RNA–Protein interactions for RNA: ENST00000333256.10

TSSC4-201, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,686 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-201ENST00000333256 NHSL1Q5SYE7 1610 aa25.66■■□□□ 1.7
TSSC4-201ENST00000333256 SSH2Q76I76 1423 aa25.66■■□□□ 1.7
TSSC4-201ENST00000333256 SOS2Q07890 1332 aaPredicted RBP25.65■■□□□ 1.7
TSSC4-201ENST00000333256 LMOD2Q6P5Q4 547 aa25.64■■□□□ 1.7
TSSC4-201ENST00000333256 NME9Q86XW9 330 aa25.64■■□□□ 1.69
TSSC4-201ENST00000333256 NRKQ7Z2Y5 1582 aa25.63■■□□□ 1.69
TSSC4-201ENST00000333256 NUTM2GQ5VZR2 741 aa25.63■■□□□ 1.69
TSSC4-201ENST00000333256 AHDC1Q5TGY3 1603 aaPredicted RBP25.63■■□□□ 1.69
TSSC4-201ENST00000333256 ZRANB1Q9UGI0 708 aa25.61■■□□□ 1.69
TSSC4-201ENST00000333256 CGNL1Q0VF96 1302 aa25.61■■□□□ 1.69
TSSC4-201ENST00000333256 PLEKHG5O94827 1062 aa25.61■■□□□ 1.69
TSSC4-201ENST00000333256 TRPM3Q9HCF6 1732 aaPredicted RBP25.6■■□□□ 1.69
TSSC4-201ENST00000333256 ABTB2Q8N961 1025 aa25.6■■□□□ 1.69
TSSC4-201ENST00000333256 GGNBP2Q9H3C7 697 aa25.6■■□□□ 1.69
TSSC4-201ENST00000333256 FYB1O15117 783 aa25.59■■□□□ 1.69
TSSC4-201ENST00000333256 PHLPP1O60346 1717 aa25.59■■□□□ 1.69
TSSC4-201ENST00000333256 SBNO1A3KN83 1393 aa25.59■■□□□ 1.69
TSSC4-201ENST00000333256 SPATA31A3Q5VYP0 1347 aa25.59■■□□□ 1.69
TSSC4-201ENST00000333256 TTC21AQ8NDW8 1320 aa25.59■■□□□ 1.69
TSSC4-201ENST00000333256 AMER1Q5JTC6 1135 aaPredicted RBP25.58■■□□□ 1.69
TSSC4-201ENST00000333256 CC2D1BQ5T0F9 858 aaKnown RBP25.58■■□□□ 1.69
TSSC4-201ENST00000333256 TNS3Q68CZ2 1445 aa25.57■■□□□ 1.68
TSSC4-201ENST00000333256 BRD4O60885 1362 aaPredicted RBP25.57■■□□□ 1.68
TSSC4-201ENST00000333256 HSPA1LP34931 641 aa25.57■■□□□ 1.68
TSSC4-201ENST00000333256 COL16A1Q07092 1604 aaPredicted RBP25.56■■□□□ 1.68
TSSC4-201ENST00000333256 NLRP6P59044 892 aa25.55■■□□□ 1.68
TSSC4-201ENST00000333256 LRRC59Q96AG4 307 aaKnown RBP25.55■■□□□ 1.68
TSSC4-201ENST00000333256 PIK3C2AO00443 1686 aa25.55■■□□□ 1.68
TSSC4-201ENST00000333256 FBXO41Q8TF61 875 aa25.53■■□□□ 1.68
TSSC4-201ENST00000333256 ALS2Q96Q42 1657 aa25.52■■□□□ 1.68
TSSC4-201ENST00000333256 ARHGEF10O15013 1369 aa25.5■■□□□ 1.67
TSSC4-201ENST00000333256 SOX12O15370 315 aa25.5■■□□□ 1.67
TSSC4-201ENST00000333256 DIEXFQ68CQ4 756 aaKnown RBP25.5■■□□□ 1.67
TSSC4-201ENST00000333256 CABLES1Q8TDN4 633 aa25.5■■□□□ 1.67
TSSC4-201ENST00000333256 COG3Q96JB2 828 aa25.5■■□□□ 1.67
TSSC4-201ENST00000333256 KIF20BQ96Q89 1820 aa25.5■■□□□ 1.67
TSSC4-201ENST00000333256 NLRP13Q86W25 1043 aa25.49■■□□□ 1.67
TSSC4-201ENST00000333256 TNNT2P45379 298 aaPredicted RBP25.48■■□□□ 1.67
TSSC4-201ENST00000333256 OVOS2A0A0J9YW53 1432 aa25.48■■□□□ 1.67
TSSC4-201ENST00000333256 OVOS2Q6IE36 1432 aa25.48■■□□□ 1.67
TSSC4-201ENST00000333256 NSD2O96028 1365 aa25.47■■□□□ 1.67
TSSC4-201ENST00000333256 USP31Q70CQ4 1352 aa25.47■■□□□ 1.67
TSSC4-201ENST00000333256 PNPLA6Q8IY17 1366 aa25.47■■□□□ 1.67
TSSC4-201ENST00000333256 MORC1Q86VD1 984 aa25.47■■□□□ 1.67
TSSC4-201ENST00000333256 NPC1L1Q9UHC9 1359 aa25.47■■□□□ 1.67
TSSC4-201ENST00000333256 FBLN1P23142 703 aa25.46■■□□□ 1.67
TSSC4-201ENST00000333256 MED1Q15648 1581 aaPredicted RBP25.44■■□□□ 1.66
TSSC4-201ENST00000333256 USP19O94966 1318 aa25.43■■□□□ 1.66
TSSC4-201ENST00000333256 MARF1Q9Y4F3 1742 aaKnown RBP25.43■■□□□ 1.66
TSSC4-201ENST00000333256 JCADQ9P266 1359 aa25.41■■□□□ 1.66
TSSC4-201ENST00000333256 GCP02774 474 aa25.4■■□□□ 1.66
TSSC4-201ENST00000333256 HAP1P54257 671 aaPredicted RBP25.4■■□□□ 1.66
TSSC4-201ENST00000333256 PRKRIP1Q9H875 184 aaPredicted RBP25.4■■□□□ 1.66
TSSC4-201ENST00000333256 ANKRD26Q9UPS8 1709 aa25.4■■□□□ 1.66
TSSC4-201ENST00000333256 PARD3Q8TEW0 1356 aa25.39■■□□□ 1.65
TSSC4-201ENST00000333256 ANP32CO43423 234 aa25.39■■□□□ 1.65
TSSC4-201ENST00000333256 USP54Q70EL1 1684 aa25.38■■□□□ 1.65
TSSC4-201ENST00000333256 NUTM2BA6NNL0 878 aaPredicted RBP25.38■■□□□ 1.65
TSSC4-201ENST00000333256 NUTM2EB1AL46 878 aaPredicted RBP25.38■■□□□ 1.65
TSSC4-201ENST00000333256 NUTM2AQ8IVF1 878 aaPredicted RBP25.38■■□□□ 1.65
TSSC4-201ENST00000333256 SLIT3O75094 1523 aa25.37■■□□□ 1.65
TSSC4-201ENST00000333256 RRS1Q15050 365 aaKnown RBP25.37■■□□□ 1.65
TSSC4-201ENST00000333256 ZBTB7CA1YPR0 619 aa25.36■■□□□ 1.65
TSSC4-201ENST00000333256 ZC3H6P61129 1189 aaKnown RBP25.36■■□□□ 1.65
TSSC4-201ENST00000333256 COL22A1Q8NFW1 1626 aaPredicted RBP25.36■■□□□ 1.65
TSSC4-201ENST00000333256 CRYBG1Q9Y4K1 1723 aa25.36■■□□□ 1.65
TSSC4-201ENST00000333256 KCNH5Q8NCM2 988 aa25.36■■□□□ 1.65
TSSC4-201ENST00000333256 PHRF1Q9P1Y6 1649 aaKnown RBP25.35■■□□□ 1.65
TSSC4-201ENST00000333256 SHPRHQ149N8 1683 aa25.35■■□□□ 1.65
TSSC4-201ENST00000333256 RALBP1Q15311 655 aa25.35■■□□□ 1.65
TSSC4-201ENST00000333256 NFAT5O94916 1531 aa25.34■■□□□ 1.65
TSSC4-201ENST00000333256 EMILIN1Q9Y6C2 1016 aa25.32■■□□□ 1.64
TSSC4-201ENST00000333256 ABCA3Q99758 1704 aa25.32■■□□□ 1.64
TSSC4-201ENST00000333256 PPM1GO15355 546 aaPredicted RBP25.32■■□□□ 1.64
TSSC4-201ENST00000333256 PPP2R1AP30153 589 aa25.32■■□□□ 1.64
TSSC4-201ENST00000333256 ADAMTS2O95450 1211 aa25.31■■□□□ 1.64
TSSC4-201ENST00000333256 POLKQ9UBT6 870 aa25.31■■□□□ 1.64
TSSC4-201ENST00000333256 MAP3K19Q56UN5 1328 aa25.31■■□□□ 1.64
TSSC4-201ENST00000333256 KIAA0232Q92628 1395 aa25.3■■□□□ 1.64
TSSC4-201ENST00000333256 AATKQ6ZMQ8 1374 aa25.3■■□□□ 1.64
TSSC4-201ENST00000333256 CHRNA2Q15822 529 aa25.29■■□□□ 1.64
TSSC4-201ENST00000333256 ARHGEF25Q86VW2 580 aa25.29■■□□□ 1.64
TSSC4-201ENST00000333256 SPATA31A6Q5VVP1 1343 aa25.28■■□□□ 1.64
TSSC4-201ENST00000333256 MTHFSP49914 203 aa25.28■■□□□ 1.64
TSSC4-201ENST00000333256 MYBBP1AQ9BQG0 1328 aaKnown RBP25.28■■□□□ 1.64
TSSC4-201ENST00000333256 PRDM11Q9NQV5 511 aa25.27■■□□□ 1.64
TSSC4-201ENST00000333256 MIER1Q8N108 512 aa25.26■■□□□ 1.63
TSSC4-201ENST00000333256 LRP6O75581 1613 aa25.26■■□□□ 1.63
TSSC4-201ENST00000333256 AMPHP49418 695 aa25.26■■□□□ 1.63
TSSC4-201ENST00000333256 ILDR1Q86SU0 546 aaPredicted RBP25.26■■□□□ 1.63
TSSC4-201ENST00000333256 CPDO75976 1380 aa25.24■■□□□ 1.63
TSSC4-201ENST00000333256 FAM83GA6ND36 823 aa25.23■■□□□ 1.63
TSSC4-201ENST00000333256 MAP2P11137 1827 aaKnown RBP25.23■■□□□ 1.63
TSSC4-201ENST00000333256 LTN1O94822 1766 aa25.22■■□□□ 1.63
TSSC4-201ENST00000333256 AXIN2Q9Y2T1 843 aa25.22■■□□□ 1.63
TSSC4-201ENST00000333256 PEAK1Q9H792 1746 aa25.22■■□□□ 1.63
TSSC4-201ENST00000333256 HOXC9P31274 260 aa25.21■■□□□ 1.63
TSSC4-201ENST00000333256 HSP90AB2PQ58FF8 381 aa25.21■■□□□ 1.63
TSSC4-201ENST00000333256 SMG6Q86US8 1419 aaKnown RBP25.21■■□□□ 1.63
TSSC4-201ENST00000333256 CCDC184Q52MB2 194 aa25.2■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms