RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 ADGRB2O60241 1585 aa20.85■□□□□ 0.93
PGBD2-201ENST00000329291 ANKLE2Q86XL3 938 aa20.84■□□□□ 0.93
PGBD2-201ENST00000329291 CCDC136Q96JN2 1154 aa20.84■□□□□ 0.93
PGBD2-201ENST00000329291 COL3A1P02461 1466 aaPredicted RBP20.84■□□□□ 0.93
PGBD2-201ENST00000329291 NME9Q86XW9 330 aa20.84■□□□□ 0.93
PGBD2-201ENST00000329291 NGEFQ8N5V2 710 aa20.84■□□□□ 0.93
PGBD2-201ENST00000329291 PTCH1Q13635 1447 aa20.83■□□□□ 0.93
PGBD2-201ENST00000329291 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.83■□□□□ 0.93
PGBD2-201ENST00000329291 ANKRD26Q9UPS8 1709 aa20.83■□□□□ 0.93
PGBD2-201ENST00000329291 IQSEC2Q5JU85 1478 aa20.83■□□□□ 0.92
PGBD2-201ENST00000329291 SETD1BQ9UPS6 1966 aaKnown RBP20.83■□□□□ 0.92
PGBD2-201ENST00000329291 C20orf194Q5TEA3 1177 aa20.83■□□□□ 0.92
PGBD2-201ENST00000329291 PHF23Q9BUL5 403 aaPredicted RBP20.83■□□□□ 0.92
PGBD2-201ENST00000329291 NUTM2FA1L443 756 aa20.82■□□□□ 0.92
PGBD2-201ENST00000329291 E9PSI1 815 aa20.82■□□□□ 0.92
PGBD2-201ENST00000329291 PIK3R4Q99570 1358 aa20.82■□□□□ 0.92
PGBD2-201ENST00000329291 U2SURPO15042 1029 aaKnown RBP20.81■□□□□ 0.92
PGBD2-201ENST00000329291 POLKQ9UBT6 870 aa20.81■□□□□ 0.92
PGBD2-201ENST00000329291 EDC4Q6P2E9 1401 aaKnown RBP20.8■□□□□ 0.92
PGBD2-201ENST00000329291 PNPLA6Q8IY17 1366 aa20.8■□□□□ 0.92
PGBD2-201ENST00000329291 PLEKHF1Q96S99 279 aa20.8■□□□□ 0.92
PGBD2-201ENST00000329291 KIF20BQ96Q89 1820 aa20.8■□□□□ 0.92
PGBD2-201ENST00000329291 CDC42BPGQ6DT37 1551 aa20.79■□□□□ 0.92
PGBD2-201ENST00000329291 CRBNQ96SW2 442 aa20.78■□□□□ 0.92
PGBD2-201ENST00000329291 XRN1Q8IZH2 1706 aaKnown RBP20.78■□□□□ 0.92
PGBD2-201ENST00000329291 PPM1GO15355 546 aaPredicted RBP20.77■□□□□ 0.92
PGBD2-201ENST00000329291 DIAPH1O60610 1272 aaKnown RBP20.77■□□□□ 0.92
PGBD2-201ENST00000329291 RBM19Q9Y4C8 960 aaKnown RBP20.77■□□□□ 0.92
PGBD2-201ENST00000329291 NKTRP30414 1462 aaKnown RBP20.77■□□□□ 0.92
PGBD2-201ENST00000329291 ZNF692Q9BU19 519 aaPredicted RBP20.75■□□□□ 0.91
PGBD2-201ENST00000329291 EMILIN1Q9Y6C2 1016 aa20.75■□□□□ 0.91
PGBD2-201ENST00000329291 BCAR3O75815 825 aa20.75■□□□□ 0.91
PGBD2-201ENST00000329291 CCDC27Q2M243 656 aa20.75■□□□□ 0.91
PGBD2-201ENST00000329291 ACEP12821 1306 aa20.74■□□□□ 0.91
PGBD2-201ENST00000329291 ITSN1Q15811 1721 aa20.74■□□□□ 0.91
PGBD2-201ENST00000329291 WDR63Q8IWG1 891 aa20.74■□□□□ 0.91
PGBD2-201ENST00000329291 PLEKHG3A1L390 1219 aa20.73■□□□□ 0.91
PGBD2-201ENST00000329291 KCNA6P17658 529 aa20.73■□□□□ 0.91
PGBD2-201ENST00000329291 MON2Q7Z3U7 1717 aa20.72■□□□□ 0.91
PGBD2-201ENST00000329291 AKAP12Q02952 1782 aa20.72■□□□□ 0.91
PGBD2-201ENST00000329291 TOPAZ1Q8N9V7 1692 aa20.72■□□□□ 0.91
PGBD2-201ENST00000329291 TMPOP42166 694 aaKnown RBP20.71■□□□□ 0.91
PGBD2-201ENST00000329291 COG3Q96JB2 828 aa20.71■□□□□ 0.91
PGBD2-201ENST00000329291 RRS1Q15050 365 aaKnown RBP20.7■□□□□ 0.9
PGBD2-201ENST00000329291 TRIM35Q9UPQ4 493 aa20.7■□□□□ 0.9
PGBD2-201ENST00000329291 TTC21BQ7Z4L5 1316 aa20.7■□□□□ 0.9
PGBD2-201ENST00000329291 NCBP3Q53F19 620 aaKnown RBP20.69■□□□□ 0.9
PGBD2-201ENST00000329291 NPHP4O75161 1426 aaPredicted RBP20.69■□□□□ 0.9
PGBD2-201ENST00000329291 PMFBP1Q8TBY8 1022 aa20.68■□□□□ 0.9
PGBD2-201ENST00000329291 MAP2P11137 1827 aaKnown RBP20.68■□□□□ 0.9
PGBD2-201ENST00000329291 CHD2O14647 1828 aaKnown RBP20.67■□□□□ 0.9
PGBD2-201ENST00000329291 AATKQ6ZMQ8 1374 aa20.67■□□□□ 0.9
PGBD2-201ENST00000329291 IL13P35225 146 aa20.66■□□□□ 0.9
PGBD2-201ENST00000329291 RSPH6AQ9H0K4 717 aa20.66■□□□□ 0.9
PGBD2-201ENST00000329291 FCHSD2O94868 740 aa20.66■□□□□ 0.9
PGBD2-201ENST00000329291 MAPK8IP3Q9UPT6 1336 aa20.65■□□□□ 0.9
PGBD2-201ENST00000329291 HMOX1P09601 288 aa20.65■□□□□ 0.9
PGBD2-201ENST00000329291 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.65■□□□□ 0.9
PGBD2-201ENST00000329291 USP6P35125 1406 aa20.64■□□□□ 0.89
PGBD2-201ENST00000329291 RIPK4P57078 832 aa20.64■□□□□ 0.89
PGBD2-201ENST00000329291 PHACTR3Q96KR7 559 aa20.64■□□□□ 0.89
PGBD2-201ENST00000329291 ANKARQ7Z5J8 1434 aa20.64■□□□□ 0.89
PGBD2-201ENST00000329291 PRKAR2BP31323 418 aa20.63■□□□□ 0.89
PGBD2-201ENST00000329291 TSR2Q969E8 191 aaKnown RBP20.63■□□□□ 0.89
PGBD2-201ENST00000329291 SSH2Q76I76 1423 aa20.63■□□□□ 0.89
PGBD2-201ENST00000329291 RARSP54136 660 aaKnown RBP20.62■□□□□ 0.89
PGBD2-201ENST00000329291 NRKQ7Z2Y5 1582 aa20.62■□□□□ 0.89
PGBD2-201ENST00000329291 RBM33Q96EV2 1170 aaKnown RBP20.62■□□□□ 0.89
PGBD2-201ENST00000329291 CDK12Q9NYV4 1490 aaPredicted RBP20.61■□□□□ 0.89
PGBD2-201ENST00000329291 MYH16Q9H6N6 1097 aa20.6■□□□□ 0.89
PGBD2-201ENST00000329291 LRRC7Q96NW7 1537 aa20.6■□□□□ 0.89
PGBD2-201ENST00000329291 NGDNQ8NEJ9 315 aaKnown RBP20.6■□□□□ 0.89
PGBD2-201ENST00000329291 PNNQ9H307 717 aaKnown RBP20.6■□□□□ 0.89
PGBD2-201ENST00000329291 FMN2Q9NZ56 1722 aa20.6■□□□□ 0.89
PGBD2-201ENST00000329291 OVOS2A0A0J9YW53 1432 aa20.59■□□□□ 0.89
PGBD2-201ENST00000329291 OVOS2Q6IE36 1432 aa20.59■□□□□ 0.89
PGBD2-201ENST00000329291 FANCIQ9NVI1 1328 aa20.59■□□□□ 0.89
PGBD2-201ENST00000329291 RGPD8O14715 1765 aaPredicted RBP20.58■□□□□ 0.89
PGBD2-201ENST00000329291 BCL2L13Q9BXK5 485 aa20.57■□□□□ 0.88
PGBD2-201ENST00000329291 NALCNQ8IZF0 1738 aa20.57■□□□□ 0.88
PGBD2-201ENST00000329291 TTC21AQ8NDW8 1320 aa20.57■□□□□ 0.88
PGBD2-201ENST00000329291 SOX12O15370 315 aa20.56■□□□□ 0.88
PGBD2-201ENST00000329291 SKAP1Q86WV1 359 aa20.56■□□□□ 0.88
PGBD2-201ENST00000329291 EXOSC9Q06265 439 aaKnown RBP20.56■□□□□ 0.88
PGBD2-201ENST00000329291 PANK1Q8TE04 598 aa20.56■□□□□ 0.88
PGBD2-201ENST00000329291 FRAT1Q92837 279 aaPredicted RBP20.56■□□□□ 0.88
PGBD2-201ENST00000329291 TNNQ9UQP3 1299 aa20.56■□□□□ 0.88
PGBD2-201ENST00000329291 ADGRL3Q9HAR2 1447 aa20.54■□□□□ 0.88
PGBD2-201ENST00000329291 EIF4A2Q14240 407 aaKnown RBP20.54■□□□□ 0.88
PGBD2-201ENST00000329291 USP31Q70CQ4 1352 aa20.54■□□□□ 0.88
PGBD2-201ENST00000329291 PDE3AQ14432 1141 aa20.54■□□□□ 0.88
PGBD2-201ENST00000329291 NFE2L2Q16236 605 aa20.54■□□□□ 0.88
PGBD2-201ENST00000329291 IL16Q14005 1332 aa20.54■□□□□ 0.88
PGBD2-201ENST00000329291 KDM2BQ8NHM5 1336 aa20.54■□□□□ 0.88
PGBD2-201ENST00000329291 HSP90AB2PQ58FF8 381 aa20.53■□□□□ 0.88
PGBD2-201ENST00000329291 THUMPD2Q9BTF0 503 aaKnown RBP20.53■□□□□ 0.88
PGBD2-201ENST00000329291 NWD1Q149M9 1564 aa20.53■□□□□ 0.88
PGBD2-201ENST00000329291 AEBP1Q8IUX7 1158 aa20.52■□□□□ 0.88
PGBD2-201ENST00000329291 RLBP1P12271 317 aa20.51■□□□□ 0.87
PGBD2-201ENST00000329291 CANXP27824 592 aaKnown RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms