RNA–Protein interactions for RNA: ENST00000324941.4

VPS37D-201, Transcript of VPS37D, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS37D, Length 1,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37D-201ENST00000324941 SCAF1Q9H7N4 1312 aaKnown RBP37.22■■■■□ 3.55
VPS37D-201ENST00000324941 BLMP54132 1417 aaPredicted RBP37.21■■■■□ 3.55
VPS37D-201ENST00000324941 C19orf44Q9H6X5 657 aa37.21■■■■□ 3.55
VPS37D-201ENST00000324941 NCOA3Q9Y6Q9 1424 aa37.2■■■■□ 3.55
VPS37D-201ENST00000324941 NRKQ7Z2Y5 1582 aa37.2■■■■□ 3.54
VPS37D-201ENST00000324941 TTC21AQ8NDW8 1320 aa37.19■■■■□ 3.54
VPS37D-201ENST00000324941 PHF8Q9UPP1 1060 aa37.19■■■■□ 3.54
VPS37D-201ENST00000324941 SSH2Q76I76 1423 aa37.17■■■■□ 3.54
VPS37D-201ENST00000324941 TMEM94Q12767 1356 aa37.16■■■■□ 3.54
VPS37D-201ENST00000324941 ZRANB1Q9UGI0 708 aa37.16■■■■□ 3.54
VPS37D-201ENST00000324941 STRCP1A6NGW2 1772 aa37.15■■■■□ 3.54
VPS37D-201ENST00000324941 ESCO1Q5FWF5 840 aa37.14■■■■□ 3.54
VPS37D-201ENST00000324941 AATKQ6ZMQ8 1374 aa37.11■■■■□ 3.53
VPS37D-201ENST00000324941 ATF3P18847 181 aa37.09■■■■□ 3.53
VPS37D-201ENST00000324941 DMRT2Q9Y5R5 561 aa37.09■■■■□ 3.53
VPS37D-201ENST00000324941 POLKQ9UBT6 870 aa37.08■■■■□ 3.53
VPS37D-201ENST00000324941 NUDCQ9Y266 331 aa37.07■■■■□ 3.52
VPS37D-201ENST00000324941 DCCP43146 1447 aa37.06■■■■□ 3.52
VPS37D-201ENST00000324941 SENP3-EIF4A1A0A087X0R7 540 aa37.06■■■■□ 3.52
VPS37D-201ENST00000324941 SHPRHQ149N8 1683 aa37.05■■■■□ 3.52
VPS37D-201ENST00000324941 OVOS2A0A0J9YW53 1432 aa37.05■■■■□ 3.52
VPS37D-201ENST00000324941 OVOS2Q6IE36 1432 aa37.05■■■■□ 3.52
VPS37D-201ENST00000324941 PNPLA6Q8IY17 1366 aa37.03■■■■□ 3.52
VPS37D-201ENST00000324941 FBLN1P23142 703 aa37.02■■■■□ 3.52
VPS37D-201ENST00000324941 PSME1Q06323 249 aa37.02■■■■□ 3.52
VPS37D-201ENST00000324941 USP31Q70CQ4 1352 aa37.02■■■■□ 3.52
VPS37D-201ENST00000324941 PPM1GO15355 546 aaPredicted RBP37.01■■■■□ 3.52
VPS37D-201ENST00000324941 ORAI2Q96SN7 254 aa37.01■■■■□ 3.52
VPS37D-201ENST00000324941 C1orf167Q5SNV9 1468 aa37■■■■□ 3.51
VPS37D-201ENST00000324941 MSH6P52701 1360 aa37■■■■□ 3.51
VPS37D-201ENST00000324941 CADPS2Q86UW7 1296 aa37■■■■□ 3.51
VPS37D-201ENST00000324941 SALL2Q9Y467 1007 aaPredicted RBP37■■■■□ 3.51
VPS37D-201ENST00000324941 GTF3C3Q9Y5Q9 886 aa37■■■■□ 3.51
VPS37D-201ENST00000324941 DIAPH1O60610 1272 aaKnown RBP36.99■■■■□ 3.51
VPS37D-201ENST00000324941 COL3A1P02461 1466 aaPredicted RBP36.99■■■■□ 3.51
VPS37D-201ENST00000324941 ZNF335Q9H4Z2 1342 aaPredicted RBP36.99■■■■□ 3.51
VPS37D-201ENST00000324941 PAK3O75914 559 aaPredicted RBP36.99■■■■□ 3.51
VPS37D-201ENST00000324941 CCDC146Q8IYE0 955 aa36.99■■■■□ 3.51
VPS37D-201ENST00000324941 MAP2P11137 1827 aaKnown RBP36.98■■■■□ 3.51
VPS37D-201ENST00000324941 SMG6Q86US8 1419 aaKnown RBP36.98■■■■□ 3.51
VPS37D-201ENST00000324941 U2AF1L5P0DN76 240 aaPredicted RBP36.96■■■■□ 3.51
VPS37D-201ENST00000324941 U2AF1Q01081 240 aaKnown RBP eCLIP36.96■■■■□ 3.51
VPS37D-201ENST00000324941 EMILIN1Q9Y6C2 1016 aa36.96■■■■□ 3.51
VPS37D-201ENST00000324941 NLRP6P59044 892 aa36.95■■■■□ 3.51
VPS37D-201ENST00000324941 PDE3BQ13370 1112 aa36.95■■■■□ 3.51
VPS37D-201ENST00000324941 ABTB2Q8N961 1025 aa36.95■■■■□ 3.51
VPS37D-201ENST00000324941 MST1RQ04912 1400 aa36.93■■■■□ 3.5
VPS37D-201ENST00000324941 LRRC7Q96NW7 1537 aa36.93■■■■□ 3.5
VPS37D-201ENST00000324941 U2SURPO15042 1029 aaKnown RBP36.93■■■■□ 3.5
VPS37D-201ENST00000324941 RRS1Q15050 365 aaKnown RBP36.93■■■■□ 3.5
VPS37D-201ENST00000324941 RUNDC1Q96C34 613 aa36.92■■■■□ 3.5
VPS37D-201ENST00000324941 CDK12Q9NYV4 1490 aaPredicted RBP36.92■■■■□ 3.5
VPS37D-201ENST00000324941 PIK3C2AO00443 1686 aa36.92■■■■□ 3.5
VPS37D-201ENST00000324941 FOXO3O43524 673 aa36.92■■■■□ 3.5
VPS37D-201ENST00000324941 KIF1AQ12756 1690 aa36.91■■■■□ 3.5
VPS37D-201ENST00000324941 NGEFQ8N5V2 710 aa36.91■■■■□ 3.5
VPS37D-201ENST00000324941 APAF1O14727 1248 aa36.9■■■■□ 3.5
VPS37D-201ENST00000324941 PNNQ9H307 717 aaKnown RBP36.85■■■■□ 3.49
VPS37D-201ENST00000324941 XIRP1Q702N8 1843 aaKnown RBP36.85■■■■□ 3.49
VPS37D-201ENST00000324941 NUTM2GQ5VZR2 741 aa36.85■■■■□ 3.49
VPS37D-201ENST00000324941 SOX12O15370 315 aa36.84■■■■□ 3.49
VPS37D-201ENST00000324941 KRT28Q7Z3Y7 464 aa36.84■■■■□ 3.49
VPS37D-201ENST00000324941 USP54Q70EL1 1684 aa36.83■■■■□ 3.49
VPS37D-201ENST00000324941 IL13P35225 146 aa36.81■■■■□ 3.48
VPS37D-201ENST00000324941 XPCQ01831 940 aaPredicted RBP36.78■■■■□ 3.48
VPS37D-201ENST00000324941 TCP11L2Q8N4U5 519 aa36.77■■■■□ 3.48
VPS37D-201ENST00000324941 MAP3K19Q56UN5 1328 aa36.77■■■■□ 3.48
VPS37D-201ENST00000324941 FCHSD2O94868 740 aa36.77■■■■□ 3.48
VPS37D-201ENST00000324941 ZNF521Q96K83 1311 aa36.75■■■■□ 3.47
VPS37D-201ENST00000324941 SBNO1A3KN83 1393 aa36.74■■■■□ 3.47
VPS37D-201ENST00000324941 AMPHP49418 695 aa36.74■■■■□ 3.47
VPS37D-201ENST00000324941 PLEKHF1Q96S99 279 aa36.74■■■■□ 3.47
VPS37D-201ENST00000324941 MARF1Q9Y4F3 1742 aaKnown RBP36.73■■■■□ 3.47
VPS37D-201ENST00000324941 NPHP3Q7Z494 1330 aa36.73■■■■□ 3.47
VPS37D-201ENST00000324941 MAPK8IP3Q9UPT6 1336 aa36.73■■■■□ 3.47
VPS37D-201ENST00000324941 NCBP3Q53F19 620 aaKnown RBP36.73■■■■□ 3.47
VPS37D-201ENST00000324941 GOLGA2Q08379 1002 aa36.72■■■■□ 3.47
VPS37D-201ENST00000324941 KCNH5Q8NCM2 988 aa36.72■■■■□ 3.47
VPS37D-201ENST00000324941 CDCA7LQ96GN5 454 aa36.72■■■■□ 3.47
VPS37D-201ENST00000324941 SUPT16HQ9Y5B9 1047 aaKnown RBP36.72■■■■□ 3.47
VPS37D-201ENST00000324941 IQSEC2Q5JU85 1478 aa36.71■■■■□ 3.47
VPS37D-201ENST00000324941 FLT4P35916 1363 aa36.71■■■■□ 3.47
VPS37D-201ENST00000324941 KIF24Q5T7B8 1368 aa36.71■■■■□ 3.47
VPS37D-201ENST00000324941 TRPM3Q9HCF6 1732 aaPredicted RBP36.7■■■■□ 3.47
VPS37D-201ENST00000324941 NEFMP07197 916 aa36.7■■■■□ 3.47
VPS37D-201ENST00000324941 EIF4A2Q14240 407 aaKnown RBP36.7■■■■□ 3.47
VPS37D-201ENST00000324941 HSP90AB2PQ58FF8 381 aa36.7■■■■□ 3.47
VPS37D-201ENST00000324941 LMOD2Q6P5Q4 547 aa36.7■■■■□ 3.47
VPS37D-201ENST00000324941 SLAIN2Q9P270 581 aa36.7■■■■□ 3.47
VPS37D-201ENST00000324941 PEAK1Q9H792 1746 aa36.69■■■■□ 3.46
VPS37D-201ENST00000324941 NEFLP07196 543 aa36.69■■■■□ 3.46
VPS37D-201ENST00000324941 RSPH6AQ9H0K4 717 aa36.68■■■■□ 3.46
VPS37D-201ENST00000324941 NEUROD2Q15784 382 aa36.67■■■■□ 3.46
VPS37D-201ENST00000324941 RRP7AQ9Y3A4 280 aaKnown RBP36.67■■■■□ 3.46
VPS37D-201ENST00000324941 CCDC27Q2M243 656 aa36.66■■■■□ 3.46
VPS37D-201ENST00000324941 BRINP3Q76B58 766 aa36.65■■■■□ 3.46
VPS37D-201ENST00000324941 WWC1Q8IX03 1113 aa36.65■■■■□ 3.46
VPS37D-201ENST00000324941 HMOX1P09601 288 aa36.64■■■■□ 3.46
VPS37D-201ENST00000324941 PRKAR2BP31323 418 aa36.64■■■■□ 3.46
VPS37D-201ENST00000324941 DDX17Q92841 729 aaKnown RBP36.63■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms