RNA–Protein interactions for RNA: ENST00000337304.2

ATF4-201, Transcript of activating transcription factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF4, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4-201ENST00000337304 TTC21BQ7Z4L5 1316 aa34.63■■■■□ 3.13
ATF4-201ENST00000337304 ZRANB1Q9UGI0 708 aa34.62■■■■□ 3.13
ATF4-201ENST00000337304 SALL2Q9Y467 1007 aaPredicted RBP34.62■■■■□ 3.13
ATF4-201ENST00000337304 SSH2Q76I76 1423 aa34.61■■■■□ 3.13
ATF4-201ENST00000337304 MAP2P11137 1827 aaKnown RBP34.61■■■■□ 3.13
ATF4-201ENST00000337304 SMG6Q86US8 1419 aaKnown RBP34.6■■■■□ 3.13
ATF4-201ENST00000337304 COL3A1P02461 1466 aaPredicted RBP34.59■■■■□ 3.13
ATF4-201ENST00000337304 COG3Q96JB2 828 aa34.58■■■■□ 3.13
ATF4-201ENST00000337304 NGDNQ8NEJ9 315 aaKnown RBP34.57■■■■□ 3.13
ATF4-201ENST00000337304 STRCP1A6NGW2 1772 aa34.57■■■■□ 3.12
ATF4-201ENST00000337304 CCDC146Q8IYE0 955 aa34.56■■■■□ 3.12
ATF4-201ENST00000337304 STRCQ7RTU9 1775 aa34.55■■■■□ 3.12
ATF4-201ENST00000337304 PROSER2Q86WR7 435 aaPredicted RBP34.55■■■■□ 3.12
ATF4-201ENST00000337304 NUDCQ9Y266 331 aa34.54■■■■□ 3.12
ATF4-201ENST00000337304 PNPLA6Q8IY17 1366 aa34.54■■■■□ 3.12
ATF4-201ENST00000337304 FBLN1P23142 703 aa34.54■■■■□ 3.12
ATF4-201ENST00000337304 C14orf37Q86TY3 774 aa34.53■■■■□ 3.12
ATF4-201ENST00000337304 POLKQ9UBT6 870 aa34.53■■■■□ 3.12
ATF4-201ENST00000337304 AATKQ6ZMQ8 1374 aa34.53■■■■□ 3.12
ATF4-201ENST00000337304 OVOS2A0A0J9YW53 1432 aa34.52■■■■□ 3.12
ATF4-201ENST00000337304 OVOS2Q6IE36 1432 aa34.52■■■■□ 3.12
ATF4-201ENST00000337304 TTC21AQ8NDW8 1320 aa34.51■■■■□ 3.12
ATF4-201ENST00000337304 PDE3BQ13370 1112 aa34.51■■■■□ 3.12
ATF4-201ENST00000337304 SUPT16HQ9Y5B9 1047 aaKnown RBP34.49■■■■□ 3.11
ATF4-201ENST00000337304 PHF8Q9UPP1 1060 aa34.47■■■■□ 3.11
ATF4-201ENST00000337304 APAF1O14727 1248 aa34.46■■■■□ 3.11
ATF4-201ENST00000337304 PIK3C2AO00443 1686 aa34.45■■■■□ 3.1
ATF4-201ENST00000337304 EMILIN1Q9Y6C2 1016 aa34.44■■■■□ 3.1
ATF4-201ENST00000337304 DIAPH1O60610 1272 aaKnown RBP34.43■■■■□ 3.1
ATF4-201ENST00000337304 U2AF1L5P0DN76 240 aaPredicted RBP34.43■■■■□ 3.1
ATF4-201ENST00000337304 U2AF1Q01081 240 aaKnown RBP eCLIP34.43■■■■□ 3.1
ATF4-201ENST00000337304 PPM1GO15355 546 aaPredicted RBP34.42■■■■□ 3.1
ATF4-201ENST00000337304 RUNDC1Q96C34 613 aa34.42■■■■□ 3.1
ATF4-201ENST00000337304 ZNF521Q96K83 1311 aa34.42■■■■□ 3.1
ATF4-201ENST00000337304 CDK12Q9NYV4 1490 aaPredicted RBP34.42■■■■□ 3.1
ATF4-201ENST00000337304 CDCA7LQ96GN5 454 aa34.41■■■■□ 3.1
ATF4-201ENST00000337304 USP31Q70CQ4 1352 aa34.41■■■■□ 3.1
ATF4-201ENST00000337304 C19orf44Q9H6X5 657 aa34.4■■■■□ 3.1
ATF4-201ENST00000337304 TMEM94Q12767 1356 aa34.4■■■■□ 3.1
ATF4-201ENST00000337304 ESCO1Q5FWF5 840 aa34.4■■■■□ 3.1
ATF4-201ENST00000337304 RRS1Q15050 365 aaKnown RBP34.39■■■■□ 3.1
ATF4-201ENST00000337304 IQSEC2Q5JU85 1478 aa34.39■■■■□ 3.1
ATF4-201ENST00000337304 U2SURPO15042 1029 aaKnown RBP34.38■■■■□ 3.09
ATF4-201ENST00000337304 NCOA3Q9Y6Q9 1424 aa34.38■■■■□ 3.09
ATF4-201ENST00000337304 NEFLP07196 543 aa34.38■■■■□ 3.09
ATF4-201ENST00000337304 NGEFQ8N5V2 710 aa34.37■■■■□ 3.09
ATF4-201ENST00000337304 FKBP8Q14318 412 aa34.37■■■■□ 3.09
ATF4-201ENST00000337304 USP54Q70EL1 1684 aa34.36■■■■□ 3.09
ATF4-201ENST00000337304 MARF1Q9Y4F3 1742 aaKnown RBP34.35■■■■□ 3.09
ATF4-201ENST00000337304 ORAI2Q96SN7 254 aa34.33■■■■□ 3.09
ATF4-201ENST00000337304 TCP11L2Q8N4U5 519 aa34.32■■■■□ 3.08
ATF4-201ENST00000337304 C1orf167Q5SNV9 1468 aa34.32■■■■□ 3.08
ATF4-201ENST00000337304 DCCP43146 1447 aa34.31■■■■□ 3.08
ATF4-201ENST00000337304 XIRP1Q702N8 1843 aaKnown RBP34.3■■■■□ 3.08
ATF4-201ENST00000337304 PLEKHF1Q96S99 279 aa34.3■■■■□ 3.08
ATF4-201ENST00000337304 PEAK1Q9H792 1746 aa34.29■■■■□ 3.08
ATF4-201ENST00000337304 GOLGA2Q08379 1002 aa34.29■■■■□ 3.08
ATF4-201ENST00000337304 IL13P35225 146 aa34.28■■■■□ 3.08
ATF4-201ENST00000337304 NLRP6P59044 892 aa34.28■■■■□ 3.08
ATF4-201ENST00000337304 KIF1AQ12756 1690 aa34.28■■■■□ 3.08
ATF4-201ENST00000337304 PAK3O75914 559 aaPredicted RBP34.28■■■■□ 3.08
ATF4-201ENST00000337304 PSME1Q06323 249 aa34.27■■■■□ 3.08
ATF4-201ENST00000337304 ABTB2Q8N961 1025 aa34.27■■■■□ 3.08
ATF4-201ENST00000337304 LRRC7Q96NW7 1537 aa34.27■■■■□ 3.08
ATF4-201ENST00000337304 ATF3P18847 181 aa34.26■■■■□ 3.07
ATF4-201ENST00000337304 MST1RQ04912 1400 aa34.26■■■■□ 3.07
ATF4-201ENST00000337304 RRP7AQ9Y3A4 280 aaKnown RBP34.25■■■■□ 3.07
ATF4-201ENST00000337304 SOX12O15370 315 aa34.24■■■■□ 3.07
ATF4-201ENST00000337304 NUTM2GQ5VZR2 741 aa34.23■■■■□ 3.07
ATF4-201ENST00000337304 WWC1Q8IX03 1113 aa34.23■■■■□ 3.07
ATF4-201ENST00000337304 FCHSD2O94868 740 aa34.22■■■■□ 3.07
ATF4-201ENST00000337304 NEUROD2Q15784 382 aa34.22■■■■□ 3.07
ATF4-201ENST00000337304 NCBP3Q53F19 620 aaKnown RBP34.22■■■■□ 3.07
ATF4-201ENST00000337304 PHF23Q9BUL5 403 aaPredicted RBP34.22■■■■□ 3.07
ATF4-201ENST00000337304 FOXO3O43524 673 aa34.21■■■■□ 3.07
ATF4-201ENST00000337304 SLFN5Q08AF3 891 aa34.21■■■■□ 3.07
ATF4-201ENST00000337304 PNNQ9H307 717 aaKnown RBP34.21■■■■□ 3.07
ATF4-201ENST00000337304 RNF123Q5XPI4 1314 aa34.21■■■■□ 3.07
ATF4-201ENST00000337304 DUSP27Q5VZP5 1158 aa34.21■■■■□ 3.07
ATF4-201ENST00000337304 MAP3K19Q56UN5 1328 aa34.21■■■■□ 3.07
ATF4-201ENST00000337304 ZNF335Q9H4Z2 1342 aaPredicted RBP34.2■■■■□ 3.07
ATF4-201ENST00000337304 RSPH6AQ9H0K4 717 aa34.2■■■■□ 3.06
ATF4-201ENST00000337304 MSH6P52701 1360 aa34.19■■■■□ 3.06
ATF4-201ENST00000337304 CCDC27Q2M243 656 aa34.19■■■■□ 3.06
ATF4-201ENST00000337304 TRMT2AQ8IZ69 625 aaKnown RBP34.18■■■■□ 3.06
ATF4-201ENST00000337304 DMRT2Q9Y5R5 561 aa34.18■■■■□ 3.06
ATF4-201ENST00000337304 TRPM3Q9HCF6 1732 aaPredicted RBP34.18■■■■□ 3.06
ATF4-201ENST00000337304 MAPK8IP3Q9UPT6 1336 aa34.18■■■■□ 3.06
ATF4-201ENST00000337304 IRX6P78412 446 aaPredicted RBP34.18■■■■□ 3.06
ATF4-201ENST00000337304 CADPS2Q86UW7 1296 aa34.18■■■■□ 3.06
ATF4-201ENST00000337304 SPINK5Q9NQ38 1064 aaPredicted RBP34.18■■■■□ 3.06
ATF4-201ENST00000337304 RCAN3Q9UKA8 241 aa34.17■■■■□ 3.06
ATF4-201ENST00000337304 SBNO1A3KN83 1393 aa34.16■■■■□ 3.06
ATF4-201ENST00000337304 EIF4A2Q14240 407 aaKnown RBP34.16■■■■□ 3.06
ATF4-201ENST00000337304 HSP90AB2PQ58FF8 381 aa34.15■■■■□ 3.06
ATF4-201ENST00000337304 HMOX1P09601 288 aa34.14■■■■□ 3.06
ATF4-201ENST00000337304 E9PSI1 815 aa34.14■■■■□ 3.06
ATF4-201ENST00000337304 PRKAR2BP31323 418 aa34.14■■■■□ 3.06
ATF4-201ENST00000337304 TMPOP42166 694 aaKnown RBP34.14■■■■□ 3.06
ATF4-201ENST00000337304 XPCQ01831 940 aaPredicted RBP34.14■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms