RNA–Protein interactions for RNA: ENST00000321358.11

YBX1-201, Transcript of Y-box binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YBX1, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-201ENST00000321358 TTC21BQ7Z4L5 1316 aa28.95■■■□□ 2.23
YBX1-201ENST00000321358 TTC21AQ8NDW8 1320 aa28.95■■■□□ 2.23
YBX1-201ENST00000321358 LMOD2Q6P5Q4 547 aa28.94■■■□□ 2.22
YBX1-201ENST00000321358 PER1O15534 1290 aaPredicted RBP28.93■■■□□ 2.22
YBX1-201ENST00000321358 LRRC59Q96AG4 307 aaKnown RBP28.93■■■□□ 2.22
YBX1-201ENST00000321358 SBNO1A3KN83 1393 aa28.93■■■□□ 2.22
YBX1-201ENST00000321358 ABTB2Q8N961 1025 aa28.92■■■□□ 2.22
YBX1-201ENST00000321358 SSH2Q76I76 1423 aa28.89■■■□□ 2.22
YBX1-201ENST00000321358 PXDNQ92626 1479 aa28.89■■■□□ 2.21
YBX1-201ENST00000321358 AHDC1Q5TGY3 1603 aaPredicted RBP28.88■■■□□ 2.21
YBX1-201ENST00000321358 SPATA31A3Q5VYP0 1347 aa28.87■■■□□ 2.21
YBX1-201ENST00000321358 FYB1O15117 783 aa28.86■■■□□ 2.21
YBX1-201ENST00000321358 NLRP6P59044 892 aa28.86■■■□□ 2.21
YBX1-201ENST00000321358 NME9Q86XW9 330 aa28.86■■■□□ 2.21
YBX1-201ENST00000321358 AKAP12Q02952 1782 aa28.86■■■□□ 2.21
YBX1-201ENST00000321358 ARHGEF10O15013 1369 aa28.86■■■□□ 2.21
YBX1-201ENST00000321358 NLRP13Q86W25 1043 aa28.85■■■□□ 2.21
YBX1-201ENST00000321358 TNS3Q68CZ2 1445 aa28.85■■■□□ 2.21
YBX1-201ENST00000321358 AMER1Q5JTC6 1135 aaPredicted RBP28.84■■■□□ 2.21
YBX1-201ENST00000321358 COG3Q96JB2 828 aa28.84■■■□□ 2.21
YBX1-201ENST00000321358 NHSL1Q5SYE7 1610 aa28.84■■■□□ 2.21
YBX1-201ENST00000321358 GGNBP2Q9H3C7 697 aa28.84■■■□□ 2.21
YBX1-201ENST00000321358 MON2Q7Z3U7 1717 aa28.83■■■□□ 2.21
YBX1-201ENST00000321358 CNGB1Q14028 1251 aaPredicted RBP28.83■■■□□ 2.21
YBX1-201ENST00000321358 NUTM2GQ5VZR2 741 aa28.83■■■□□ 2.21
YBX1-201ENST00000321358 NSD2O96028 1365 aa28.82■■■□□ 2.2
YBX1-201ENST00000321358 CC2D1BQ5T0F9 858 aaKnown RBP28.82■■■□□ 2.2
YBX1-201ENST00000321358 NPC1L1Q9UHC9 1359 aa28.8■■■□□ 2.2
YBX1-201ENST00000321358 MORC1Q86VD1 984 aa28.79■■■□□ 2.2
YBX1-201ENST00000321358 PHLPP1O60346 1717 aa28.78■■■□□ 2.2
YBX1-201ENST00000321358 USP31Q70CQ4 1352 aa28.77■■■□□ 2.2
YBX1-201ENST00000321358 PLEKHG5O94827 1062 aa28.77■■■□□ 2.2
YBX1-201ENST00000321358 DIEXFQ68CQ4 756 aaKnown RBP28.77■■■□□ 2.2
YBX1-201ENST00000321358 ZRANB1Q9UGI0 708 aa28.77■■■□□ 2.2
YBX1-201ENST00000321358 NRKQ7Z2Y5 1582 aa28.76■■■□□ 2.19
YBX1-201ENST00000321358 HAP1P54257 671 aaPredicted RBP28.74■■■□□ 2.19
YBX1-201ENST00000321358 TRPM3Q9HCF6 1732 aaPredicted RBP28.74■■■□□ 2.19
YBX1-201ENST00000321358 ANP32CO43423 234 aa28.74■■■□□ 2.19
YBX1-201ENST00000321358 KCNH5Q8NCM2 988 aa28.73■■■□□ 2.19
YBX1-201ENST00000321358 JCADQ9P266 1359 aa28.72■■■□□ 2.19
YBX1-201ENST00000321358 COL16A1Q07092 1604 aaPredicted RBP28.71■■■□□ 2.19
YBX1-201ENST00000321358 MED1Q15648 1581 aaPredicted RBP28.71■■■□□ 2.19
YBX1-201ENST00000321358 PNPLA6Q8IY17 1366 aa28.71■■■□□ 2.19
YBX1-201ENST00000321358 TNNT2P45379 298 aaPredicted RBP28.69■■■□□ 2.18
YBX1-201ENST00000321358 RALBP1Q15311 655 aa28.69■■■□□ 2.18
YBX1-201ENST00000321358 OVOS2A0A0J9YW53 1432 aa28.69■■■□□ 2.18
YBX1-201ENST00000321358 OVOS2Q6IE36 1432 aa28.69■■■□□ 2.18
YBX1-201ENST00000321358 SOX12O15370 315 aa28.69■■■□□ 2.18
YBX1-201ENST00000321358 USP19O94966 1318 aa28.68■■■□□ 2.18
YBX1-201ENST00000321358 GCP02774 474 aa28.68■■■□□ 2.18
YBX1-201ENST00000321358 CABLES1Q8TDN4 633 aa28.68■■■□□ 2.18
YBX1-201ENST00000321358 PIK3C2AO00443 1686 aa28.68■■■□□ 2.18
YBX1-201ENST00000321358 ALS2Q96Q42 1657 aa28.67■■■□□ 2.18
YBX1-201ENST00000321358 PRKRIP1Q9H875 184 aaPredicted RBP28.64■■■□□ 2.18
YBX1-201ENST00000321358 KIF20BQ96Q89 1820 aa28.63■■■□□ 2.17
YBX1-201ENST00000321358 SPATA31A6Q5VVP1 1343 aa28.62■■■□□ 2.17
YBX1-201ENST00000321358 NUTM2BA6NNL0 878 aaPredicted RBP28.61■■■□□ 2.17
YBX1-201ENST00000321358 NUTM2EB1AL46 878 aaPredicted RBP28.61■■■□□ 2.17
YBX1-201ENST00000321358 ILDR2Q71H61 639 aa28.61■■■□□ 2.17
YBX1-201ENST00000321358 NUTM2AQ8IVF1 878 aaPredicted RBP28.61■■■□□ 2.17
YBX1-201ENST00000321358 PARD3Q8TEW0 1356 aa28.61■■■□□ 2.17
YBX1-201ENST00000321358 ZC3H6P61129 1189 aaKnown RBP28.59■■■□□ 2.17
YBX1-201ENST00000321358 AATKQ6ZMQ8 1374 aa28.58■■■□□ 2.17
YBX1-201ENST00000321358 ZBTB7CA1YPR0 619 aa28.58■■■□□ 2.17
YBX1-201ENST00000321358 SLIT3O75094 1523 aa28.57■■■□□ 2.16
YBX1-201ENST00000321358 FBLN1P23142 703 aa28.57■■■□□ 2.16
YBX1-201ENST00000321358 PPM1GO15355 546 aaPredicted RBP28.56■■■□□ 2.16
YBX1-201ENST00000321358 RRS1Q15050 365 aaKnown RBP28.56■■■□□ 2.16
YBX1-201ENST00000321358 MYBBP1AQ9BQG0 1328 aaKnown RBP28.55■■■□□ 2.16
YBX1-201ENST00000321358 PPP2R1AP30153 589 aa28.55■■■□□ 2.16
YBX1-201ENST00000321358 AMPHP49418 695 aa28.55■■■□□ 2.16
YBX1-201ENST00000321358 PRDM11Q9NQV5 511 aa28.55■■■□□ 2.16
YBX1-201ENST00000321358 COL22A1Q8NFW1 1626 aaPredicted RBP28.54■■■□□ 2.16
YBX1-201ENST00000321358 USP54Q70EL1 1684 aa28.54■■■□□ 2.16
YBX1-201ENST00000321358 ADAMTS2O95450 1211 aa28.53■■■□□ 2.16
YBX1-201ENST00000321358 ARHGEF25Q86VW2 580 aa28.53■■■□□ 2.16
YBX1-201ENST00000321358 MAP3K19Q56UN5 1328 aa28.53■■■□□ 2.16
YBX1-201ENST00000321358 PHF23Q9BUL5 403 aaPredicted RBP28.53■■■□□ 2.16
YBX1-201ENST00000321358 POLKQ9UBT6 870 aa28.53■■■□□ 2.16
YBX1-201ENST00000321358 ANKRD26Q9UPS8 1709 aa28.53■■■□□ 2.16
YBX1-201ENST00000321358 SHPRHQ149N8 1683 aa28.52■■■□□ 2.16
YBX1-201ENST00000321358 CPDO75976 1380 aa28.51■■■□□ 2.16
YBX1-201ENST00000321358 KIAA0232Q92628 1395 aa28.51■■■□□ 2.16
YBX1-201ENST00000321358 MTHFSP49914 203 aa28.51■■■□□ 2.15
YBX1-201ENST00000321358 EMILIN1Q9Y6C2 1016 aa28.51■■■□□ 2.15
YBX1-201ENST00000321358 MEX3CQ5U5Q3 659 aaKnown RBP28.49■■■□□ 2.15
YBX1-201ENST00000321358 CFAP53Q96M91 514 aa28.48■■■□□ 2.15
YBX1-201ENST00000321358 NFAT5O94916 1531 aa28.48■■■□□ 2.15
YBX1-201ENST00000321358 KIF24Q5T7B8 1368 aa28.48■■■□□ 2.15
YBX1-201ENST00000321358 CHRNA2Q15822 529 aa28.47■■■□□ 2.15
YBX1-201ENST00000321358 PHRF1Q9P1Y6 1649 aaKnown RBP28.46■■■□□ 2.15
YBX1-201ENST00000321358 IP6K1Q92551 441 aa28.46■■■□□ 2.15
YBX1-201ENST00000321358 MARF1Q9Y4F3 1742 aaKnown RBP28.46■■■□□ 2.15
YBX1-201ENST00000321358 FAM83GA6ND36 823 aa28.45■■■□□ 2.15
YBX1-201ENST00000321358 RTL1A6NKG5 1358 aa28.44■■■□□ 2.14
YBX1-201ENST00000321358 FLT4P35916 1363 aa28.44■■■□□ 2.14
YBX1-201ENST00000321358 HOXC9P31274 260 aa28.43■■■□□ 2.14
YBX1-201ENST00000321358 NGLY1Q96IV0 654 aa28.43■■■□□ 2.14
YBX1-201ENST00000321358 C8orf37Q96NL8 207 aa28.42■■■□□ 2.14
YBX1-201ENST00000321358 CRYBG1Q9Y4K1 1723 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms