RNA–Protein interactions for RNA: ENST00000323250.9

TYMS-202, Transcript of thymidylate synthetase, humanhuman

TSL 1 (best) BASIC

Gene TYMS, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYMS-202ENST00000323250 ITSN1Q15811 1721 aa25.24■■□□□ 1.63
TYMS-202ENST00000323250 UNC5CLQ8IV45 518 aa25.24■■□□□ 1.63
TYMS-202ENST00000323250 ABCA3Q99758 1704 aa25.23■■□□□ 1.63
TYMS-202ENST00000323250 PPIP5K1Q6PFW1 1433 aa25.22■■□□□ 1.63
TYMS-202ENST00000323250 UPF1Q92900 1129 aaKnown RBP eCLIP25.22■■□□□ 1.63
TYMS-202ENST00000323250 GJD4Q96KN9 370 aaPredicted RBP25.22■■□□□ 1.63
TYMS-202ENST00000323250 NUTM2GQ5VZR2 741 aa25.21■■□□□ 1.63
TYMS-202ENST00000323250 CABP1Q9NZU7 370 aa25.21■■□□□ 1.63
TYMS-202ENST00000323250 CARD11Q9BXL7 1154 aa25.2■■□□□ 1.62
TYMS-202ENST00000323250 EVC2Q86UK5 1308 aa25.18■■□□□ 1.62
TYMS-202ENST00000323250 RALGAPBQ86X10 1494 aa25.18■■□□□ 1.62
TYMS-202ENST00000323250 CRYBG1Q9Y4K1 1723 aa25.15■■□□□ 1.62
TYMS-202ENST00000323250 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.15■■□□□ 1.62
TYMS-202ENST00000323250 GLI3P10071 1580 aa25.14■■□□□ 1.62
TYMS-202ENST00000323250 VPS72Q15906 364 aa25.14■■□□□ 1.62
TYMS-202ENST00000323250 PCGF6Q9BYE7 350 aa25.13■■□□□ 1.61
TYMS-202ENST00000323250 BTG4Q9NY30 223 aa25.13■■□□□ 1.61
TYMS-202ENST00000323250 PLCH1Q4KWH8 1693 aa25.13■■□□□ 1.61
TYMS-202ENST00000323250 ABTB2Q8N961 1025 aa25.12■■□□□ 1.61
TYMS-202ENST00000323250 KIAA0232Q92628 1395 aa25.1■■□□□ 1.61
TYMS-202ENST00000323250 SBNO2Q9Y2G9 1366 aa25.09■■□□□ 1.61
TYMS-202ENST00000323250 ZC3H6P61129 1189 aaKnown RBP25.09■■□□□ 1.61
TYMS-202ENST00000323250 CHRNA2Q15822 529 aa25.09■■□□□ 1.61
TYMS-202ENST00000323250 PRDM11Q9NQV5 511 aa25.09■■□□□ 1.61
TYMS-202ENST00000323250 USP6P35125 1406 aa25.09■■□□□ 1.61
TYMS-202ENST00000323250 NWD2Q9ULI1 1742 aa25.09■■□□□ 1.61
TYMS-202ENST00000323250 SSH2Q76I76 1423 aa25.08■■□□□ 1.61
TYMS-202ENST00000323250 USP19O94966 1318 aa25.08■■□□□ 1.6
TYMS-202ENST00000323250 CCDC9Q9Y3X0 531 aaKnown RBP25.07■■□□□ 1.6
TYMS-202ENST00000323250 EP400Q96L91 3159 aa25.07■■□□□ 1.6
TYMS-202ENST00000323250 COL14A1Q05707 1796 aaKnown RBP25.05■■□□□ 1.6
TYMS-202ENST00000323250 PHRF1Q9P1Y6 1649 aaKnown RBP25.05■■□□□ 1.6
TYMS-202ENST00000323250 ONECUT3O60422 494 aaPredicted RBP25.05■■□□□ 1.6
TYMS-202ENST00000323250 NRAPQ86VF7 1730 aa25.05■■□□□ 1.6
TYMS-202ENST00000323250 SEPT12Q8IYM1 358 aa25.04■■□□□ 1.6
TYMS-202ENST00000323250 BRD4O60885 1362 aaPredicted RBP25.04■■□□□ 1.6
TYMS-202ENST00000323250 NLRP13Q86W25 1043 aa25.03■■□□□ 1.6
TYMS-202ENST00000323250 ATAD2Q6PL18 1390 aa25.03■■□□□ 1.6
TYMS-202ENST00000323250 ST20-MTHFSA0A0A6YYL1 179 aa25.02■■□□□ 1.6
TYMS-202ENST00000323250 GCP02774 474 aa25.02■■□□□ 1.6
TYMS-202ENST00000323250 TESK2Q96S53 571 aa25.02■■□□□ 1.6
TYMS-202ENST00000323250 CPSF1Q10570 1443 aaKnown RBP25.02■■□□□ 1.6
TYMS-202ENST00000323250 NRKQ7Z2Y5 1582 aa25.01■■□□□ 1.59
TYMS-202ENST00000323250 NLRP6P59044 892 aa25.01■■□□□ 1.59
TYMS-202ENST00000323250 ZNF692Q9BU19 519 aaPredicted RBP25■■□□□ 1.59
TYMS-202ENST00000323250 SPATA31A5Q5VU36 1347 aa25■■□□□ 1.59
TYMS-202ENST00000323250 TTC21BQ7Z4L5 1316 aa25■■□□□ 1.59
TYMS-202ENST00000323250 SPATA31A7Q8IWB4 1347 aa25■■□□□ 1.59
TYMS-202ENST00000323250 FAM98CQ17RN3 349 aaKnown RBP24.99■■□□□ 1.59
TYMS-202ENST00000323250 CPDO75976 1380 aa24.98■■□□□ 1.59
TYMS-202ENST00000323250 CD163L1Q9NR16 1453 aa24.97■■□□□ 1.59
TYMS-202ENST00000323250 SLC12A5Q9H2X9 1139 aa24.97■■□□□ 1.59
TYMS-202ENST00000323250 STRN4Q9NRL3 753 aa24.97■■□□□ 1.59
TYMS-202ENST00000323250 KTN1Q86UP2 1357 aaKnown RBP24.95■■□□□ 1.59
TYMS-202ENST00000323250 PIK3C2AO00443 1686 aa24.95■■□□□ 1.58
TYMS-202ENST00000323250 CAMTA1Q9Y6Y1 1673 aa24.95■■□□□ 1.58
TYMS-202ENST00000323250 CLSPNQ9HAW4 1339 aa24.95■■□□□ 1.58
TYMS-202ENST00000323250 TMC1Q8TDI8 760 aa24.95■■□□□ 1.58
TYMS-202ENST00000323250 BRWD3Q6RI45 1802 aa24.93■■□□□ 1.58
TYMS-202ENST00000323250 AKAP12Q02952 1782 aa24.93■■□□□ 1.58
TYMS-202ENST00000323250 SPATA31A1Q5TZJ5 1347 aa24.93■■□□□ 1.58
TYMS-202ENST00000323250 SLIT3O75094 1523 aa24.93■■□□□ 1.58
TYMS-202ENST00000323250 ZRANB1Q9UGI0 708 aa24.93■■□□□ 1.58
TYMS-202ENST00000323250 KRT27Q7Z3Y8 459 aa24.92■■□□□ 1.58
TYMS-202ENST00000323250 TIMELESSQ9UNS1 1208 aa24.92■■□□□ 1.58
TYMS-202ENST00000323250 TTC21AQ8NDW8 1320 aa24.91■■□□□ 1.58
TYMS-202ENST00000323250 A0A0G2JS52 829 aa24.91■■□□□ 1.58
TYMS-202ENST00000323250 MYT1Q01538 1121 aa24.91■■□□□ 1.58
TYMS-202ENST00000323250 LARP1Q6PKG0 1096 aaKnown RBP24.91■■□□□ 1.58
TYMS-202ENST00000323250 PUS7Q96PZ0 661 aaKnown RBP24.91■■□□□ 1.58
TYMS-202ENST00000323250 USP47Q96K76 1375 aa24.91■■□□□ 1.58
TYMS-202ENST00000323250 LMO7Q8WWI1 1683 aa24.91■■□□□ 1.58
TYMS-202ENST00000323250 ZBTB7CA1YPR0 619 aa24.9■■□□□ 1.58
TYMS-202ENST00000323250 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.9■■□□□ 1.58
TYMS-202ENST00000323250 EVA1CP58658 441 aa24.89■■□□□ 1.58
TYMS-202ENST00000323250 NME9Q86XW9 330 aa24.88■■□□□ 1.57
TYMS-202ENST00000323250 USP35Q9P2H5 1018 aa24.88■■□□□ 1.57
TYMS-202ENST00000323250 SOX12O15370 315 aa24.87■■□□□ 1.57
TYMS-202ENST00000323250 AXIN2Q9Y2T1 843 aa24.87■■□□□ 1.57
TYMS-202ENST00000323250 A0A1W2PP64 1363 aa24.86■■□□□ 1.57
TYMS-202ENST00000323250 AATKQ6ZMQ8 1374 aa24.86■■□□□ 1.57
TYMS-202ENST00000323250 FAM182BQ5T319 152 aa24.86■■□□□ 1.57
TYMS-202ENST00000323250 ARHGEF25Q86VW2 580 aa24.86■■□□□ 1.57
TYMS-202ENST00000323250 MON2Q7Z3U7 1717 aa24.86■■□□□ 1.57
TYMS-202ENST00000323250 HDGFL2Q7Z4V5 671 aaPredicted RBP24.85■■□□□ 1.57
TYMS-202ENST00000323250 CCER1Q8TC90 406 aaPredicted RBP24.85■■□□□ 1.57
TYMS-202ENST00000323250 COL5A2P05997 1499 aaPredicted RBP24.84■■□□□ 1.57
TYMS-202ENST00000323250 CCDC125Q86Z20 511 aa24.84■■□□□ 1.57
TYMS-202ENST00000323250 THSD7AQ9UPZ6 1657 aa24.84■■□□□ 1.57
TYMS-202ENST00000323250 USP31Q70CQ4 1352 aa24.83■■□□□ 1.57
TYMS-202ENST00000323250 KCNH5Q8NCM2 988 aa24.82■■□□□ 1.56
TYMS-202ENST00000323250 TERF2IPQ9NYB0 399 aa24.82■■□□□ 1.56
TYMS-202ENST00000323250 BLMP54132 1417 aaPredicted RBP24.81■■□□□ 1.56
TYMS-202ENST00000323250 COL18A1P39060 1754 aa24.81■■□□□ 1.56
TYMS-202ENST00000323250 BARGINQ6ZT62 677 aa24.81■■□□□ 1.56
TYMS-202ENST00000323250 NFAT5O94916 1531 aa24.81■■□□□ 1.56
TYMS-202ENST00000323250 EDC4Q6P2E9 1401 aaKnown RBP24.8■■□□□ 1.56
TYMS-202ENST00000323250 TCP11L2Q8N4U5 519 aa24.8■■□□□ 1.56
TYMS-202ENST00000323250 SLC24A1O60721 1099 aa24.79■■□□□ 1.56
TYMS-202ENST00000323250 TMF1P82094 1093 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms