MAPK8IP3Q9UPT6 1336 aa9.65□□□□□ -0.86
SRFBP1-201ENST00000339397 WDR63Q8IWG1 891 aa9.65□□□□□ -0.86
SRFBP1-201ENST00000339397 SETD1BQ9UPS6 1966 aaKnown RBP9.65□□□□□ -0.86
SRFBP1-201ENST00000339397 FCHSD2O94868 740 aa9.65□□□□□ -0.87
SRFBP1-201ENST00000339397 CCDC27Q2M243 656 aa9.65□□□□□ -0.87
SRFBP1-201ENST00000339397 ZBTB22O15209 634 aa9.64□□□□□ -0.87
SRFBP1-201ENST00000339397 PAK3O75914 559 aaPredicted RBP9.64□□□□□ -0.87
SRFBP1-201ENST00000339397 NGEFQ8N5V2 710 aa9.64□□□□□ -0.87
SRFBP1-201ENST00000339397 FRAT1Q92837 279 aaPredicted RBP9.64□□□□□ -0.87
SRFBP1-201ENST00000339397 DIP2AQ14689 1571 aa9.64□□□□□ -0.87
SRFBP1-201ENST00000339397 HSPA2P54652 639 aa9.64□□□□□ -0.87
SRFBP1-201ENST00000339397 EIF4A2Q14240 407 aaKnown RBP9.64□□□□□ -0.87
SRFBP1-201ENST00000339397 PANK1Q8TE04 598 aa9.64□□□□□ -0.87
SRFBP1-201ENST00000339397 ADGRB2O60241 1585 aa9.64□□□□□ -0.87
SRFBP1-201ENST00000339397 SSH2Q76I76 1423 aa9.63□□□□□ -0.87
SRFBP1-201ENST00000339397 MON2Q7Z3U7 1717 aa9.63□□□□□ -0.87
SRFBP1-201ENST00000339397 FAM83GA6ND36 823 aa9.63□□□□□ -0.87
SRFBP1-201ENST00000339397 RARSP54136 660 aaKnown RBP9.63□□□□□ -0.87
SRFBP1-201ENST00000339397 XPCQ01831 940 aaPredicted RBP9.63□□□□□ -0.87
SRFBP1-201ENST00000339397 AKAP12Q02952 1782 aa9.63□□□□□ -0.87
SRFBP1-201ENST00000339397 NLRP6P59044 892 aa9.63□□□□□ -0.87
SRFBP1-201ENST00000339397 DCTN1Q14203 1278 aa9.63□□□□□ -0.87
SRFBP1-201ENST00000339397 LAS1LQ9Y4W2 734 aaKnown RBP9.63□□□□□ -0.87
SRFBP1-201ENST00000339397 XRN1Q8IZH2 1706 aaKnown RBP9.63□□□□□ -0.87
SRFBP1-201ENST00000339397 AATKQ6ZMQ8 1374 aa9.63□□□□□ -0.87
SRFBP1-201ENST00000339397 EXOSC9Q06265 439 aaKnown RBP9.62□□□□□ -0.87
SRFBP1-201ENST00000339397 C14orf37Q86TY3 774 aa9.62□□□□□ -0.87
SRFBP1-201ENST00000339397 FANCIQ9NVI1 1328 aa9.62□□□□□ -0.87
SRFBP1-201ENST00000339397 ESCO1Q5FWF5 840 aa9.62□□□□□ -0.87
SRFBP1-201ENST00000339397 SULT6B1Q6IMI4 303 aa9.62□□□□□ -0.87
SRFBP1-201ENST00000339397 CLUAP1Q96AJ1 413 aa9.62□□□□□ -0.87
SRFBP1-201ENST00000339397 ORAI2Q96SN7 254 aa9.62□□□□□ -0.87
SRFBP1-201ENST00000339397 MAP3K19Q56UN5 1328 aa9.62□□□□□ -0.87
SRFBP1-201ENST00000339397 RLBP1P12271 317 aa9.61□□□□□ -0.87
SRFBP1-201ENST00000339397 ABTB2Q8N961 1025 aa9.61□□□□□ -0.87
SRFBP1-201ENST00000339397 OVOS2A0A0J9YW53 1432 aa9.61□□□□□ -0.87
SRFBP1-201ENST00000339397 OVOS2Q6IE36 1432 aa9.61□□□□□ -0.87
SRFBP1-201ENST00000339397 LRRC7Q96NW7 1537 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms