RNA–Protein interactions for RNA: ENST00000336937.8

ATF3-201, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best) BASIC

Gene ATF3, Length 482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-201ENST00000336937 TTC21AQ8NDW8 1320 aa9.75□□□□□ -0.85
ATF3-201ENST00000336937 TMF1P82094 1093 aa9.74□□□□□ -0.85
ATF3-201ENST00000336937 ACEP12821 1306 aa9.74□□□□□ -0.85
ATF3-201ENST00000336937 CPSF1Q10570 1443 aaKnown RBP9.73□□□□□ -0.85
ATF3-201ENST00000336937 EDC4Q6P2E9 1401 aaKnown RBP9.73□□□□□ -0.85
ATF3-201ENST00000336937 SLIT3O75094 1523 aa9.73□□□□□ -0.85
ATF3-201ENST00000336937 SLIT2O94813 1529 aa9.73□□□□□ -0.85
ATF3-201ENST00000336937 FNBP4Q8N3X1 1017 aaPredicted RBP9.73□□□□□ -0.85
ATF3-201ENST00000336937 PMFBP1Q8TBY8 1022 aa9.73□□□□□ -0.85
ATF3-201ENST00000336937 DDX17Q92841 729 aaKnown RBP9.73□□□□□ -0.85
ATF3-201ENST00000336937 PIK3C2AO00443 1686 aa9.73□□□□□ -0.85
ATF3-201ENST00000336937 NGLY1Q96IV0 654 aa9.72□□□□□ -0.85
ATF3-201ENST00000336937 C8orf37Q96NL8 207 aa9.72□□□□□ -0.85
ATF3-201ENST00000336937 TERF2IPQ9NYB0 399 aa9.72□□□□□ -0.85
ATF3-201ENST00000336937 TRPC5Q9UL62 973 aaPredicted RBP9.72□□□□□ -0.85
ATF3-201ENST00000336937 NRAPQ86VF7 1730 aa9.72□□□□□ -0.85
ATF3-201ENST00000336937 AFF2P51816 1311 aa9.72□□□□□ -0.85
ATF3-201ENST00000336937 CPDO75976 1380 aa9.72□□□□□ -0.85
ATF3-201ENST00000336937 SSH2Q76I76 1423 aa9.72□□□□□ -0.85
ATF3-201ENST00000336937 NUTM2BA6NNL0 878 aaPredicted RBP9.71□□□□□ -0.86
ATF3-201ENST00000336937 NUTM2EB1AL46 878 aaPredicted RBP9.71□□□□□ -0.86
ATF3-201ENST00000336937 HDGFL2Q7Z4V5 671 aaPredicted RBP9.71□□□□□ -0.86
ATF3-201ENST00000336937 NLRP13Q86W25 1043 aa9.71□□□□□ -0.86
ATF3-201ENST00000336937 NUTM2AQ8IVF1 878 aaPredicted RBP9.71□□□□□ -0.86
ATF3-201ENST00000336937 CABP2Q9NPB3 220 aa9.71□□□□□ -0.86
ATF3-201ENST00000336937 USP19O94966 1318 aa9.71□□□□□ -0.86
ATF3-201ENST00000336937 ANKRD36BQ8N2N9 1353 aa9.71□□□□□ -0.86
ATF3-201ENST00000336937 ATRNO75882 1429 aa9.71□□□□□ -0.86
ATF3-201ENST00000336937 ST20-MTHFSA0A0A6YYL1 179 aa9.7□□□□□ -0.86
ATF3-201ENST00000336937 PAK3O75914 559 aaPredicted RBP9.7□□□□□ -0.86
ATF3-201ENST00000336937 XPCQ01831 940 aaPredicted RBP9.7□□□□□ -0.86
ATF3-201ENST00000336937 KCNH5Q8NCM2 988 aa9.7□□□□□ -0.86
ATF3-201ENST00000336937 TESK2Q96S53 571 aa9.7□□□□□ -0.86
ATF3-201ENST00000336937 KTN1Q86UP2 1357 aaKnown RBP9.7□□□□□ -0.86
ATF3-201ENST00000336937 MYOM1P52179 1685 aa9.7□□□□□ -0.86
ATF3-201ENST00000336937 RBM6P78332 1123 aaKnown RBP9.69□□□□□ -0.86
ATF3-201ENST00000336937 EIF4G2P78344 907 aaKnown RBP eCLIP9.69□□□□□ -0.86
ATF3-201ENST00000336937 LMOD2Q6P5Q4 547 aa9.69□□□□□ -0.86
ATF3-201ENST00000336937 ABTB2Q8N961 1025 aa9.69□□□□□ -0.86
ATF3-201ENST00000336937 LMO7Q8WWI1 1683 aa9.69□□□□□ -0.86
ATF3-201ENST00000336937 CABP1Q9NZU7 370 aa9.69□□□□□ -0.86
ATF3-201ENST00000336937 USP21Q9UK80 565 aa9.69□□□□□ -0.86
ATF3-201ENST00000336937 FAM208AQ9UK61 1670 aaKnown RBP9.68□□□□□ -0.86
ATF3-201ENST00000336937 BCL9LQ86UU0 1499 aa9.68□□□□□ -0.86
ATF3-201ENST00000336937 CD163L1Q9NR16 1453 aa9.68□□□□□ -0.86
ATF3-201ENST00000336937 USP31Q70CQ4 1352 aa9.68□□□□□ -0.86
ATF3-201ENST00000336937 SOCS7O14512 581 aa9.68□□□□□ -0.86
ATF3-201ENST00000336937 ADAMTS2O95450 1211 aa9.68□□□□□ -0.86
ATF3-201ENST00000336937 RXRBP28702 533 aa9.68□□□□□ -0.86
ATF3-201ENST00000336937 RGS17Q9UGC6 210 aaPredicted RBP9.68□□□□□ -0.86
ATF3-201ENST00000336937 KIF20BQ96Q89 1820 aa9.68□□□□□ -0.86
ATF3-201ENST00000336937 A0A1W2PP64 1363 aa9.67□□□□□ -0.86
ATF3-201ENST00000336937 UNC5CLQ8IV45 518 aa9.67□□□□□ -0.86
ATF3-201ENST00000336937 OVOS2A0A0J9YW53 1432 aa9.65□□□□□ -0.86
ATF3-201ENST00000336937 OVOS2Q6IE36 1432 aa9.65□□□□□ -0.86
ATF3-201ENST00000336937 TTC21BQ7Z4L5 1316 aa9.65□□□□□ -0.86
ATF3-201ENST00000336937 VPS72Q15906 364 aa9.65□□□□□ -0.86
ATF3-201ENST00000336937 PRDM11Q9NQV5 511 aa9.65□□□□□ -0.86
ATF3-201ENST00000336937 NFAT5O94916 1531 aa9.65□□□□□ -0.86
ATF3-201ENST00000336937 ANKRD26Q9UPS8 1709 aa9.65□□□□□ -0.87
ATF3-201ENST00000336937 RGS12O14924 1447 aa9.65□□□□□ -0.87
ATF3-201ENST00000336937 AATKQ6ZMQ8 1374 aa9.64□□□□□ -0.87
ATF3-201ENST00000336937 KIAA0232Q92628 1395 aa9.64□□□□□ -0.87
ATF3-201ENST00000336937 GLI3P10071 1580 aa9.64□□□□□ -0.87
ATF3-201ENST00000336937 POTEAQ6S8J7 498 aa9.64□□□□□ -0.87
ATF3-201ENST00000336937 TMC1Q8TDI8 760 aa9.64□□□□□ -0.87
ATF3-201ENST00000336937 QTRT2Q9H974 415 aaKnown RBP9.64□□□□□ -0.87
ATF3-201ENST00000336937 LTN1O94822 1766 aa9.64□□□□□ -0.87
ATF3-201ENST00000336937 BLMP54132 1417 aaPredicted RBP9.64□□□□□ -0.87
ATF3-201ENST00000336937 KIF24Q5T7B8 1368 aa9.63□□□□□ -0.87
ATF3-201ENST00000336937 GCP02774 474 aa9.63□□□□□ -0.87
ATF3-201ENST00000336937 NLRP6P59044 892 aa9.63□□□□□ -0.87
ATF3-201ENST00000336937 GJD4Q96KN9 370 aaPredicted RBP9.63□□□□□ -0.87
ATF3-201ENST00000336937 COL5A2P05997 1499 aaPredicted RBP9.63□□□□□ -0.87
ATF3-201ENST00000336937 THSD7AQ9UPZ6 1657 aa9.63□□□□□ -0.87
ATF3-201ENST00000336937 WNK3Q9BYP7 1800 aa9.63□□□□□ -0.87
ATF3-201ENST00000336937 RTL1A6NKG5 1358 aa9.63□□□□□ -0.87
ATF3-201ENST00000336937 NSD2O96028 1365 aa9.63□□□□□ -0.87
ATF3-201ENST00000336937 C11orf95C9JLR9 678 aaPredicted RBP9.62□□□□□ -0.87
ATF3-201ENST00000336937 ILDR2Q71H61 639 aa9.62□□□□□ -0.87
ATF3-201ENST00000336937 THRAP3Q9Y2W1 955 aaKnown RBP9.62□□□□□ -0.87
ATF3-201ENST00000336937 PARP4Q9UKK3 1724 aaKnown RBP9.62□□□□□ -0.87
ATF3-201ENST00000336937 COL18A1P39060 1754 aa9.61□□□□□ -0.87
ATF3-201ENST00000336937 BTG4Q9NY30 223 aa9.61□□□□□ -0.87
ATF3-201ENST00000336937 CRB1P82279 1406 aa9.61□□□□□ -0.87
ATF3-201ENST00000336937 FAM83GA6ND36 823 aa9.6□□□□□ -0.87
ATF3-201ENST00000336937 CABLES1Q8TDN4 633 aa9.6□□□□□ -0.87
ATF3-201ENST00000336937 SLC12A5Q9H2X9 1139 aa9.6□□□□□ -0.87
ATF3-201ENST00000336937 CGNL1Q0VF96 1302 aa9.59□□□□□ -0.87
ATF3-201ENST00000336937 SMG6Q86US8 1419 aaKnown RBP9.59□□□□□ -0.87
ATF3-201ENST00000336937 CAMTA1Q9Y6Y1 1673 aa9.59□□□□□ -0.87
ATF3-201ENST00000336937 ONECUT3O60422 494 aaPredicted RBP9.59□□□□□ -0.87
ATF3-201ENST00000336937 COG3Q96JB2 828 aa9.59□□□□□ -0.87
ATF3-201ENST00000336937 CDCA7Q9BWT1 371 aaPredicted RBP9.59□□□□□ -0.87
ATF3-201ENST00000336937 SPATA31A5Q5VU36 1347 aa9.58□□□□□ -0.88
ATF3-201ENST00000336937 SPATA31A7Q8IWB4 1347 aa9.58□□□□□ -0.88
ATF3-201ENST00000336937 NSD3Q9BZ95 1437 aa9.58□□□□□ -0.88
ATF3-201ENST00000336937 HSPA5P11021 654 aaKnown RBP9.58□□□□□ -0.88
ATF3-201ENST00000336937 BARGINQ6ZT62 677 aa9.58□□□□□ -0.88
ATF3-201ENST00000336937 ARHGEF25Q86VW2 580 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms