RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 NUDT16Q96DE0 195 aaKnown RBP33.78■■■■□ 3
TMEM54-201ENST00000329151 BTG4Q9NY30 223 aa33.78■■■■□ 3
TMEM54-201ENST00000329151 KIAA1210Q9ULL0 1709 aa33.77■■■■□ 3
TMEM54-201ENST00000329151 BLMP54132 1417 aaPredicted RBP33.77■■■■□ 3
TMEM54-201ENST00000329151 KRT27Q7Z3Y8 459 aa33.74■■■□□ 2.99
TMEM54-201ENST00000329151 CDK19Q9BWU1 502 aa33.73■■■□□ 2.99
TMEM54-201ENST00000329151 ATP7BP35670 1465 aa33.73■■■□□ 2.99
TMEM54-201ENST00000329151 PRDM11Q9NQV5 511 aa33.72■■■□□ 2.99
TMEM54-201ENST00000329151 NRAPQ86VF7 1730 aa33.72■■■□□ 2.99
TMEM54-201ENST00000329151 ONECUT3O60422 494 aaPredicted RBP33.69■■■□□ 2.98
TMEM54-201ENST00000329151 FAM98CQ17RN3 349 aaKnown RBP33.69■■■□□ 2.98
TMEM54-201ENST00000329151 CCDC61Q9Y6R9 512 aa33.65■■■□□ 2.98
TMEM54-201ENST00000329151 CRYBG1Q9Y4K1 1723 aa33.65■■■□□ 2.98
TMEM54-201ENST00000329151 ACEP12821 1306 aa33.62■■■□□ 2.97
TMEM54-201ENST00000329151 SRPK2P78362 688 aaKnown RBP33.62■■■□□ 2.97
TMEM54-201ENST00000329151 TOPAZ1Q8N9V7 1692 aa33.61■■■□□ 2.97
TMEM54-201ENST00000329151 DEFB132Q7Z7B7 95 aa33.61■■■□□ 2.97
TMEM54-201ENST00000329151 NBPF1Q3BBV0 1214 aa33.6■■■□□ 2.97
TMEM54-201ENST00000329151 NUTM2GQ5VZR2 741 aa33.6■■■□□ 2.97
TMEM54-201ENST00000329151 PHRF1Q9P1Y6 1649 aaKnown RBP33.6■■■□□ 2.97
TMEM54-201ENST00000329151 CENPJQ9HC77 1338 aaPredicted RBP33.59■■■□□ 2.97
TMEM54-201ENST00000329151 NBPF8Q3BBV2 869 aa33.59■■■□□ 2.97
TMEM54-201ENST00000329151 KIAA0232Q92628 1395 aa33.59■■■□□ 2.97
TMEM54-201ENST00000329151 SPATA31A5Q5VU36 1347 aa33.58■■■□□ 2.97
TMEM54-201ENST00000329151 SPATA31A7Q8IWB4 1347 aa33.58■■■□□ 2.97
TMEM54-201ENST00000329151 POLR3AO14802 1390 aaPredicted RBP33.58■■■□□ 2.97
TMEM54-201ENST00000329151 BAG6P46379 1132 aa33.57■■■□□ 2.96
TMEM54-201ENST00000329151 STRN4Q9NRL3 753 aa33.57■■■□□ 2.96
TMEM54-201ENST00000329151 ZC3H6P61129 1189 aaKnown RBP33.56■■■□□ 2.96
TMEM54-201ENST00000329151 CHRNA2Q15822 529 aa33.56■■■□□ 2.96
TMEM54-201ENST00000329151 ABTB2Q8N961 1025 aa33.56■■■□□ 2.96
TMEM54-201ENST00000329151 PLEKHG3A1L390 1219 aa33.55■■■□□ 2.96
TMEM54-201ENST00000329151 SRCAPQ6ZRS2 3230 aa33.55■■■□□ 2.96
TMEM54-201ENST00000329151 EVA1CP58658 441 aa33.54■■■□□ 2.96
TMEM54-201ENST00000329151 QRICH2Q9H0J4 1663 aa33.53■■■□□ 2.96
TMEM54-201ENST00000329151 PPIP5K1Q6PFW1 1433 aa33.52■■■□□ 2.96
TMEM54-201ENST00000329151 RGPD1P0DJD0 1748 aa33.5■■■□□ 2.95
TMEM54-201ENST00000329151 CABP2Q9NPB3 220 aa33.48■■■□□ 2.95
TMEM54-201ENST00000329151 NLRP13Q86W25 1043 aa33.47■■■□□ 2.95
TMEM54-201ENST00000329151 SPATA31A1Q5TZJ5 1347 aa33.47■■■□□ 2.95
TMEM54-201ENST00000329151 USP35Q9P2H5 1018 aa33.46■■■□□ 2.95
TMEM54-201ENST00000329151 THSD7AQ9UPZ6 1657 aa33.45■■■□□ 2.95
TMEM54-201ENST00000329151 L3MBTL2Q969R5 705 aa33.45■■■□□ 2.95
TMEM54-201ENST00000329151 FAM182BQ5T319 152 aa33.44■■■□□ 2.94
TMEM54-201ENST00000329151 NRKQ7Z2Y5 1582 aa33.43■■■□□ 2.94
TMEM54-201ENST00000329151 NEUROD1Q13562 356 aa33.42■■■□□ 2.94
TMEM54-201ENST00000329151 BRD4O60885 1362 aaPredicted RBP33.42■■■□□ 2.94
TMEM54-201ENST00000329151 EVC2Q86UK5 1308 aa33.4■■■□□ 2.94
TMEM54-201ENST00000329151 SSH2Q76I76 1423 aa33.39■■■□□ 2.94
TMEM54-201ENST00000329151 ZBTB7CA1YPR0 619 aa33.39■■■□□ 2.94
TMEM54-201ENST00000329151 USP19O94966 1318 aa33.38■■■□□ 2.93
TMEM54-201ENST00000329151 PDE3BQ13370 1112 aa33.38■■■□□ 2.93
TMEM54-201ENST00000329151 CABP1Q9NZU7 370 aa33.38■■■□□ 2.93
TMEM54-201ENST00000329151 ROCK2O75116 1388 aaKnown RBP33.37■■■□□ 2.93
TMEM54-201ENST00000329151 CPDO75976 1380 aa33.37■■■□□ 2.93
TMEM54-201ENST00000329151 FAM196AQ6ZSG2 479 aa33.37■■■□□ 2.93
TMEM54-201ENST00000329151 TRPM1Q7Z4N2 1603 aa33.37■■■□□ 2.93
TMEM54-201ENST00000329151 GCP02774 474 aa33.36■■■□□ 2.93
TMEM54-201ENST00000329151 EN1Q05925 392 aaPredicted RBP33.36■■■□□ 2.93
TMEM54-201ENST00000329151 SIN3AQ96ST3 1273 aa33.36■■■□□ 2.93
TMEM54-201ENST00000329151 NLRP6P59044 892 aa33.34■■■□□ 2.93
TMEM54-201ENST00000329151 LARP1Q6PKG0 1096 aaKnown RBP33.33■■■□□ 2.93
TMEM54-201ENST00000329151 BARGINQ6ZT62 677 aa33.33■■■□□ 2.93
TMEM54-201ENST00000329151 TCP11L2Q8N4U5 519 aa33.33■■■□□ 2.93
TMEM54-201ENST00000329151 CAMTA1Q9Y6Y1 1673 aa33.33■■■□□ 2.93
TMEM54-201ENST00000329151 PSDA5PKW4 1024 aaPredicted RBP33.32■■■□□ 2.92
TMEM54-201ENST00000329151 USP6P35125 1406 aa33.32■■■□□ 2.92
TMEM54-201ENST00000329151 TNS1Q9HBL0 1735 aaKnown RBP33.31■■■□□ 2.92
TMEM54-201ENST00000329151 LMO7Q8WWI1 1683 aa33.3■■■□□ 2.92
TMEM54-201ENST00000329151 TRIM37O94972 964 aa33.3■■■□□ 2.92
TMEM54-201ENST00000329151 THRAP3Q9Y2W1 955 aaKnown RBP33.29■■■□□ 2.92
TMEM54-201ENST00000329151 DISP2A7MBM2 1401 aa33.26■■■□□ 2.91
TMEM54-201ENST00000329151 APBA3O96018 575 aa33.25■■■□□ 2.91
TMEM54-201ENST00000329151 ZNF692Q9BU19 519 aaPredicted RBP33.24■■■□□ 2.91
TMEM54-201ENST00000329151 COL5A2P05997 1499 aaPredicted RBP33.24■■■□□ 2.91
TMEM54-201ENST00000329151 LRP5O75197 1615 aa33.24■■■□□ 2.91
TMEM54-201ENST00000329151 EZH2Q15910 746 aaKnown RBP33.22■■■□□ 2.91
TMEM54-201ENST00000329151 CRB1P82279 1406 aa33.21■■■□□ 2.91
TMEM54-201ENST00000329151 SLIT3O75094 1523 aa33.2■■■□□ 2.91
TMEM54-201ENST00000329151 R3HDM1Q15032 1099 aaKnown RBP33.2■■■□□ 2.91
TMEM54-201ENST00000329151 PIK3C2AO00443 1686 aa33.2■■■□□ 2.9
TMEM54-201ENST00000329151 TOM1L2Q6ZVM7 507 aa33.19■■■□□ 2.9
TMEM54-201ENST00000329151 AATKQ6ZMQ8 1374 aa33.19■■■□□ 2.9
TMEM54-201ENST00000329151 PARD3Q8TEW0 1356 aa33.19■■■□□ 2.9
TMEM54-201ENST00000329151 AKAP12Q02952 1782 aa33.19■■■□□ 2.9
TMEM54-201ENST00000329151 C11orf95C9JLR9 678 aaPredicted RBP33.18■■■□□ 2.9
TMEM54-201ENST00000329151 KCNH5Q8NCM2 988 aa33.18■■■□□ 2.9
TMEM54-201ENST00000329151 PARP4Q9UKK3 1724 aaKnown RBP33.17■■■□□ 2.9
TMEM54-201ENST00000329151 SOX12O15370 315 aa33.16■■■□□ 2.9
TMEM54-201ENST00000329151 TTC21BQ7Z4L5 1316 aa33.15■■■□□ 2.9
TMEM54-201ENST00000329151 TTC21AQ8NDW8 1320 aa33.15■■■□□ 2.9
TMEM54-201ENST00000329151 CAMKK2Q96RR4 588 aa33.14■■■□□ 2.9
TMEM54-201ENST00000329151 KTN1Q86UP2 1357 aaKnown RBP33.13■■■□□ 2.89
TMEM54-201ENST00000329151 CARD11Q9BXL7 1154 aa33.13■■■□□ 2.89
TMEM54-201ENST00000329151 CSB-PGBD3P0DP91 1061 aa33.12■■■□□ 2.89
TMEM54-201ENST00000329151 NBPF14Q5TI25 921 aa33.11■■■□□ 2.89
TMEM54-201ENST00000329151 TONSLQ96HA7 1378 aa33.1■■■□□ 2.89
TMEM54-201ENST00000329151 DDB1Q16531 1140 aa33.1■■■□□ 2.89
TMEM54-201ENST00000329151 CPSF1Q10570 1443 aaKnown RBP33.1■■■□□ 2.89
TMEM54-201ENST00000329151 OVOS2A0A0G2JMS6 1433 aa33.09■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms