RNA–Protein interactions for RNA: ENST00000333479.11

KNTC1-201, Transcript of kinetochore associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KNTC1, Length 6,975 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-201ENST00000333479 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.66□□□□□ -1.666e-7■■■□□ 19.2
KNTC1-201ENST00000333479 TFCP2L1Q9NZI6 479 aa4.66□□□□□ -1.66
KNTC1-201ENST00000333479 EIF4G3O43432 1585 aaKnown RBP4.66□□□□□ -1.66
KNTC1-201ENST00000333479 ZSCAN29Q8IWY8 852 aaPredicted RBP4.66□□□□□ -1.66
KNTC1-201ENST00000333479 LRRC9Q6ZRR7 1453 aa4.65□□□□□ -1.66
KNTC1-201ENST00000333479 HNRNPUQ00839 825 aaKnown RBP eCLIP4.65□□□□□ -1.66
KNTC1-201ENST00000333479 APBB1IPQ7Z5R6 666 aaPredicted RBP4.65□□□□□ -1.66
KNTC1-201ENST00000333479 UTP14AQ9BVJ6 771 aaKnown RBP4.65□□□□□ -1.66
KNTC1-201ENST00000333479 FERMT2Q96AC1 680 aa4.65□□□□□ -1.66
KNTC1-201ENST00000333479 MPHOSPH8Q99549 860 aa4.65□□□□□ -1.66
KNTC1-201ENST00000333479 API5Q9BZZ5 524 aaKnown RBP4.65□□□□□ -1.66
KNTC1-201ENST00000333479 SUPT6HQ7KZ85 1726 aaKnown RBP4.65□□□□□ -1.67
KNTC1-201ENST00000333479 GLRX3O76003 335 aaKnown RBP4.65□□□□□ -1.67
KNTC1-201ENST00000333479 HMGB1P09429 215 aaKnown RBP4.65□□□□□ -1.67
KNTC1-201ENST00000333479 NYXQ9GZU5 481 aa4.65□□□□□ -1.67
KNTC1-201ENST00000333479 C19orf44Q9H6X5 657 aa4.65□□□□□ -1.67
KNTC1-201ENST00000333479 CCDC27Q2M243 656 aa4.65□□□□□ -1.67
KNTC1-201ENST00000333479 ZNF622Q969S3 477 aaKnown RBP eCLIP4.65□□□□□ -1.672e-7■■□□□ 13
KNTC1-201ENST00000333479 CABP5Q9NP86 173 aa4.65□□□□□ -1.67
KNTC1-201ENST00000333479 CCDC7Q96M83 1385 aa4.65□□□□□ -1.67
KNTC1-201ENST00000333479 YEATS2Q9ULM3 1422 aa4.64□□□□□ -1.67
KNTC1-201ENST00000333479 PTMSP20962 102 aa4.64□□□□□ -1.67
KNTC1-201ENST00000333479 GRM1Q13255 1194 aa4.64□□□□□ -1.67
KNTC1-201ENST00000333479 MAP3K1Q13233 1512 aa4.64□□□□□ -1.67
KNTC1-201ENST00000333479 ABCA5Q8WWZ7 1642 aa4.64□□□□□ -1.67
KNTC1-201ENST00000333479 WDR7Q9Y4E6 1490 aa4.64□□□□□ -1.67
KNTC1-201ENST00000333479 DDB1Q16531 1140 aa4.64□□□□□ -1.67
KNTC1-201ENST00000333479 SCLT1Q96NL6 688 aa4.64□□□□□ -1.67
KNTC1-201ENST00000333479 ATAD2Q6PL18 1390 aa4.64□□□□□ -1.67
KNTC1-201ENST00000333479 RTEL1-TNFRSF6BF6WH68 1400 aa4.64□□□□□ -1.67
KNTC1-201ENST00000333479 PTPRKQ15262 1439 aa4.64□□□□□ -1.67
KNTC1-201ENST00000333479 KIF14Q15058 1648 aa4.64□□□□□ -1.67
KNTC1-201ENST00000333479 PPP1R42Q7Z4L9 355 aa4.64□□□□□ -1.67
KNTC1-201ENST00000333479 TIAM1Q13009 1591 aa4.64□□□□□ -1.67
KNTC1-201ENST00000333479 PPM1FP49593 454 aaPredicted RBP4.64□□□□□ -1.67
KNTC1-201ENST00000333479 VTI1AQ96AJ9 217 aa4.64□□□□□ -1.67
KNTC1-201ENST00000333479 CCDC136Q96JN2 1154 aa4.64□□□□□ -1.67
KNTC1-201ENST00000333479 TAOK2Q9UL54 1235 aa4.64□□□□□ -1.67
KNTC1-201ENST00000333479 COG6Q9Y2V7 657 aa4.64□□□□□ -1.67
KNTC1-201ENST00000333479 YY1P25490 414 aa4.64□□□□□ -1.67
KNTC1-201ENST00000333479 CRACR2BQ8N4Y2 399 aaPredicted RBP4.64□□□□□ -1.67
KNTC1-201ENST00000333479 NOC3LQ8WTT2 800 aaKnown RBP4.64□□□□□ -1.67
KNTC1-201ENST00000333479 RWDD1Q9H446 243 aaPredicted RBP4.64□□□□□ -1.67
KNTC1-201ENST00000333479 GNAI1P63096 354 aa4.64□□□□□ -1.67
KNTC1-201ENST00000333479 GSTO1P78417 241 aa4.64□□□□□ -1.67
KNTC1-201ENST00000333479 CC2D1BQ5T0F9 858 aaKnown RBP4.64□□□□□ -1.67
KNTC1-201ENST00000333479 CCDC125Q86Z20 511 aa4.64□□□□□ -1.67
KNTC1-201ENST00000333479 CNNM1Q9NRU3 951 aa4.64□□□□□ -1.67
KNTC1-201ENST00000333479 HOOK1Q9UJC3 728 aaKnown RBP4.64□□□□□ -1.67
KNTC1-201ENST00000333479 SALL2Q9Y467 1007 aaPredicted RBP4.64□□□□□ -1.67
KNTC1-201ENST00000333479 ERC2O15083 957 aa4.63□□□□□ -1.67
KNTC1-201ENST00000333479 IFIT2P09913 472 aaKnown RBP4.63□□□□□ -1.67
KNTC1-201ENST00000333479 SAFBQ15424 915 aaKnown RBP eCLIP4.63□□□□□ -1.67
KNTC1-201ENST00000333479 KANK4Q5T7N3 995 aaPredicted RBP4.63□□□□□ -1.67
KNTC1-201ENST00000333479 SPTY2D1Q68D10 685 aaPredicted RBP4.63□□□□□ -1.67
KNTC1-201ENST00000333479 BICDL1Q6ZP65 573 aa4.63□□□□□ -1.67
KNTC1-201ENST00000333479 ERC1Q8IUD2 1116 aa4.63□□□□□ -1.67
KNTC1-201ENST00000333479 ANKRD20A12PQ8NF67 263 aa4.63□□□□□ -1.67
KNTC1-201ENST00000333479 FRAT1Q92837 279 aaPredicted RBP4.63□□□□□ -1.67
KNTC1-201ENST00000333479 TSPYL2Q9H2G4 693 aaPredicted RBP4.63□□□□□ -1.67
KNTC1-201ENST00000333479 HFM1A2PYH4 1435 aa4.63□□□□□ -1.67
KNTC1-201ENST00000333479 PABPC4Q13310 644 aaKnown RBP eCLIP4.63□□□□□ -1.67
KNTC1-201ENST00000333479 WASHC4Q2M389 1173 aa4.63□□□□□ -1.67
KNTC1-201ENST00000333479 CCDC158Q5M9N0 1113 aa4.63□□□□□ -1.67
KNTC1-201ENST00000333479 RNF20Q5VTR2 975 aa4.63□□□□□ -1.67
KNTC1-201ENST00000333479 DDX46Q7L014 1031 aaKnown RBP4.63□□□□□ -1.67
KNTC1-201ENST00000333479 PTMAP06454 111 aaKnown RBP4.63□□□□□ -1.67
KNTC1-201ENST00000333479 CAVIN4Q5BKX8 364 aa4.63□□□□□ -1.67
KNTC1-201ENST00000333479 RNF216Q9NWF9 866 aaPredicted RBP4.63□□□□□ -1.67
KNTC1-201ENST00000333479 APPP05067 770 aa4.63□□□□□ -1.67
KNTC1-201ENST00000333479 SAMD1Q6SPF0 538 aaPredicted RBP4.63□□□□□ -1.67
KNTC1-201ENST00000333479 MPHOSPH9Q99550 1183 aa4.63□□□□□ -1.67
KNTC1-201ENST00000333479 SUPT16HQ9Y5B9 1047 aaKnown RBP4.63□□□□□ -1.67
KNTC1-201ENST00000333479 KRT28Q7Z3Y7 464 aa4.63□□□□□ -1.67
KNTC1-201ENST00000333479 MTIF3Q9H2K0 278 aaKnown RBP4.63□□□□□ -1.67
KNTC1-201ENST00000333479 NOC2LQ9Y3T9 749 aaKnown RBP4.63□□□□□ -1.67
KNTC1-201ENST00000333479 KIF16BQ96L93 1317 aa4.63□□□□□ -1.67
KNTC1-201ENST00000333479 PCF11O94913 1555 aaKnown RBP4.63□□□□□ -1.67
KNTC1-201ENST00000333479 FGD6Q6ZV73 1430 aa4.63□□□□□ -1.67
KNTC1-201ENST00000333479 HLA-DOAP06340 250 aa4.62□□□□□ -1.67
KNTC1-201ENST00000333479 SPC25Q9HBM1 224 aa4.62□□□□□ -1.67
KNTC1-201ENST00000333479 USP21Q9UK80 565 aa4.62□□□□□ -1.67
KNTC1-201ENST00000333479 ZNF608Q9ULD9 1512 aaPredicted RBP4.62□□□□□ -1.67
KNTC1-201ENST00000333479 ZNF530Q6P9A1 599 aaPredicted RBP4.62□□□□□ -1.67
KNTC1-201ENST00000333479 ADGRL1O94910 1474 aa4.62□□□□□ -1.67
KNTC1-201ENST00000333479 TSR1Q2NL82 804 aaKnown RBP4.62□□□□□ -1.67
KNTC1-201ENST00000333479 ODF2Q5BJF6 829 aa4.62□□□□□ -1.67
KNTC1-201ENST00000333479 SH2D4AQ9H788 454 aa4.62□□□□□ -1.67
KNTC1-201ENST00000333479 TROQ12816 1431 aaPredicted RBP4.62□□□□□ -1.67
KNTC1-201ENST00000333479 WDR78Q5VTH9 848 aa4.62□□□□□ -1.67
KNTC1-201ENST00000333479 NOL8Q76FK4 1167 aaKnown RBP4.62□□□□□ -1.67
KNTC1-201ENST00000333479 TMEM106CQ9BVX2 250 aa4.62□□□□□ -1.67
KNTC1-201ENST00000333479 UGGT2Q9NYU1 1516 aa4.62□□□□□ -1.67
KNTC1-201ENST00000333479 EIF2S2P20042 333 aaKnown RBP4.62□□□□□ -1.67
KNTC1-201ENST00000333479 CDC5LQ99459 802 aaKnown RBP4.62□□□□□ -1.67
KNTC1-201ENST00000333479 RSPH6AQ9H0K4 717 aa4.62□□□□□ -1.67
KNTC1-201ENST00000333479 NSD3Q9BZ95 1437 aa4.62□□□□□ -1.67
KNTC1-201ENST00000333479 CEBPAP49715 358 aaPredicted RBP4.62□□□□□ -1.67
KNTC1-201ENST00000333479 CCDC30Q5VVM6 783 aa4.62□□□□□ -1.67
KNTC1-201ENST00000333479 SLC4A10Q6U841 1118 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms