RNA–Protein interactions for RNA: ENST00000338663.11

SLC3A2-201, Transcript of solute carrier family 3 member 2, humanhuman

TSL 1 (best) BASIC

Gene SLC3A2, Length 1,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-201ENST00000338663 MTHFSP49914 203 aa22.86■■□□□ 1.25
SLC3A2-201ENST00000338663 RGPD8O14715 1765 aaPredicted RBP22.86■■□□□ 1.25
SLC3A2-201ENST00000338663 CFAP53Q96M91 514 aa22.84■■□□□ 1.25
SLC3A2-201ENST00000338663 PDE3BQ13370 1112 aa22.82■■□□□ 1.24
SLC3A2-201ENST00000338663 NWD1Q149M9 1564 aa22.82■■□□□ 1.24
SLC3A2-201ENST00000338663 B4GALNT3Q6L9W6 998 aa22.82■■□□□ 1.24
SLC3A2-201ENST00000338663 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.82■■□□□ 1.24
SLC3A2-201ENST00000338663 COL3A1P02461 1466 aaPredicted RBP22.82■■□□□ 1.24
SLC3A2-201ENST00000338663 ZNF692Q9BU19 519 aaPredicted RBP22.81■■□□□ 1.24
SLC3A2-201ENST00000338663 SALL2Q9Y467 1007 aaPredicted RBP22.8■■□□□ 1.24
SLC3A2-201ENST00000338663 ANKARQ7Z5J8 1434 aa22.8■■□□□ 1.24
SLC3A2-201ENST00000338663 PLEKHG3A1L390 1219 aa22.8■■□□□ 1.24
SLC3A2-201ENST00000338663 NOP58Q9Y2X3 529 aaKnown RBP22.79■■□□□ 1.24
SLC3A2-201ENST00000338663 MAP2P11137 1827 aaKnown RBP22.79■■□□□ 1.24
SLC3A2-201ENST00000338663 USP6P35125 1406 aa22.77■■□□□ 1.24
SLC3A2-201ENST00000338663 ACEP12821 1306 aa22.77■■□□□ 1.23
SLC3A2-201ENST00000338663 NUTM2FA1L443 756 aa22.76■■□□□ 1.23
SLC3A2-201ENST00000338663 CCDC146Q8IYE0 955 aa22.76■■□□□ 1.23
SLC3A2-201ENST00000338663 NME9Q86XW9 330 aa22.75■■□□□ 1.23
SLC3A2-201ENST00000338663 IQSEC2Q5JU85 1478 aa22.74■■□□□ 1.23
SLC3A2-201ENST00000338663 PNPLA6Q8IY17 1366 aa22.74■■□□□ 1.23
SLC3A2-201ENST00000338663 ADGRL3Q9HAR2 1447 aa22.73■■□□□ 1.23
SLC3A2-201ENST00000338663 ZNF521Q96K83 1311 aa22.73■■□□□ 1.23
SLC3A2-201ENST00000338663 SSH2Q76I76 1423 aa22.72■■□□□ 1.23
SLC3A2-201ENST00000338663 AATKQ6ZMQ8 1374 aa22.72■■□□□ 1.23
SLC3A2-201ENST00000338663 NGEFQ8N5V2 710 aa22.71■■□□□ 1.23
SLC3A2-201ENST00000338663 TTC21BQ7Z4L5 1316 aa22.71■■□□□ 1.23
SLC3A2-201ENST00000338663 CDK12Q9NYV4 1490 aaPredicted RBP22.7■■□□□ 1.22
SLC3A2-201ENST00000338663 APAF1O14727 1248 aa22.7■■□□□ 1.22
SLC3A2-201ENST00000338663 COG3Q96JB2 828 aa22.7■■□□□ 1.22
SLC3A2-201ENST00000338663 OVOS2A0A0J9YW53 1432 aa22.7■■□□□ 1.22
SLC3A2-201ENST00000338663 OVOS2Q6IE36 1432 aa22.7■■□□□ 1.22
SLC3A2-201ENST00000338663 CDCA7LQ96GN5 454 aa22.69■■□□□ 1.22
SLC3A2-201ENST00000338663 DEKP35659 375 aaKnown RBP22.68■■□□□ 1.22
SLC3A2-201ENST00000338663 ANP32AP39687 249 aaKnown RBP22.68■■□□□ 1.22
SLC3A2-201ENST00000338663 RUNDC1Q96C34 613 aa22.68■■□□□ 1.22
SLC3A2-201ENST00000338663 ZRANB1Q9UGI0 708 aa22.68■■□□□ 1.22
SLC3A2-201ENST00000338663 CCDC136Q96JN2 1154 aa22.67■■□□□ 1.22
SLC3A2-201ENST00000338663 POLKQ9UBT6 870 aa22.67■■□□□ 1.22
SLC3A2-201ENST00000338663 PIK3C2AO00443 1686 aa22.67■■□□□ 1.22
SLC3A2-201ENST00000338663 PMFBP1Q8TBY8 1022 aa22.66■■□□□ 1.22
SLC3A2-201ENST00000338663 TTC21AQ8NDW8 1320 aa22.66■■□□□ 1.22
SLC3A2-201ENST00000338663 USP54Q70EL1 1684 aa22.66■■□□□ 1.22
SLC3A2-201ENST00000338663 U2AF1L5P0DN76 240 aaPredicted RBP22.65■■□□□ 1.22
SLC3A2-201ENST00000338663 U2AF1Q01081 240 aaKnown RBP eCLIP22.65■■□□□ 1.222e-23■□□□□ 11.2
SLC3A2-201ENST00000338663 IPO9Q96P70 1041 aaKnown RBP22.65■■□□□ 1.22
SLC3A2-201ENST00000338663 DIAPH1O60610 1272 aaKnown RBP22.64■■□□□ 1.21
SLC3A2-201ENST00000338663 NGDNQ8NEJ9 315 aaKnown RBP22.64■■□□□ 1.21
SLC3A2-201ENST00000338663 GOLGA2Q08379 1002 aa22.63■■□□□ 1.21
SLC3A2-201ENST00000338663 FBLN1P23142 703 aa22.62■■□□□ 1.21
SLC3A2-201ENST00000338663 STRCP1A6NGW2 1772 aa22.62■■□□□ 1.21
SLC3A2-201ENST00000338663 MARF1Q9Y4F3 1742 aaKnown RBP22.61■■□□□ 1.21
SLC3A2-201ENST00000338663 KDM4FA0A1W2PPD8 638 aa22.61■■□□□ 1.21
SLC3A2-201ENST00000338663 USP31Q70CQ4 1352 aa22.61■■□□□ 1.21
SLC3A2-201ENST00000338663 U2SURPO15042 1029 aaKnown RBP22.61■■□□□ 1.21
SLC3A2-201ENST00000338663 RBM33Q96EV2 1170 aaKnown RBP22.61■■□□□ 1.21
SLC3A2-201ENST00000338663 EMILIN1Q9Y6C2 1016 aa22.61■■□□□ 1.21
SLC3A2-201ENST00000338663 LRRC7Q96NW7 1537 aa22.6■■□□□ 1.21
SLC3A2-201ENST00000338663 LMTK3Q96Q04 1460 aa22.6■■□□□ 1.21
SLC3A2-201ENST00000338663 TCP11L2Q8N4U5 519 aa22.6■■□□□ 1.21
SLC3A2-201ENST00000338663 RCAN3Q9UKA8 241 aa22.6■■□□□ 1.21
SLC3A2-201ENST00000338663 PPM1GO15355 546 aaPredicted RBP22.59■■□□□ 1.21
SLC3A2-201ENST00000338663 NCBP3Q53F19 620 aaKnown RBP22.59■■□□□ 1.21
SLC3A2-201ENST00000338663 DUSP27Q5VZP5 1158 aa22.59■■□□□ 1.21
SLC3A2-201ENST00000338663 PEAK1Q9H792 1746 aa22.58■■□□□ 1.2
SLC3A2-201ENST00000338663 SLFN5Q08AF3 891 aa22.57■■□□□ 1.2
SLC3A2-201ENST00000338663 PLEKHF1Q96S99 279 aa22.57■■□□□ 1.2
SLC3A2-201ENST00000338663 PHF23Q9BUL5 403 aaPredicted RBP22.57■■□□□ 1.2
SLC3A2-201ENST00000338663 RRS1Q15050 365 aaKnown RBP22.56■■□□□ 1.2
SLC3A2-201ENST00000338663 C14orf37Q86TY3 774 aa22.56■■□□□ 1.2
SLC3A2-201ENST00000338663 WWC1Q8IX03 1113 aa22.56■■□□□ 1.2
SLC3A2-201ENST00000338663 PHF8Q9UPP1 1060 aa22.56■■□□□ 1.2
SLC3A2-201ENST00000338663 STRCQ7RTU9 1775 aa22.56■■□□□ 1.2
SLC3A2-201ENST00000338663 CCDC27Q2M243 656 aa22.55■■□□□ 1.2
SLC3A2-201ENST00000338663 TRMT2AQ8IZ69 625 aaKnown RBP22.55■■□□□ 1.2
SLC3A2-201ENST00000338663 E9PSI1 815 aa22.54■■□□□ 1.2
SLC3A2-201ENST00000338663 HSPA2P54652 639 aa22.54■■□□□ 1.2
SLC3A2-201ENST00000338663 PROSER2Q86WR7 435 aaPredicted RBP22.54■■□□□ 1.2
SLC3A2-201ENST00000338663 ZBTB47Q9UFB7 747 aaPredicted RBP22.54■■□□□ 1.2
SLC3A2-201ENST00000338663 KIF1AQ12756 1690 aa22.54■■□□□ 1.2
SLC3A2-201ENST00000338663 PNNQ9H307 717 aaKnown RBP22.53■■□□□ 1.2
SLC3A2-201ENST00000338663 RRP7AQ9Y3A4 280 aaKnown RBP22.53■■□□□ 1.2
SLC3A2-201ENST00000338663 RRP1P56182 461 aaKnown RBP22.53■■□□□ 1.2
SLC3A2-201ENST00000338663 MAPK8IP3Q9UPT6 1336 aa22.52■■□□□ 1.2
SLC3A2-201ENST00000338663 IL13P35225 146 aa22.52■■□□□ 1.2
SLC3A2-201ENST00000338663 PAK3O75914 559 aaPredicted RBP22.51■■□□□ 1.19
SLC3A2-201ENST00000338663 NEUROD2Q15784 382 aa22.51■■□□□ 1.19
SLC3A2-201ENST00000338663 SPINK5Q9NQ38 1064 aaPredicted RBP22.51■■□□□ 1.19
SLC3A2-201ENST00000338663 DMRT2Q9Y5R5 561 aa22.51■■□□□ 1.19
SLC3A2-201ENST00000338663 TCERG1O14776 1098 aaKnown RBP22.51■■□□□ 1.19
SLC3A2-201ENST00000338663 FCHSD2O94868 740 aa22.51■■□□□ 1.19
SLC3A2-201ENST00000338663 RTL5Q5HYW3 569 aaPredicted RBP22.51■■□□□ 1.19
SLC3A2-201ENST00000338663 RGPD1P0DJD0 1748 aa22.5■■□□□ 1.19
SLC3A2-201ENST00000338663 NCOA3Q9Y6Q9 1424 aa22.5■■□□□ 1.19
SLC3A2-201ENST00000338663 RSPH6AQ9H0K4 717 aa22.49■■□□□ 1.19
SLC3A2-201ENST00000338663 DCCP43146 1447 aa22.49■■□□□ 1.19
SLC3A2-201ENST00000338663 WDR63Q8IWG1 891 aa22.49■■□□□ 1.19
SLC3A2-201ENST00000338663 ESCO1Q5FWF5 840 aa22.48■■□□□ 1.19
SLC3A2-201ENST00000338663 MS4A1P11836 297 aa22.47■■□□□ 1.19
SLC3A2-201ENST00000338663 TMPOP42166 694 aaKnown RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms