RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 IRX3P78415 501 aaPredicted RBP19.35■□□□□ 0.69
NPHP3-201ENST00000337331 TERF1P54274 439 aa19.34■□□□□ 0.69
NPHP3-201ENST00000337331 DMTNQ08495 405 aa19.34■□□□□ 0.69
NPHP3-201ENST00000337331 CDC45O75419 566 aa19.34■□□□□ 0.69
NPHP3-201ENST00000337331 MCM5P33992 734 aa19.34■□□□□ 0.69
NPHP3-201ENST00000337331 EHBP1L1Q8N3D4 1523 aa19.33■□□□□ 0.69
NPHP3-201ENST00000337331 GOLGA6L19H0YKK7 550 aa19.33■□□□□ 0.69
NPHP3-201ENST00000337331 TROQ12816 1431 aaPredicted RBP19.33■□□□□ 0.69
NPHP3-201ENST00000337331 KLHL40Q2TBA0 621 aa19.32■□□□□ 0.68
NPHP3-201ENST00000337331 CREBRFQ8IUR6 639 aa19.32■□□□□ 0.68
NPHP3-201ENST00000337331 RBM27Q9P2N5 1060 aaKnown RBP19.32■□□□□ 0.68
NPHP3-201ENST00000337331 GOLGA6L1Q8N7Z2 621 aa19.32■□□□□ 0.68
NPHP3-201ENST00000337331 VPS37CA5D8V6 355 aaPredicted RBP19.32■□□□□ 0.68
NPHP3-201ENST00000337331 MBD3O95983 291 aa19.32■□□□□ 0.68
NPHP3-201ENST00000337331 TIGD1Q96MW7 591 aa19.32■□□□□ 0.68
NPHP3-201ENST00000337331 ARHGAP5Q13017 1502 aa19.31■□□□□ 0.68
NPHP3-201ENST00000337331 DUSP27Q5VZP5 1158 aa19.31■□□□□ 0.68
NPHP3-201ENST00000337331 NOL7Q9UMY1 257 aaKnown RBP19.31■□□□□ 0.68
NPHP3-201ENST00000337331 KDM2BQ8NHM5 1336 aa19.31■□□□□ 0.68
NPHP3-201ENST00000337331 RASSF8Q8NHQ8 419 aa19.31■□□□□ 0.68
NPHP3-201ENST00000337331 C1orf115Q9H7X2 142 aa19.31■□□□□ 0.68
NPHP3-201ENST00000337331 BAG4O95429 457 aaKnown RBP19.3■□□□□ 0.68
NPHP3-201ENST00000337331 PRIMPOLQ96LW4 560 aa19.3■□□□□ 0.68
NPHP3-201ENST00000337331 DAPK1P53355 1430 aa19.3■□□□□ 0.68
NPHP3-201ENST00000337331 ZSCAN23Q3MJ62 389 aa19.29■□□□□ 0.68
NPHP3-201ENST00000337331 CALCOCO1Q9P1Z2 691 aa19.29■□□□□ 0.68
NPHP3-201ENST00000337331 SYNJ2O15056 1496 aa19.29■□□□□ 0.68
NPHP3-201ENST00000337331 PRIM1P49642 420 aaKnown RBP19.29■□□□□ 0.68
NPHP3-201ENST00000337331 SLFN5Q08AF3 891 aa19.29■□□□□ 0.68
NPHP3-201ENST00000337331 DNAJC2Q99543 621 aaKnown RBP19.29■□□□□ 0.68
NPHP3-201ENST00000337331 SMC3Q9UQE7 1217 aa19.29■□□□□ 0.68
NPHP3-201ENST00000337331 G3BP1Q13283 466 aaKnown RBP eCLIP19.28■□□□□ 0.68
NPHP3-201ENST00000337331 KIF21AQ7Z4S6 1674 aa19.28■□□□□ 0.68
NPHP3-201ENST00000337331 IPO4Q8TEX9 1081 aaKnown RBP19.28■□□□□ 0.68
NPHP3-201ENST00000337331 GPS2Q13227 327 aa19.28■□□□□ 0.68
NPHP3-201ENST00000337331 NOB1Q9ULX3 412 aaKnown RBP19.28■□□□□ 0.68
NPHP3-201ENST00000337331 TPD52L1Q16890 204 aaPredicted RBP19.28■□□□□ 0.68
NPHP3-201ENST00000337331 TTC5Q8N0Z6 440 aa19.28■□□□□ 0.68
NPHP3-201ENST00000337331 CCDC112Q8NEF3 446 aa19.28■□□□□ 0.68
NPHP3-201ENST00000337331 TWISTNBQ3B726 338 aaPredicted RBP19.27■□□□□ 0.68
NPHP3-201ENST00000337331 GTF2E1P29083 439 aaPredicted RBP19.27■□□□□ 0.68
NPHP3-201ENST00000337331 PRAM1Q96QH2 718 aa19.27■□□□□ 0.68
NPHP3-201ENST00000337331 USP25Q9UHP3 1055 aa19.27■□□□□ 0.67
NPHP3-201ENST00000337331 HS1BP3Q53T59 392 aa19.26■□□□□ 0.67
NPHP3-201ENST00000337331 NUTM2GQ5VZR2 741 aa19.26■□□□□ 0.67
NPHP3-201ENST00000337331 BICD2Q8TD16 824 aa19.26■□□□□ 0.67
NPHP3-201ENST00000337331 NOLC1Q14978 699 aaKnown RBP eCLIP19.26■□□□□ 0.67
NPHP3-201ENST00000337331 DDX58O95786 925 aaKnown RBP19.26■□□□□ 0.67
NPHP3-201ENST00000337331 ERBINQ96RT1 1412 aa19.26■□□□□ 0.67
NPHP3-201ENST00000337331 PSME1Q06323 249 aa19.25■□□□□ 0.67
NPHP3-201ENST00000337331 PRDM4Q9UKN5 801 aa19.25■□□□□ 0.67
NPHP3-201ENST00000337331 UBTFL1P0CB47 393 aaPredicted RBP19.25■□□□□ 0.67
NPHP3-201ENST00000337331 NLRP6P59044 892 aa19.25■□□□□ 0.67
NPHP3-201ENST00000337331 RNF20Q5VTR2 975 aa19.25■□□□□ 0.67
NPHP3-201ENST00000337331 U2AF2P26368 475 aaKnown RBP eCLIP19.25■□□□□ 0.674e-6■■□□□ 13.2
NPHP3-201ENST00000337331 UTP14CQ5TAP6 766 aaKnown RBP19.25■□□□□ 0.67
NPHP3-201ENST00000337331 TRIM34Q9BYJ4 488 aa19.25■□□□□ 0.67
NPHP3-201ENST00000337331 CLSTN1O94985 981 aa19.25■□□□□ 0.67
NPHP3-201ENST00000337331 NEK4P51957 841 aa19.25■□□□□ 0.67
NPHP3-201ENST00000337331 ANKRD30BQ9BXX2 1392 aa19.24■□□□□ 0.67
NPHP3-201ENST00000337331 HSP90AB4PQ58FF6 505 aa19.24■□□□□ 0.67
NPHP3-201ENST00000337331 ATF7IPQ6VMQ6 1270 aa19.24■□□□□ 0.67
NPHP3-201ENST00000337331 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.24■□□□□ 0.67
NPHP3-201ENST00000337331 TTC12Q9H892 705 aaPredicted RBP19.24■□□□□ 0.67
NPHP3-201ENST00000337331 FAM69CQ0P6D2 419 aa19.24■□□□□ 0.67
NPHP3-201ENST00000337331 CPLX2Q6PUV4 134 aaKnown RBP19.24■□□□□ 0.67
NPHP3-201ENST00000337331 CHMP4CQ96CF2 233 aa19.24■□□□□ 0.67
NPHP3-201ENST00000337331 WDR63Q8IWG1 891 aa19.23■□□□□ 0.67
NPHP3-201ENST00000337331 CERS3Q8IU89 383 aa19.23■□□□□ 0.67
NPHP3-201ENST00000337331 RBSNQ9H1K0 784 aa19.23■□□□□ 0.67
NPHP3-201ENST00000337331 SURF6O75683 361 aaKnown RBP19.22■□□□□ 0.67
NPHP3-201ENST00000337331 ANTXR1Q9H6X2 564 aa19.22■□□□□ 0.67
NPHP3-201ENST00000337331 ERC2O15083 957 aa19.22■□□□□ 0.67
NPHP3-201ENST00000337331 MVPQ14764 893 aaKnown RBP19.22■□□□□ 0.67
NPHP3-201ENST00000337331 CABP1Q9NZU7 370 aa19.22■□□□□ 0.67
NPHP3-201ENST00000337331 CPLX1O14810 134 aa19.21■□□□□ 0.67
NPHP3-201ENST00000337331 GCC1Q96CN9 775 aa19.21■□□□□ 0.67
NPHP3-201ENST00000337331 AIMP1Q12904 312 aaKnown RBP19.21■□□□□ 0.67
NPHP3-201ENST00000337331 SCAPERQ9BY12 1400 aa19.21■□□□□ 0.67
NPHP3-201ENST00000337331 GNAI3P08754 354 aa19.21■□□□□ 0.67
NPHP3-201ENST00000337331 CCAR2Q8N163 923 aaKnown RBP19.21■□□□□ 0.66
NPHP3-201ENST00000337331 CDK13Q14004 1512 aaKnown RBP19.2■□□□□ 0.66
NPHP3-201ENST00000337331 WWC1Q8IX03 1113 aa19.2■□□□□ 0.66
NPHP3-201ENST00000337331 GTF2F1P35269 517 aaKnown RBP eCLIP19.2■□□□□ 0.66
NPHP3-201ENST00000337331 LRRFIP1Q32MZ4 808 aaKnown RBP19.2■□□□□ 0.66
NPHP3-201ENST00000337331 RABEP1Q15276 862 aa19.2■□□□□ 0.66
NPHP3-201ENST00000337331 MYRIPQ8NFW9 859 aa19.2■□□□□ 0.66
NPHP3-201ENST00000337331 PPP1R9BQ96SB3 815 aa19.2■□□□□ 0.66
NPHP3-201ENST00000337331 PES1O00541 588 aaKnown RBP19.19■□□□□ 0.66
NPHP3-201ENST00000337331 EPRSP07814 1512 aaKnown RBP19.19■□□□□ 0.66
NPHP3-201ENST00000337331 RAB3GAP1Q15042 981 aa19.19■□□□□ 0.66
NPHP3-201ENST00000337331 TPM3P06753 285 aa19.18■□□□□ 0.66
NPHP3-201ENST00000337331 CLASRPQ8N2M8 674 aaKnown RBP19.18■□□□□ 0.66
NPHP3-201ENST00000337331 PCDHB15Q9Y5E8 787 aa19.18■□□□□ 0.66
NPHP3-201ENST00000337331 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.18■□□□□ 0.66
NPHP3-201ENST00000337331 NOM1Q5C9Z4 860 aaKnown RBP19.18■□□□□ 0.66
NPHP3-201ENST00000337331 SULT6B1Q6IMI4 303 aa19.18■□□□□ 0.66
NPHP3-201ENST00000337331 TSPYL1Q9H0U9 437 aa19.18■□□□□ 0.66
NPHP3-201ENST00000337331 TRIM5Q9C035 493 aa19.18■□□□□ 0.66
NPHP3-201ENST00000337331 C17orf53Q8N3J3 647 aaPredicted RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms