RNA–Protein interactions for RNA: ENST00000319410.9

KARS-202, Transcript of lysyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KARS, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-202ENST00000319410 PRR36Q9H6K5 1346 aa13.37□□□□□ -0.27
KARS-202ENST00000319410 CABLES1Q8TDN4 633 aa13.37□□□□□ -0.27
KARS-202ENST00000319410 USP21Q9UK80 565 aa13.37□□□□□ -0.27
KARS-202ENST00000319410 SPATA31A3Q5VYP0 1347 aa13.36□□□□□ -0.27
KARS-202ENST00000319410 ARXQ96QS3 562 aa13.36□□□□□ -0.27
KARS-202ENST00000319410 RSPH6AQ9H0K4 717 aa13.36□□□□□ -0.27
KARS-202ENST00000319410 ARHGEF28Q8N1W1 1705 aaKnown RBP13.36□□□□□ -0.27
KARS-202ENST00000319410 PSME1Q06323 249 aa13.35□□□□□ -0.27
KARS-202ENST00000319410 NBPF8Q3BBV2 869 aa13.35□□□□□ -0.27
KARS-202ENST00000319410 RALGAPBQ86X10 1494 aa13.35□□□□□ -0.27
KARS-202ENST00000319410 ADGRB2O60241 1585 aa13.35□□□□□ -0.27
KARS-202ENST00000319410 WASLO00401 505 aaPredicted RBP13.34□□□□□ -0.27
KARS-202ENST00000319410 RGS12O14924 1447 aa13.33□□□□□ -0.28
KARS-202ENST00000319410 RBM6P78332 1123 aaKnown RBP13.33□□□□□ -0.28
KARS-202ENST00000319410 VSIG10Q8N0Z9 540 aa13.33□□□□□ -0.28
KARS-202ENST00000319410 TNS3Q68CZ2 1445 aa13.33□□□□□ -0.28
KARS-202ENST00000319410 ANKARQ7Z5J8 1434 aa13.33□□□□□ -0.28
KARS-202ENST00000319410 ROCK2O75116 1388 aaKnown RBP13.32□□□□□ -0.28
KARS-202ENST00000319410 HAP1P54257 671 aaPredicted RBP13.32□□□□□ -0.28
KARS-202ENST00000319410 FNBP4Q8N3X1 1017 aaPredicted RBP13.32□□□□□ -0.28
KARS-202ENST00000319410 TULP4Q9NRJ4 1543 aa13.31□□□□□ -0.28
KARS-202ENST00000319410 MARF1Q9Y4F3 1742 aaKnown RBP13.31□□□□□ -0.28
KARS-202ENST00000319410 BCL9LQ86UU0 1499 aa13.3□□□□□ -0.28
KARS-202ENST00000319410 RTL5Q5HYW3 569 aaPredicted RBP13.3□□□□□ -0.28
KARS-202ENST00000319410 NGDNQ8NEJ9 315 aaKnown RBP13.3□□□□□ -0.28
KARS-202ENST00000319410 CDK19Q9BWU1 502 aa13.3□□□□□ -0.28
KARS-202ENST00000319410 TRPC5Q9UL62 973 aaPredicted RBP13.3□□□□□ -0.28
KARS-202ENST00000319410 UPF1Q92900 1129 aaKnown RBP eCLIP13.3□□□□□ -0.28
KARS-202ENST00000319410 NUDT16Q96DE0 195 aaKnown RBP13.3□□□□□ -0.28
KARS-202ENST00000319410 PAK3O75914 559 aaPredicted RBP13.29□□□□□ -0.28
KARS-202ENST00000319410 AAMPQ13685 434 aa13.29□□□□□ -0.28
KARS-202ENST00000319410 EP400Q96L91 3159 aa13.29□□□□□ -0.28
KARS-202ENST00000319410 EIF3AQ14152 1382 aaKnown RBP13.29□□□□□ -0.28
KARS-202ENST00000319410 FKBP8Q14318 412 aa13.29□□□□□ -0.28
KARS-202ENST00000319410 SBNO1A3KN83 1393 aa13.29□□□□□ -0.28
KARS-202ENST00000319410 ATP7BP35670 1465 aa13.28□□□□□ -0.28
KARS-202ENST00000319410 CDK12Q9NYV4 1490 aaPredicted RBP13.28□□□□□ -0.28
KARS-202ENST00000319410 ATRNO75882 1429 aa13.28□□□□□ -0.28
KARS-202ENST00000319410 CARD11Q9BXL7 1154 aa13.28□□□□□ -0.28
KARS-202ENST00000319410 TRPM3Q9HCF6 1732 aaPredicted RBP13.27□□□□□ -0.28
KARS-202ENST00000319410 C11orf95C9JLR9 678 aaPredicted RBP13.27□□□□□ -0.29
KARS-202ENST00000319410 ABCA3Q99758 1704 aa13.26□□□□□ -0.29
KARS-202ENST00000319410 ARHGEF10O15013 1369 aa13.26□□□□□ -0.29
KARS-202ENST00000319410 CENPJQ9HC77 1338 aaPredicted RBP13.26□□□□□ -0.29
KARS-202ENST00000319410 NUTM2GQ5VZR2 741 aa13.25□□□□□ -0.29
KARS-202ENST00000319410 SRPK2P78362 688 aaKnown RBP13.25□□□□□ -0.29
KARS-202ENST00000319410 RBM10P98175 930 aaKnown RBP13.25□□□□□ -0.29
KARS-202ENST00000319410 UNC5CLQ8IV45 518 aa13.25□□□□□ -0.29
KARS-202ENST00000319410 KLHL34Q8N239 644 aa13.25□□□□□ -0.29
KARS-202ENST00000319410 GJD4Q96KN9 370 aaPredicted RBP13.25□□□□□ -0.29
KARS-202ENST00000319410 CABP2Q9NPB3 220 aa13.25□□□□□ -0.29
KARS-202ENST00000319410 SLIT2O94813 1529 aa13.25□□□□□ -0.29
KARS-202ENST00000319410 SBNO2Q9Y2G9 1366 aa13.25□□□□□ -0.29
KARS-202ENST00000319410 A0A0U1RQG5 324 aaPredicted RBP13.24□□□□□ -0.29
KARS-202ENST00000319410 FAM83GA6ND36 823 aa13.24□□□□□ -0.29
KARS-202ENST00000319410 ALS2Q96Q42 1657 aa13.24□□□□□ -0.29
KARS-202ENST00000319410 ITSN1Q15811 1721 aa13.24□□□□□ -0.29
KARS-202ENST00000319410 ACEP12821 1306 aa13.24□□□□□ -0.29
KARS-202ENST00000319410 TAF7LQ5H9L4 462 aa13.23□□□□□ -0.29
KARS-202ENST00000319410 CCDC9Q9Y3X0 531 aaKnown RBP13.23□□□□□ -0.29
KARS-202ENST00000319410 QRICH2Q9H0J4 1663 aa13.23□□□□□ -0.29
KARS-202ENST00000319410 PLCH1Q4KWH8 1693 aa13.23□□□□□ -0.29
KARS-202ENST00000319410 NBR1Q14596 966 aa13.22□□□□□ -0.29
KARS-202ENST00000319410 CCDC61Q9Y6R9 512 aa13.22□□□□□ -0.29
KARS-202ENST00000319410 GLI3P10071 1580 aa13.22□□□□□ -0.29
KARS-202ENST00000319410 TOPAZ1Q8N9V7 1692 aa13.22□□□□□ -0.29
KARS-202ENST00000319410 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.21□□□□□ -0.29
KARS-202ENST00000319410 BCL11BQ9C0K0 894 aaPredicted RBP13.21□□□□□ -0.3
KARS-202ENST00000319410 NOP58Q9Y2X3 529 aaKnown RBP13.21□□□□□ -0.3
KARS-202ENST00000319410 BTG4Q9NY30 223 aa13.2□□□□□ -0.3
KARS-202ENST00000319410 PPIP5K1Q6PFW1 1433 aa13.2□□□□□ -0.3
KARS-202ENST00000319410 PUS7Q96PZ0 661 aaKnown RBP13.2□□□□□ -0.3
KARS-202ENST00000319410 POLR3AO14802 1390 aaPredicted RBP13.19□□□□□ -0.3
KARS-202ENST00000319410 USP47Q96K76 1375 aa13.19□□□□□ -0.3
KARS-202ENST00000319410 PLEKHG3A1L390 1219 aa13.19□□□□□ -0.3
KARS-202ENST00000319410 CHRNA2Q15822 529 aa13.19□□□□□ -0.3
KARS-202ENST00000319410 CRYBG1Q9Y4K1 1723 aa13.19□□□□□ -0.3
KARS-202ENST00000319410 ATAD2Q6PL18 1390 aa13.18□□□□□ -0.3
KARS-202ENST00000319410 ZC3H6P61129 1189 aaKnown RBP13.18□□□□□ -0.3
KARS-202ENST00000319410 VPS72Q15906 364 aa13.18□□□□□ -0.3
KARS-202ENST00000319410 CABP1Q9NZU7 370 aa13.18□□□□□ -0.3
KARS-202ENST00000319410 EVC2Q86UK5 1308 aa13.18□□□□□ -0.3
KARS-202ENST00000319410 ABTB2Q8N961 1025 aa13.18□□□□□ -0.3
KARS-202ENST00000319410 PRDM11Q9NQV5 511 aa13.18□□□□□ -0.3
KARS-202ENST00000319410 SRCAPQ6ZRS2 3230 aa13.17□□□□□ -0.3
KARS-202ENST00000319410 A0A0G2JS52 829 aa13.17□□□□□ -0.3
KARS-202ENST00000319410 NWD2Q9ULI1 1742 aa13.17□□□□□ -0.3
KARS-202ENST00000319410 KIAA0232Q92628 1395 aa13.17□□□□□ -0.3
KARS-202ENST00000319410 SEPT12Q8IYM1 358 aa13.17□□□□□ -0.3
KARS-202ENST00000319410 NRAPQ86VF7 1730 aa13.16□□□□□ -0.3
KARS-202ENST00000319410 BRWD3Q6RI45 1802 aa13.16□□□□□ -0.3
KARS-202ENST00000319410 PHRF1Q9P1Y6 1649 aaKnown RBP13.16□□□□□ -0.3
KARS-202ENST00000319410 ST20-MTHFSA0A0A6YYL1 179 aa13.15□□□□□ -0.3
KARS-202ENST00000319410 FAM98CQ17RN3 349 aaKnown RBP13.15□□□□□ -0.3
KARS-202ENST00000319410 TESK2Q96S53 571 aa13.15□□□□□ -0.3
KARS-202ENST00000319410 COL14A1Q05707 1796 aaKnown RBP13.15□□□□□ -0.3
KARS-202ENST00000319410 EIF4G2P78344 907 aaKnown RBP eCLIP13.15□□□□□ -0.3
KARS-202ENST00000319410 STRN4Q9NRL3 753 aa13.14□□□□□ -0.31
KARS-202ENST00000319410 ZBTB7CA1YPR0 619 aa13.13□□□□□ -0.31
KARS-202ENST00000319410 FAM182BQ5T319 152 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms