RNA–Protein interactions for RNA: ENST00000339113.8

ATAD3A-201, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2

Gene ATAD3A, Length 2,330 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-201ENST00000339113 ACEP12821 1306 aa22.6■■□□□ 1.21
ATAD3A-201ENST00000339113 PLEKHG3A1L390 1219 aa22.59■■□□□ 1.21
ATAD3A-201ENST00000339113 GOLGA2Q08379 1002 aa22.59■■□□□ 1.21
ATAD3A-201ENST00000339113 RUNDC1Q96C34 613 aa22.59■■□□□ 1.21
ATAD3A-201ENST00000339113 PIK3R4Q99570 1358 aa22.59■■□□□ 1.21
ATAD3A-201ENST00000339113 COL3A1P02461 1466 aaPredicted RBP22.59■■□□□ 1.21
ATAD3A-201ENST00000339113 U2AF1L5P0DN76 240 aaPredicted RBP22.58■■□□□ 1.21
ATAD3A-201ENST00000339113 U2AF1Q01081 240 aaKnown RBP eCLIP22.58■■□□□ 1.21
ATAD3A-201ENST00000339113 DUSP27Q5VZP5 1158 aa22.58■■□□□ 1.21
ATAD3A-201ENST00000339113 SPINK5Q9NQ38 1064 aaPredicted RBP22.58■■□□□ 1.21
ATAD3A-201ENST00000339113 NKTRP30414 1462 aaKnown RBP22.58■■□□□ 1.2
ATAD3A-201ENST00000339113 POLKQ9UBT6 870 aa22.58■■□□□ 1.2
ATAD3A-201ENST00000339113 DMRT2Q9Y5R5 561 aa22.58■■□□□ 1.2
ATAD3A-201ENST00000339113 MON2Q7Z3U7 1717 aa22.57■■□□□ 1.2
ATAD3A-201ENST00000339113 TCP11L2Q8N4U5 519 aa22.56■■□□□ 1.2
ATAD3A-201ENST00000339113 RRP7AQ9Y3A4 280 aaKnown RBP22.56■■□□□ 1.2
ATAD3A-201ENST00000339113 AKAP12Q02952 1782 aa22.56■■□□□ 1.2
ATAD3A-201ENST00000339113 PNPLA6Q8IY17 1366 aa22.56■■□□□ 1.2
ATAD3A-201ENST00000339113 SLFN5Q08AF3 891 aa22.56■■□□□ 1.2
ATAD3A-201ENST00000339113 TOPAZ1Q8N9V7 1692 aa22.55■■□□□ 1.2
ATAD3A-201ENST00000339113 NEUROD2Q15784 382 aa22.55■■□□□ 1.2
ATAD3A-201ENST00000339113 PMFBP1Q8TBY8 1022 aa22.55■■□□□ 1.2
ATAD3A-201ENST00000339113 U2SURPO15042 1029 aaKnown RBP22.54■■□□□ 1.2
ATAD3A-201ENST00000339113 PPM1GO15355 546 aaPredicted RBP22.54■■□□□ 1.2
ATAD3A-201ENST00000339113 RRP1P56182 461 aaKnown RBP22.54■■□□□ 1.2
ATAD3A-201ENST00000339113 RBM33Q96EV2 1170 aaKnown RBP22.54■■□□□ 1.2
ATAD3A-201ENST00000339113 PPP4R2Q9NY27 417 aa22.54■■□□□ 1.2
ATAD3A-201ENST00000339113 WWC1Q8IX03 1113 aa22.53■■□□□ 1.2
ATAD3A-201ENST00000339113 TRMT2AQ8IZ69 625 aaKnown RBP22.53■■□□□ 1.2
ATAD3A-201ENST00000339113 TTC21BQ7Z4L5 1316 aa22.53■■□□□ 1.2
ATAD3A-201ENST00000339113 ITSN1Q15811 1721 aa22.53■■□□□ 1.2
ATAD3A-201ENST00000339113 COG3Q96JB2 828 aa22.53■■□□□ 1.2
ATAD3A-201ENST00000339113 EMILIN1Q9Y6C2 1016 aa22.53■■□□□ 1.2
ATAD3A-201ENST00000339113 DIAPH1O60610 1272 aaKnown RBP22.52■■□□□ 1.2
ATAD3A-201ENST00000339113 NGEFQ8N5V2 710 aa22.52■■□□□ 1.2
ATAD3A-201ENST00000339113 IQSEC2Q5JU85 1478 aa22.52■■□□□ 1.2
ATAD3A-201ENST00000339113 NPHP4O75161 1426 aaPredicted RBP22.5■■□□□ 1.19
ATAD3A-201ENST00000339113 USP6P35125 1406 aa22.5■■□□□ 1.19
ATAD3A-201ENST00000339113 CHD2O14647 1828 aaKnown RBP22.5■■□□□ 1.19
ATAD3A-201ENST00000339113 PLEKHF1Q96S99 279 aa22.49■■□□□ 1.19
ATAD3A-201ENST00000339113 MSH5O43196 834 aa22.49■■□□□ 1.19
ATAD3A-201ENST00000339113 RRS1Q15050 365 aaKnown RBP22.48■■□□□ 1.19
ATAD3A-201ENST00000339113 PHF23Q9BUL5 403 aaPredicted RBP22.48■■□□□ 1.19
ATAD3A-201ENST00000339113 RGPD8O14715 1765 aaPredicted RBP22.48■■□□□ 1.19
ATAD3A-201ENST00000339113 B4GALNT3Q6L9W6 998 aa22.47■■□□□ 1.19
ATAD3A-201ENST00000339113 SSH2Q76I76 1423 aa22.47■■□□□ 1.19
ATAD3A-201ENST00000339113 NRKQ7Z2Y5 1582 aa22.47■■□□□ 1.19
ATAD3A-201ENST00000339113 AATKQ6ZMQ8 1374 aa22.47■■□□□ 1.19
ATAD3A-201ENST00000339113 MAP2P11137 1827 aaKnown RBP22.47■■□□□ 1.19
ATAD3A-201ENST00000339113 E9PSI1 815 aa22.46■■□□□ 1.19
ATAD3A-201ENST00000339113 PLIN1O60240 522 aa22.46■■□□□ 1.19
ATAD3A-201ENST00000339113 NGDNQ8NEJ9 315 aaKnown RBP22.46■■□□□ 1.19
ATAD3A-201ENST00000339113 BCL11AQ9H165 835 aa22.45■■□□□ 1.18
ATAD3A-201ENST00000339113 CCDC27Q2M243 656 aa22.42■■□□□ 1.18
ATAD3A-201ENST00000339113 OVOS2A0A0J9YW53 1432 aa22.42■■□□□ 1.18
ATAD3A-201ENST00000339113 OVOS2Q6IE36 1432 aa22.42■■□□□ 1.18
ATAD3A-201ENST00000339113 ANKARQ7Z5J8 1434 aa22.42■■□□□ 1.18
ATAD3A-201ENST00000339113 IL13P35225 146 aa22.41■■□□□ 1.18
ATAD3A-201ENST00000339113 NALCNQ8IZF0 1738 aa22.41■■□□□ 1.18
ATAD3A-201ENST00000339113 FMN2Q9NZ56 1722 aa22.41■■□□□ 1.18
ATAD3A-201ENST00000339113 TMPOP42166 694 aaKnown RBP22.4■■□□□ 1.18
ATAD3A-201ENST00000339113 EXOC6Q8TAG9 804 aa22.4■■□□□ 1.18
ATAD3A-201ENST00000339113 CDK12Q9NYV4 1490 aaPredicted RBP22.4■■□□□ 1.18
ATAD3A-201ENST00000339113 WDR63Q8IWG1 891 aa22.39■■□□□ 1.17
ATAD3A-201ENST00000339113 FCHSD2O94868 740 aa22.39■■□□□ 1.17
ATAD3A-201ENST00000339113 RSPH6AQ9H0K4 717 aa22.39■■□□□ 1.17
ATAD3A-201ENST00000339113 TTC21AQ8NDW8 1320 aa22.38■■□□□ 1.17
ATAD3A-201ENST00000339113 HMOX1P09601 288 aa22.38■■□□□ 1.17
ATAD3A-201ENST00000339113 NCBP3Q53F19 620 aaKnown RBP22.38■■□□□ 1.17
ATAD3A-201ENST00000339113 TRIM35Q9UPQ4 493 aa22.37■■□□□ 1.17
ATAD3A-201ENST00000339113 MAPK8IP3Q9UPT6 1336 aa22.37■■□□□ 1.17
ATAD3A-201ENST00000339113 SOX12O15370 315 aa22.37■■□□□ 1.17
ATAD3A-201ENST00000339113 PRKAR2BP31323 418 aa22.36■■□□□ 1.17
ATAD3A-201ENST00000339113 USP31Q70CQ4 1352 aa22.36■■□□□ 1.17
ATAD3A-201ENST00000339113 ADGRL3Q9HAR2 1447 aa22.35■■□□□ 1.17
ATAD3A-201ENST00000339113 C20orf194Q5TEA3 1177 aa22.35■■□□□ 1.17
ATAD3A-201ENST00000339113 LRRC7Q96NW7 1537 aa22.35■■□□□ 1.17
ATAD3A-201ENST00000339113 PHACTR3Q96KR7 559 aa22.34■■□□□ 1.17
ATAD3A-201ENST00000339113 PHF8Q9UPP1 1060 aa22.34■■□□□ 1.17
ATAD3A-201ENST00000339113 RIPK4P57078 832 aa22.33■■□□□ 1.17
ATAD3A-201ENST00000339113 C14orf37Q86TY3 774 aa22.33■■□□□ 1.17
ATAD3A-201ENST00000339113 PNNQ9H307 717 aaKnown RBP22.33■■□□□ 1.17
ATAD3A-201ENST00000339113 BCAR3O75815 825 aa22.32■■□□□ 1.16
ATAD3A-201ENST00000339113 HSPA2P54652 639 aa22.32■■□□□ 1.16
ATAD3A-201ENST00000339113 NUTM2GQ5VZR2 741 aa22.32■■□□□ 1.16
ATAD3A-201ENST00000339113 CCDC136Q96JN2 1154 aa22.32■■□□□ 1.16
ATAD3A-201ENST00000339113 EIF4A2Q14240 407 aaKnown RBP22.31■■□□□ 1.16
ATAD3A-201ENST00000339113 HSP90AB2PQ58FF8 381 aa22.31■■□□□ 1.16
ATAD3A-201ENST00000339113 NLRP6P59044 892 aa22.3■■□□□ 1.16
ATAD3A-201ENST00000339113 PROSER2Q86WR7 435 aaPredicted RBP22.3■■□□□ 1.16
ATAD3A-201ENST00000339113 CRBNQ96SW2 442 aa22.3■■□□□ 1.16
ATAD3A-201ENST00000339113 PIK3C2AO00443 1686 aa22.3■■□□□ 1.16
ATAD3A-201ENST00000339113 ESCO1Q5FWF5 840 aa22.3■■□□□ 1.16
ATAD3A-201ENST00000339113 NWD1Q149M9 1564 aa22.29■■□□□ 1.16
ATAD3A-201ENST00000339113 MAP3K19Q56UN5 1328 aa22.29■■□□□ 1.16
ATAD3A-201ENST00000339113 PEAK1Q9H792 1746 aa22.29■■□□□ 1.16
ATAD3A-201ENST00000339113 PAK3O75914 559 aaPredicted RBP22.29■■□□□ 1.16
ATAD3A-201ENST00000339113 KDM4FA0A1W2PPD8 638 aa22.28■■□□□ 1.16
ATAD3A-201ENST00000339113 ABTB2Q8N961 1025 aa22.27■■□□□ 1.16
ATAD3A-201ENST00000339113 TSR2Q969E8 191 aaKnown RBP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms