RNA–Protein interactions for RNA: ENST00000327628.9

TRAK1-201, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAK1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-201ENST00000327628 WASHC4Q2M389 1173 aa15.95■□□□□ 0.14
TRAK1-201ENST00000327628 IL27Q8NEV9 243 aa15.95■□□□□ 0.14
TRAK1-201ENST00000327628 NLRP2Q9NX02 1062 aa15.95■□□□□ 0.14
TRAK1-201ENST00000327628 WDR63Q8IWG1 891 aa15.94■□□□□ 0.14
TRAK1-201ENST00000327628 FOXD4L5Q5VV16 416 aaPredicted RBP15.94■□□□□ 0.14
TRAK1-201ENST00000327628 FOXD4L4Q8WXT5 416 aaPredicted RBP15.94■□□□□ 0.14
TRAK1-201ENST00000327628 CCDC158Q5M9N0 1113 aa15.94■□□□□ 0.14
TRAK1-201ENST00000327628 FSD1Q9BTV5 496 aa15.94■□□□□ 0.14
TRAK1-201ENST00000327628 OFD1O75665 1012 aa15.93■□□□□ 0.14
TRAK1-201ENST00000327628 NACAP1Q9BZK3 213 aa15.93■□□□□ 0.14
TRAK1-201ENST00000327628 SPG7Q9UQ90 795 aa15.93■□□□□ 0.14
TRAK1-201ENST00000327628 RRP12Q5JTH9 1297 aaKnown RBP15.93■□□□□ 0.14
TRAK1-201ENST00000327628 GNAI2P04899 355 aa15.93■□□□□ 0.14
TRAK1-201ENST00000327628 NLRP6P59044 892 aa15.93■□□□□ 0.14
TRAK1-201ENST00000327628 KRI1Q8N9T8 703 aaKnown RBP15.92■□□□□ 0.14
TRAK1-201ENST00000327628 MAGEC2Q9UBF1 373 aaPredicted RBP15.92■□□□□ 0.14
TRAK1-201ENST00000327628 CAVIN1Q6NZI2 390 aaKnown RBP15.92■□□□□ 0.14
TRAK1-201ENST00000327628 SYTL4Q96C24 671 aaPredicted RBP15.92■□□□□ 0.14
TRAK1-201ENST00000327628 NEUROD6Q96NK8 337 aa15.92■□□□□ 0.14
TRAK1-201ENST00000327628 RAD21O60216 631 aa15.91■□□□□ 0.14
TRAK1-201ENST00000327628 TROQ12816 1431 aaPredicted RBP15.91■□□□□ 0.14
TRAK1-201ENST00000327628 KINO60870 393 aaKnown RBP15.91■□□□□ 0.14
TRAK1-201ENST00000327628 C9orf84Q5VXU9 1444 aa15.91■□□□□ 0.14
TRAK1-201ENST00000327628 CDKL5O76039 1030 aa15.9■□□□□ 0.14
TRAK1-201ENST00000327628 CNKSR2Q8WXI2 1034 aa15.9■□□□□ 0.14
TRAK1-201ENST00000327628 FBXW7Q969H0 707 aa15.9■□□□□ 0.14
TRAK1-201ENST00000327628 CWC15Q9P013 229 aaKnown RBP15.9■□□□□ 0.14
TRAK1-201ENST00000327628 CDK5RAP3Q96JB5 506 aa15.9■□□□□ 0.14
TRAK1-201ENST00000327628 RAD54L2Q9Y4B4 1467 aa15.9■□□□□ 0.14
TRAK1-201ENST00000327628 HMGXB3Q12766 1538 aa15.9■□□□□ 0.14
TRAK1-201ENST00000327628 CCDC141Q6ZP82 1450 aa15.9■□□□□ 0.14
TRAK1-201ENST00000327628 PDE4CQ08493 712 aa15.89■□□□□ 0.13
TRAK1-201ENST00000327628 STIM1Q13586 685 aa15.89■□□□□ 0.13
TRAK1-201ENST00000327628 CFTRP13569 1480 aa15.89■□□□□ 0.13
TRAK1-201ENST00000327628 PLIN1O60240 522 aa15.89■□□□□ 0.13
TRAK1-201ENST00000327628 CCAR1Q8IX12 1150 aaKnown RBP15.89■□□□□ 0.13
TRAK1-201ENST00000327628 SDF4Q9BRK5 362 aa15.88■□□□□ 0.13
TRAK1-201ENST00000327628 HMGN5P82970 282 aaKnown RBP15.88■□□□□ 0.13
TRAK1-201ENST00000327628 CCDC27Q2M243 656 aa15.88■□□□□ 0.13
TRAK1-201ENST00000327628 TRIM22Q8IYM9 498 aa15.88■□□□□ 0.13
TRAK1-201ENST00000327628 ZSCAN31Q96LW9 406 aaPredicted RBP15.88■□□□□ 0.13
TRAK1-201ENST00000327628 CTNNA3Q9UI47 895 aa15.88■□□□□ 0.13
TRAK1-201ENST00000327628 PRG4Q92954 1404 aaPredicted RBP15.88■□□□□ 0.13
TRAK1-201ENST00000327628 ERLIN2O94905 339 aa15.88■□□□□ 0.13
TRAK1-201ENST00000327628 KRT32Q14532 448 aa15.88■□□□□ 0.13
TRAK1-201ENST00000327628 ZNF592Q92610 1267 aa15.88■□□□□ 0.13
TRAK1-201ENST00000327628 NAP1L1P55209 391 aaKnown RBP15.87■□□□□ 0.13
TRAK1-201ENST00000327628 ANKRD18AQ8IVF6 992 aa15.87■□□□□ 0.13
TRAK1-201ENST00000327628 ZRSR2Q15696 482 aaKnown RBP15.87■□□□□ 0.13
TRAK1-201ENST00000327628 NOL7Q9UMY1 257 aaKnown RBP15.87■□□□□ 0.13
TRAK1-201ENST00000327628 SYCP1Q15431 976 aa15.87■□□□□ 0.13
TRAK1-201ENST00000327628 TTC39AQ5SRH9 613 aa15.87■□□□□ 0.13
TRAK1-201ENST00000327628 FAM43AQ8N2R8 423 aa15.87■□□□□ 0.13
TRAK1-201ENST00000327628 WASF1Q92558 559 aa15.87■□□□□ 0.13
TRAK1-201ENST00000327628 DNAI2Q9GZS0 605 aa15.87■□□□□ 0.13
TRAK1-201ENST00000327628 CBFA2T2O43439 604 aa15.86■□□□□ 0.13
TRAK1-201ENST00000327628 ZNHIT6Q9NWK9 470 aaKnown RBP15.86■□□□□ 0.13
TRAK1-201ENST00000327628 RUSC2Q8N2Y8 1516 aa15.86■□□□□ 0.13
TRAK1-201ENST00000327628 PPP2R1AP30153 589 aa15.86■□□□□ 0.13
TRAK1-201ENST00000327628 ZNF771Q7L3S4 317 aaPredicted RBP15.86■□□□□ 0.13
TRAK1-201ENST00000327628 IFT57Q9NWB7 429 aa15.86■□□□□ 0.13
TRAK1-201ENST00000327628 CCDC57Q2TAC2 916 aa15.86■□□□□ 0.13
TRAK1-201ENST00000327628 TWISTNBQ3B726 338 aaPredicted RBP15.86■□□□□ 0.13
TRAK1-201ENST00000327628 LNPKQ9C0E8 428 aa15.86■□□□□ 0.13
TRAK1-201ENST00000327628 ABTB2Q8N961 1025 aa15.85■□□□□ 0.13
TRAK1-201ENST00000327628 SURF6O75683 361 aaKnown RBP15.85■□□□□ 0.13
TRAK1-201ENST00000327628 TXNDC2Q86VQ3 553 aa15.85■□□□□ 0.13
TRAK1-201ENST00000327628 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.85■□□□□ 0.132e-6■■■■■ 140.6
TRAK1-201ENST00000327628 HSP90AB2PQ58FF8 381 aa15.85■□□□□ 0.13
TRAK1-201ENST00000327628 TCP11L2Q8N4U5 519 aa15.85■□□□□ 0.13
TRAK1-201ENST00000327628 GGNBP2Q9H3C7 697 aa15.85■□□□□ 0.13
TRAK1-201ENST00000327628 MTHFSP49914 203 aa15.85■□□□□ 0.13
TRAK1-201ENST00000327628 CIZ1Q9ULV3 898 aaPredicted RBP15.85■□□□□ 0.13
TRAK1-201ENST00000327628 POLA1P09884 1462 aaPredicted RBP15.85■□□□□ 0.13
TRAK1-201ENST00000327628 TSPY26PQ9H489 355 aa15.84■□□□□ 0.13
TRAK1-201ENST00000327628 SUPT6HQ7KZ85 1726 aaKnown RBP15.84■□□□□ 0.13
TRAK1-201ENST00000327628 WDR33Q9C0J8 1336 aaKnown RBP15.84■□□□□ 0.13
TRAK1-201ENST00000327628 DESP17661 470 aa15.84■□□□□ 0.13
TRAK1-201ENST00000327628 RTEL1-TNFRSF6BF6WH68 1400 aa15.84■□□□□ 0.13
TRAK1-201ENST00000327628 CYP46A1Q9Y6A2 500 aa15.84■□□□□ 0.13
TRAK1-201ENST00000327628 PROSER2Q86WR7 435 aaPredicted RBP15.83■□□□□ 0.13
TRAK1-201ENST00000327628 CAGE1Q8TC20 777 aa15.83■□□□□ 0.13
TRAK1-201ENST00000327628 CABP2Q9NPB3 220 aa15.83■□□□□ 0.13
TRAK1-201ENST00000327628 IQCEQ6IPM2 695 aa15.83■□□□□ 0.12
TRAK1-201ENST00000327628 HMOX1P09601 288 aa15.83■□□□□ 0.12
TRAK1-201ENST00000327628 ABCC11Q96J66 1382 aa15.83■□□□□ 0.12
TRAK1-201ENST00000327628 FAM13BQ9NYF5 915 aa15.82■□□□□ 0.12
TRAK1-201ENST00000327628 CCDC191Q8NCU4 936 aa15.82■□□□□ 0.12
TRAK1-201ENST00000327628 KCNH5Q8NCM2 988 aa15.82■□□□□ 0.12
TRAK1-201ENST00000327628 LRRCC1Q9C099 1032 aa15.82■□□□□ 0.12
TRAK1-201ENST00000327628 NASPP49321 788 aaPredicted RBP15.82■□□□□ 0.12
TRAK1-201ENST00000327628 ZNF287Q9HBT7 754 aa15.82■□□□□ 0.12
TRAK1-201ENST00000327628 STK38Q15208 465 aa15.81■□□□□ 0.12
TRAK1-201ENST00000327628 ERBINQ96RT1 1412 aa15.81■□□□□ 0.12
TRAK1-201ENST00000327628 PRKAR2BP31323 418 aa15.81■□□□□ 0.12
TRAK1-201ENST00000327628 CNNM1Q9NRU3 951 aa15.81■□□□□ 0.12
TRAK1-201ENST00000327628 AQRO60306 1485 aaKnown RBP eCLIP15.81■□□□□ 0.122e-8■■■■□ 22.9
TRAK1-201ENST00000327628 IKQ13123 557 aaPredicted RBP15.81■□□□□ 0.12
TRAK1-201ENST00000327628 AIMP1Q12904 312 aaKnown RBP15.81■□□□□ 0.12
TRAK1-201ENST00000327628 SOGA3Q5TF21 947 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms