RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 RALGAPBQ86X10 1494 aa25.38■■□□□ 1.65
TPM1-203ENST00000317516 BTG4Q9NY30 223 aa25.37■■□□□ 1.65
TPM1-203ENST00000317516 TRPM3Q9HCF6 1732 aaPredicted RBP25.35■■□□□ 1.65
TPM1-203ENST00000317516 CCDC125Q86Z20 511 aa25.35■■□□□ 1.65
TPM1-203ENST00000317516 PRDM11Q9NQV5 511 aa25.35■■□□□ 1.65
TPM1-203ENST00000317516 EVC2Q86UK5 1308 aa25.35■■□□□ 1.65
TPM1-203ENST00000317516 ABTB2Q8N961 1025 aa25.34■■□□□ 1.65
TPM1-203ENST00000317516 ONECUT3O60422 494 aaPredicted RBP25.33■■□□□ 1.65
TPM1-203ENST00000317516 ITSN1Q15811 1721 aa25.33■■□□□ 1.65
TPM1-203ENST00000317516 SEPT12Q8IYM1 358 aa25.33■■□□□ 1.65
TPM1-203ENST00000317516 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.33■■□□□ 1.65
TPM1-203ENST00000317516 PPIP5K1Q6PFW1 1433 aa25.32■■□□□ 1.64
TPM1-203ENST00000317516 NUTM2GQ5VZR2 741 aa25.32■■□□□ 1.64
TPM1-203ENST00000317516 CABP1Q9NZU7 370 aa25.31■■□□□ 1.64
TPM1-203ENST00000317516 ALS2Q96Q42 1657 aa25.31■■□□□ 1.64
TPM1-203ENST00000317516 BRD4O60885 1362 aaPredicted RBP25.3■■□□□ 1.64
TPM1-203ENST00000317516 TONSLQ96HA7 1378 aa25.3■■□□□ 1.64
TPM1-203ENST00000317516 NLRP13Q86W25 1043 aa25.29■■□□□ 1.64
TPM1-203ENST00000317516 A0A0G2JS52 829 aa25.28■■□□□ 1.64
TPM1-203ENST00000317516 ZC3H6P61129 1189 aaKnown RBP25.28■■□□□ 1.64
TPM1-203ENST00000317516 MYT1Q01538 1121 aa25.28■■□□□ 1.64
TPM1-203ENST00000317516 GLI3P10071 1580 aa25.27■■□□□ 1.64
TPM1-203ENST00000317516 NWD2Q9ULI1 1742 aa25.27■■□□□ 1.64
TPM1-203ENST00000317516 CARD11Q9BXL7 1154 aa25.26■■□□□ 1.63
TPM1-203ENST00000317516 KIAA0232Q92628 1395 aa25.26■■□□□ 1.63
TPM1-203ENST00000317516 ABCA3Q99758 1704 aa25.26■■□□□ 1.63
TPM1-203ENST00000317516 KRT27Q7Z3Y8 459 aa25.25■■□□□ 1.63
TPM1-203ENST00000317516 TRPM1Q7Z4N2 1603 aa25.24■■□□□ 1.63
TPM1-203ENST00000317516 CHRNA2Q15822 529 aa25.24■■□□□ 1.63
TPM1-203ENST00000317516 FAM98CQ17RN3 349 aaKnown RBP25.24■■□□□ 1.63
TPM1-203ENST00000317516 ZNF692Q9BU19 519 aaPredicted RBP25.24■■□□□ 1.63
TPM1-203ENST00000317516 SPATA31A5Q5VU36 1347 aa25.23■■□□□ 1.63
TPM1-203ENST00000317516 SPATA31A7Q8IWB4 1347 aa25.23■■□□□ 1.63
TPM1-203ENST00000317516 COL14A1Q05707 1796 aaKnown RBP25.23■■□□□ 1.63
TPM1-203ENST00000317516 PLCH1Q4KWH8 1693 aa25.23■■□□□ 1.63
TPM1-203ENST00000317516 TOPAZ1Q8N9V7 1692 aa25.23■■□□□ 1.63
TPM1-203ENST00000317516 EVA1CP58658 441 aa25.22■■□□□ 1.63
TPM1-203ENST00000317516 QRICH2Q9H0J4 1663 aa25.21■■□□□ 1.63
TPM1-203ENST00000317516 GCP02774 474 aa25.21■■□□□ 1.63
TPM1-203ENST00000317516 SF3B2Q13435 895 aaKnown RBP25.21■■□□□ 1.63
TPM1-203ENST00000317516 USP19O94966 1318 aa25.2■■□□□ 1.62
TPM1-203ENST00000317516 NLRP6P59044 892 aa25.2■■□□□ 1.62
TPM1-203ENST00000317516 STRN4Q9NRL3 753 aa25.2■■□□□ 1.62
TPM1-203ENST00000317516 USP6P35125 1406 aa25.19■■□□□ 1.62
TPM1-203ENST00000317516 BLMP54132 1417 aaPredicted RBP25.17■■□□□ 1.62
TPM1-203ENST00000317516 CPDO75976 1380 aa25.17■■□□□ 1.62
TPM1-203ENST00000317516 SPATA31A1Q5TZJ5 1347 aa25.15■■□□□ 1.62
TPM1-203ENST00000317516 SBNO2Q9Y2G9 1366 aa25.15■■□□□ 1.62
TPM1-203ENST00000317516 ZRANB1Q9UGI0 708 aa25.14■■□□□ 1.62
TPM1-203ENST00000317516 CRYBG1Q9Y4K1 1723 aa25.13■■□□□ 1.61
TPM1-203ENST00000317516 NRAPQ86VF7 1730 aa25.12■■□□□ 1.61
TPM1-203ENST00000317516 TTC21BQ7Z4L5 1316 aa25.12■■□□□ 1.61
TPM1-203ENST00000317516 SLC24A1O60721 1099 aa25.11■■□□□ 1.61
TPM1-203ENST00000317516 USP35Q9P2H5 1018 aa25.11■■□□□ 1.61
TPM1-203ENST00000317516 SSH2Q76I76 1423 aa25.11■■□□□ 1.61
TPM1-203ENST00000317516 TTC21AQ8NDW8 1320 aa25.11■■□□□ 1.61
TPM1-203ENST00000317516 PHRF1Q9P1Y6 1649 aaKnown RBP25.09■■□□□ 1.61
TPM1-203ENST00000317516 ZBTB7CA1YPR0 619 aa25.09■■□□□ 1.61
TPM1-203ENST00000317516 BARGINQ6ZT62 677 aa25.09■■□□□ 1.61
TPM1-203ENST00000317516 KCNH5Q8NCM2 988 aa25.09■■□□□ 1.61
TPM1-203ENST00000317516 LARP1Q6PKG0 1096 aaKnown RBP25.08■■□□□ 1.61
TPM1-203ENST00000317516 PUS7Q96PZ0 661 aaKnown RBP25.08■■□□□ 1.61
TPM1-203ENST00000317516 KTN1Q86UP2 1357 aaKnown RBP25.07■■□□□ 1.6
TPM1-203ENST00000317516 TCP11L2Q8N4U5 519 aa25.07■■□□□ 1.6
TPM1-203ENST00000317516 TMC1Q8TDI8 760 aa25.07■■□□□ 1.6
TPM1-203ENST00000317516 THRAP3Q9Y2W1 955 aaKnown RBP25.07■■□□□ 1.6
TPM1-203ENST00000317516 EP400Q96L91 3159 aa25.06■■□□□ 1.6
TPM1-203ENST00000317516 DEFB132Q7Z7B7 95 aa25.06■■□□□ 1.6
TPM1-203ENST00000317516 NRKQ7Z2Y5 1582 aa25.05■■□□□ 1.6
TPM1-203ENST00000317516 CPSF1Q10570 1443 aaKnown RBP25.05■■□□□ 1.6
TPM1-203ENST00000317516 BAG6P46379 1132 aa25.05■■□□□ 1.6
TPM1-203ENST00000317516 HDGFL2Q7Z4V5 671 aaPredicted RBP25.05■■□□□ 1.6
TPM1-203ENST00000317516 AATKQ6ZMQ8 1374 aa25.05■■□□□ 1.6
TPM1-203ENST00000317516 CAMTA1Q9Y6Y1 1673 aa25.04■■□□□ 1.6
TPM1-203ENST00000317516 PDE3BQ13370 1112 aa25.04■■□□□ 1.6
TPM1-203ENST00000317516 BRWD3Q6RI45 1802 aa25.04■■□□□ 1.6
TPM1-203ENST00000317516 FAM182BQ5T319 152 aa25.02■■□□□ 1.6
TPM1-203ENST00000317516 FAM196AQ6ZSG2 479 aa25.02■■□□□ 1.6
TPM1-203ENST00000317516 TERF2IPQ9NYB0 399 aa25.02■■□□□ 1.6
TPM1-203ENST00000317516 ST20-MTHFSA0A0A6YYL1 179 aa25.01■■□□□ 1.59
TPM1-203ENST00000317516 SLC12A5Q9H2X9 1139 aa25.01■■□□□ 1.59
TPM1-203ENST00000317516 ARHGEF25Q86VW2 580 aa25■■□□□ 1.59
TPM1-203ENST00000317516 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25■■□□□ 1.59
TPM1-203ENST00000317516 SLIT3O75094 1523 aa25■■□□□ 1.59
TPM1-203ENST00000317516 SOX12O15370 315 aa24.99■■□□□ 1.59
TPM1-203ENST00000317516 COL5A2P05997 1499 aaPredicted RBP24.98■■□□□ 1.59
TPM1-203ENST00000317516 TOM1L2Q6ZVM7 507 aa24.98■■□□□ 1.59
TPM1-203ENST00000317516 TIMELESSQ9UNS1 1208 aa24.98■■□□□ 1.59
TPM1-203ENST00000317516 TESK2Q96S53 571 aa24.97■■□□□ 1.59
TPM1-203ENST00000317516 THSD7AQ9UPZ6 1657 aa24.97■■□□□ 1.59
TPM1-203ENST00000317516 CRB1P82279 1406 aa24.96■■□□□ 1.59
TPM1-203ENST00000317516 LMO7Q8WWI1 1683 aa24.95■■□□□ 1.58
TPM1-203ENST00000317516 PCGF6Q9BYE7 350 aa24.95■■□□□ 1.58
TPM1-203ENST00000317516 AXIN2Q9Y2T1 843 aa24.95■■□□□ 1.58
TPM1-203ENST00000317516 CLSPNQ9HAW4 1339 aa24.94■■□□□ 1.58
TPM1-203ENST00000317516 C11orf95C9JLR9 678 aaPredicted RBP24.94■■□□□ 1.58
TPM1-203ENST00000317516 CSB-PGBD3P0DP91 1061 aa24.94■■□□□ 1.58
TPM1-203ENST00000317516 USP31Q70CQ4 1352 aa24.93■■□□□ 1.58
TPM1-203ENST00000317516 WDR17Q8IZU2 1322 aa24.93■■□□□ 1.58
TPM1-203ENST00000317516 PIK3C2AO00443 1686 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms